Basic Information

Insect: Campoplex nolae
Gene Symbol: -
Assembly: GCA_037893425.1
Location: JBBLXU010001720.1:637335-640898[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 9.9e-06 0.00083 19.7 0.7 1 23 324 346 324 346 0.98

2 11 1.3e-05 0.0011 19.3 0.3 1 23 354 377 354 377 0.97

3 11 4.8e-05 0.004 17.6 1.4 3 23 457 477 455 477 0.98

4 11 6.1e-07 5.1e-05 23.5 1.5 2 23 517 538 516 538 0.97

5 11 0.012 1 10.0 2.6 1 23 543 566 543 566 0.95

6 11 1.6e-06 0.00013 22.2 0.8 1 23 608 630 608 630 0.98

7 11 8.5e-07 7.1e-05 23.1 0.9 1 23 640 662 640 662 0.96

8 11 2.4e-06 0.0002 21.6 1.2 1 23 668 690 668 690 0.99

9 11 1.2e-05 0.001 19.4 0.2 1 23 696 718 696 718 0.98

10 11 0.0021 0.18 12.4 4.2 1 23 724 746 724 746 0.98

11 11 0.00045 0.038 14.5 0.3 1 21 752 772 752 773 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	9.9e-06	0.00083	19.7	0.7	1	23	324	346	324	346	0.98
2	11	1.3e-05	0.0011	19.3	0.3	1	23	354	377	354	377	0.97
3	11	4.8e-05	0.004	17.6	1.4	3	23	457	477	455	477	0.98
4	11	6.1e-07	5.1e-05	23.5	1.5	2	23	517	538	516	538	0.97
5	11	0.012	1	10.0	2.6	1	23	543	566	543	566	0.95
6	11	1.6e-06	0.00013	22.2	0.8	1	23	608	630	608	630	0.98
7	11	8.5e-07	7.1e-05	23.1	0.9	1	23	640	662	640	662	0.96
8	11	2.4e-06	0.0002	21.6	1.2	1	23	668	690	668	690	0.99
9	11	1.2e-05	0.001	19.4	0.2	1	23	696	718	696	718	0.98
10	11	0.0021	0.18	12.4	4.2	1	23	724	746	724	746	0.98
11	11	0.00045	0.038	14.5	0.3	1	21	752	772	752	773	0.94

Sequence Information

Coding Sequence: atgaatattaCAAATGATGATAAGACGGTAATAAATTCCGTCGTCAATTTGCAAGTATCGAGCAACGAGTGTCGCAtctgtttcgaaaaatgtaaccAAGTTTGGCAAATATTTCATCCTACCAACGAGGAGATACCTaggaaaataatggaattcgCTGCCGTACAGGTAGAAGAGGGGGACGGTCTGCCGACGACAATTTGTTACAACTGTCGTAGACTTTTGGACGTGTCGTATAGCTTCAAGCGACAGGTAGAGCAGTCGGACGCAAAATTTCGCAAGCTTCTGATGTTGAAAGAGATGagcgaggaggaggaggaggatgacgatgatgaaaacgaaaagatattGTCGTTGTCGCATTCGGTGAATGCGGCAATAGCGGAAGCGATAGCCGACGAAATAGCTCAAGAGCGAGGAGAAGATGGAGAAGGCGGAGAAAATGCGACGACCGGGTGTGCTGCGGAACTTGCGAGAACTTTGGGAGGGGAAGCCGGGAACCACGGGATGGTTCACGATTTGGGAGAACATCATTACGTGTCGCACGACGaaccgattatttttcaaattgagcCACCGCCCGATCACGAATGCGTTCTCGCGGAATCGTTGACGGATATGCGAAACGCAGTTTGCCAAGGAATCAGCGAGAGGAGGATGGAATTGAACGATTGCAGCGGTGAAAACGGATCGATGAATgtattgatcgaaaaatacacTAACGAGCTGGTGGATTCAAATTTGAACGGAGTAGTTTACAAATCGGAATCAACGATGATAACAGAATCGTCCGAGGAAGACGAGTGTAATTTTCAAGAAGAAGCCACGAGCCTCGAAGAAAATGAcccgaaaaatgaaaacttggaggagaaaaatttgatgaacgaTACGAATGGCAGGGAGGGGATTCGCAAAGAACGCTTCTCGAATGAGGATAAAGGGAAACCCCTATGTTCGAAAACGCAAAGGTTCAAATGCCCTAACTGCGTCAAGACATTCGGTACAAAAACCTCCCTCGATAGACACATCGAAATgcacaataaaaaaactaattcTCGTTATGCTTGCACGATGTGCGAAAAAAGATTTGTAAACATGGCCAATTTGGAGAACCATTTGCTaacgaatcatgaaaatcgcCGCTGCCGTCACGCTTGCGTCGAAAAGATTCATGAGCATAatgagggggaggaggaggaaaaggcaaaggagaacgagaacgaggacgaggacgaggacgacgacgacgacgacgacgacgatgacgatgacgacgacgacgacgatgcaGACGACGATGCAGACGACGATGCAAGAACGGAGAAACGAATTGGTACAtcggagagtaaaaaaagtacaaaatttgGCTGCAACGTTTGCGGTAAACAATTTACTTATCAAAAATCCTTTATGACTCACGCAAAAACTCATCCGGGCTACGAACCCGAAAGAATCGTTGAGAAagacgatgaaataaataacgttTGGGAGGTATCGAAGGAGCGTGGACGCGAATCCGAGGATGACGATTTACCGGTGGAAGGCTTGCAATGCACGCAGTGCGGCAAATTATTTGCAACGAAAAGAAATCTCAAGCGACACATATCCACTCACAGCGGTTTGAAGTTTCATTGTTCCGCTTGTAGCAAAGAATTTTCCAGGATCGACAAACTCAAAGAGCACGAACAATCCAAACACAAGGAAGAATTTTTCGCCTCTTCCGATTCGGATTCTGAAAACGATATTACCGACAACGAGAACAAACAGGAGGATGAAAGTGAGAAtagtagaaataataaaaaggaGAAGCATAATCGACCTCATCGATGCCCGATGTGTCCAAAGGCTTTCGCTCAAGAGCAATCTTTGAGAAACCACATGGAGCGCCATGAGCGAGTCAAAGATACGCAAAAGCGTTTTTTGTGCGAGGTGTGCAGCAAATGTTTCGCCCAGAGTGGCTCATTGGTCGCTCATATGCGAACGCATACGGGGGTAAAGCCGTACGTATGCAACGTGTGTAGCAGAGCGTTTACCAAGAGCACGTATCTTCAACTGCATTTGAGAACTCATAGCGGCGAAAAGCCTTATATATGTCAATACTGCAGCCGAGCTTTTGCACGGGCTAATACATTGGCGAGGCACATAACGATGCATACCGGAGAGGCGAAATATCATTGTCAAATTTGTATGAAATCGTTTCGTCGCTTGACGTCCTTGAACGAACATACCTATACTCATACGGGACAAAGACCTTACGCCTGTAAAATATGCACCAAGAGATACAACAACGCCGGTTCTCTCTATGCTCATACCAAAAAATGCAAAGCCCAGCAGCAATCCTCGGGAACGACAACGAACTTGGTTCTTCCGGTTGACGAAGCTATTCATCGGAACGATCCTCCTCAACCTCAGACGATGATTTACTCCCAAAGAAAATCGTCCGAACCTCCGTCCGTCGAACAAATCCAACCAACCCCTCCCCCCCAATTCATTATCTCAAACGTTCACAACCCTTCCCTCAAAGCGCTCCCCAATAATATTATCCCTCAATTTGCTCTTCAAGAGCCCAACTTTTGTCATCTCAACAATTCCAAGGCTTTCAAAAATCCTCCTTATTACACCATCTATCCGAACATGTAA
Protein Sequence: MNITNDDKTVINSVVNLQVSSNECRICFEKCNQVWQIFHPTNEEIPRKIMEFAAVQVEEGDGLPTTICYNCRRLLDVSYSFKRQVEQSDAKFRKLLMLKEMSEEEEEDDDDENEKILSLSHSVNAAIAEAIADEIAQERGEDGEGGENATTGCAAELARTLGGEAGNHGMVHDLGEHHYVSHDEPIIFQIEPPPDHECVLAESLTDMRNAVCQGISERRMELNDCSGENGSMNVLIEKYTNELVDSNLNGVVYKSESTMITESSEEDECNFQEEATSLEENDPKNENLEEKNLMNDTNGREGIRKERFSNEDKGKPLCSKTQRFKCPNCVKTFGTKTSLDRHIEMHNKKTNSRYACTMCEKRFVNMANLENHLLTNHENRRCRHACVEKIHEHNEGEEEEKAKENENEDEDEDDDDDDDDDDDDDDDDDADDDADDDARTEKRIGTSESKKSTKFGCNVCGKQFTYQKSFMTHAKTHPGYEPERIVEKDDEINNVWEVSKERGRESEDDDLPVEGLQCTQCGKLFATKRNLKRHISTHSGLKFHCSACSKEFSRIDKLKEHEQSKHKEEFFASSDSDSENDITDNENKQEDESENSRNNKKEKHNRPHRCPMCPKAFAQEQSLRNHMERHERVKDTQKRFLCEVCSKCFAQSGSLVAHMRTHTGVKPYVCNVCSRAFTKSTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYHCQICMKSFRRLTSLNEHTYTHTGQRPYACKICTKRYNNAGSLYAHTKKCKAQQQSSGTTTNLVLPVDEAIHRNDPPQPQTMIYSQRKSSEPPSVEQIQPTPPPQFIISNVHNPSLKALPNNIIPQFALQEPNFCHLNNSKAFKNPPYYTIYPNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01509065;
90% Identity: iTF_00265922;
80% Identity: -