Basic Information

Insect: Campoplex nolae
Gene Symbol: -
Assembly: GCA_037893425.1
Location: JBBLXU010002307.1:1491911-1494811[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.056 4.7 7.9 0.1 2 23 127 148 126 148 0.96

2 11 0.0044 0.37 11.4 3.1 2 20 213 231 212 232 0.94

3 11 5.9e-05 0.005 17.3 2.3 1 23 372 394 372 394 0.96

4 11 1.7e-05 0.0014 19.0 0.4 1 23 400 422 400 422 0.96

5 11 1.3e-07 1.1e-05 25.6 2.0 1 23 428 450 428 450 0.98

6 11 4.1e-05 0.0034 17.8 1.4 1 23 462 484 462 484 0.98

7 11 2.1e-07 1.7e-05 25.0 1.7 2 23 491 512 490 512 0.98

8 11 5.7e-07 4.8e-05 23.6 0.6 2 23 520 541 519 541 0.97

9 11 2.1e-06 0.00017 21.8 3.8 1 23 547 569 547 569 0.97

10 11 7e-05 0.0058 17.0 3.9 1 23 575 597 575 597 0.98

11 11 1.1e-05 0.00095 19.5 2.6 1 23 603 625 603 625 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.056	4.7	7.9	0.1	2	23	127	148	126	148	0.96
2	11	0.0044	0.37	11.4	3.1	2	20	213	231	212	232	0.94
3	11	5.9e-05	0.005	17.3	2.3	1	23	372	394	372	394	0.96
4	11	1.7e-05	0.0014	19.0	0.4	1	23	400	422	400	422	0.96
5	11	1.3e-07	1.1e-05	25.6	2.0	1	23	428	450	428	450	0.98
6	11	4.1e-05	0.0034	17.8	1.4	1	23	462	484	462	484	0.98
7	11	2.1e-07	1.7e-05	25.0	1.7	2	23	491	512	490	512	0.98
8	11	5.7e-07	4.8e-05	23.6	0.6	2	23	520	541	519	541	0.97
9	11	2.1e-06	0.00017	21.8	3.8	1	23	547	569	547	569	0.97
10	11	7e-05	0.0058	17.0	3.9	1	23	575	597	575	597	0.98
11	11	1.1e-05	0.00095	19.5	2.6	1	23	603	625	603	625	0.99

Sequence Information

Coding Sequence: atgttcattgttACGAAAGAAATTGATAGCGAGAATATAACGAAATTGTGTCGTACGTGCCTGCGAGAGGATggtgaaaaaatggtttgtcTTTTTTCGGGCCCTGCAGGCTCGTCTCTTGCTGCAAAACTACGAACTCTTTCGTGTCTCGAGGTGTGGCAAGGTGATGGCTTACCAGAAAAATTATGTGATCGGTGTGTTACCCGAGCCGAGTCAGCTTTATTATACAGAGAACAATGTCGAGCTGCGGATTTAGCTCTGAGACAAGCCGCTTCCAAGGTCTCTAGAGCTGCCGTGGATGCGACGATATCAGTTTCAAAGCTTTATTCCCatcaaaaaaacgatttcacgGCACTTGAAAATTCCCCAAAGTCCTTGAAATGTGCAGAATGCGAGGCACTGTTTTCAAACTATCAAGAACTCGGAATCCACACGAGGGGACATTTGCCGTTTGTGCAAGAGACTAGACCTGTACAACACATGGATATAGTGGAGTCTCAAAACACTTTGAGTTATATGACAACGACTGAAAGTGGAATCGGAAAAGCTTCAAGGGTATTAGCCAATACATTCgtcgattcaaatatttcggagACTGCTGCcacaacgaaaaatgatcgtgcATCTTGCGCTCTTCACTGTTCCCTTTGCAATCATACATTTACGAACAGAACGCAATTGATAAATCACCACGTGCCAACTCACTGTCACGAAAATGCTGAGAATTCATGCGACGAAGAGAATTTGACAGTATCAGAAAATCCGAAGATTCACGATCttgaaaatcgtgatttttctcgtacaatCGATCATCACAATTCGGTCCACAACGTTATAGAAAATTTGTCATATCCACAGGGAGATGAGACTACAATCGAAGCGATTAATTATTCGTCGCACATGGTACTGGAGCCTAGGAATATCATAAGCAACAAAGAATCGAGAAGAAACGTTAATTCACAGGATCAAATATCGAGCGATTTATCAAGCGAATCTTGCAACGATCATATACCGAGATATCCGAATTTCGAGGATGTCGAAATCCACGAAAGTGTCAacgagattttcaaaaatcctcTTGTCACCGATATCCCGGAAGCCTCAAAGCAGCAGCACAGATGCAACGTTTGCGAGAAAACATTTGCTCAAAGATCGAAACTCGTTTCGCACTCGCTCAGTCACACCGGCGAAAAGCCTTTTGCATGTCTCATCTGCGACAAGGCTTACACTTCGAGAAGCAAATTGAACGCTCATAATCGTTTGCACACCCAAACGAACGTCCATCGTTGCAACATATGCGACAAATCGTTTTCCTATCCCTCGTATTTGACCGAAcacttgaaaattcatgataaaacaaaaaatagtaatgCCACTAAAGAGTACGAATGCACTGTGTGTAGCAAGCAATTcagattgatgaaaaatttaaaaattcatttgcgaCTTCACACCGGCAAAGGTCTCGTCCGTTGTGAAATTTGTCACAAAGCATTCggacaaaaatacaatttaaaaGTTCATCTCAGAACTCACGGTGTCATaggaaaattcttgaaatgtAATTATTGTGGCAAAAGTTTTACAGCCAAAGGCAATTACATGGAACATTTGAGAATTCACACGAGAATCAAACCCTTCAAGTGTCGAATAtgcaacaaaactttttctcaatcgGGCCATCTTAAGACCCACGAATTATCCCACAATTCATCGAGACCACATCAGTGTCGATTGTGTGGAAAACGCTATAAACTTGCCGCTCATCTCAGGAGACAcgcgaacacacacacaagcaTCAAATCATACAAATGCGAACAGTGCAATCAATTGTTTTCACAAGCTTTCAGCCTTAAGAGACACCTGAAAAGACACAGTGAAGCACAAAtctaa
Protein Sequence: MFIVTKEIDSENITKLCRTCLREDGEKMVCLFSGPAGSSLAAKLRTLSCLEVWQGDGLPEKLCDRCVTRAESALLYREQCRAADLALRQAASKVSRAAVDATISVSKLYSHQKNDFTALENSPKSLKCAECEALFSNYQELGIHTRGHLPFVQETRPVQHMDIVESQNTLSYMTTTESGIGKASRVLANTFVDSNISETAATTKNDRASCALHCSLCNHTFTNRTQLINHHVPTHCHENAENSCDEENLTVSENPKIHDLENRDFSRTIDHHNSVHNVIENLSYPQGDETTIEAINYSSHMVLEPRNIISNKESRRNVNSQDQISSDLSSESCNDHIPRYPNFEDVEIHESVNEIFKNPLVTDIPEASKQQHRCNVCEKTFAQRSKLVSHSLSHTGEKPFACLICDKAYTSRSKLNAHNRLHTQTNVHRCNICDKSFSYPSYLTEHLKIHDKTKNSNATKEYECTVCSKQFRLMKNLKIHLRLHTGKGLVRCEICHKAFGQKYNLKVHLRTHGVIGKFLKCNYCGKSFTAKGNYMEHLRIHTRIKPFKCRICNKTFSQSGHLKTHELSHNSSRPHQCRLCGKRYKLAAHLRRHANTHTSIKSYKCEQCNQLFSQAFSLKRHLKRHSEAQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01509054;
90% Identity: iTF_01299476;
80% Identity: -