Basic Information

Insect: Campoplex nolae
Gene Symbol: su(Hw)
Assembly: GCA_037893425.1
Location: JBBLXU010004067.1:53434-56761[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0056 0.47 11.1 0.1 1 21 6 26 6 27 0.95

2 13 7.3e-06 0.00061 20.1 1.1 1 23 99 122 99 122 0.96

3 13 0.00067 0.056 13.9 4.3 2 23 129 151 128 151 0.95

4 13 0.00044 0.037 14.5 2.6 1 20 157 176 157 178 0.95

5 13 4.4e-09 3.6e-07 30.3 1.8 1 23 189 211 189 211 0.99

6 13 1.2e-05 0.001 19.4 0.8 2 23 221 242 220 242 0.97

7 13 0.0056 0.47 11.0 0.3 2 23 249 270 248 270 0.97

8 13 6.4e-06 0.00054 20.3 4.7 1 23 276 298 276 298 0.99

9 13 0.0001 0.0085 16.5 2.2 1 23 304 326 304 326 0.95

10 13 5.3e-06 0.00045 20.6 0.7 1 23 332 355 332 355 0.95

11 13 8.6e-08 7.2e-06 26.2 1.4 1 23 361 383 361 383 0.98

12 13 1.5e-07 1.3e-05 25.4 1.9 1 23 389 411 389 411 0.98

13 13 2e-05 0.0017 18.8 3.1 2 23 418 440 417 440 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0056	0.47	11.1	0.1	1	21	6	26	6	27	0.95
2	13	7.3e-06	0.00061	20.1	1.1	1	23	99	122	99	122	0.96
3	13	0.00067	0.056	13.9	4.3	2	23	129	151	128	151	0.95
4	13	0.00044	0.037	14.5	2.6	1	20	157	176	157	178	0.95
5	13	4.4e-09	3.6e-07	30.3	1.8	1	23	189	211	189	211	0.99
6	13	1.2e-05	0.001	19.4	0.8	2	23	221	242	220	242	0.97
7	13	0.0056	0.47	11.0	0.3	2	23	249	270	248	270	0.97
8	13	6.4e-06	0.00054	20.3	4.7	1	23	276	298	276	298	0.99
9	13	0.0001	0.0085	16.5	2.2	1	23	304	326	304	326	0.95
10	13	5.3e-06	0.00045	20.6	0.7	1	23	332	355	332	355	0.95
11	13	8.6e-08	7.2e-06	26.2	1.4	1	23	361	383	361	383	0.98
12	13	1.5e-07	1.3e-05	25.4	1.9	1	23	389	411	389	411	0.98
13	13	2e-05	0.0017	18.8	3.1	2	23	418	440	417	440	0.95

Sequence Information

Coding Sequence: ATGATCACTAGAAACTATCAGTGCGTAACATGCCAGCGTATTTTCCAAAATGAGGATATGCTGAGTGATCATCTGAATGTGTGCAGAGAAGAGGATGATAGCACAGATATTTTAGAATTGAAAACTTTCAACGATTATGATTCTGAGAGTTCCGAAGAATATGATGATTCCGACGCTGCTAACCAGAATGTGGAAGATGCGGATGAAGTCAGCGGTGGAAAAATACAGCCAGTTTCAGAAAACGAGTGTCACTGTTGCGGTGAAGATTTGAAATCTGCACATTCGGGTGGTCAATTCAAGTGTTCGAATTGCGAACtttcttttaaaaaacgttcttCTCTCGAGAGACATACGATCGTAATTCACTGGGTGATCGAATCGTGCAGCTGTACCGAGTGCGGTTCGACCTTTCGTGACAAAAAATCGTTAGATAAACATCGTTACACAACTCATTCCAATGCTAAGATTTACAAATGCGAACCTTGTGACCGGTATTTCACTCGTCGTTACCACTTGAATCGACACAAATTGCAATCCGGATGCCATGGAACCCTCCGTAATTTTTACGAGTGTCAAgTTTGTAACAAATCATTCACACGAAAGGACAATCTGCGTGAACATCTGAGAACCCACGCAGGAGTTCCACAACGTCAGCAAAAGTCATGCGATCAATGCGACAAAAAGTTCAGCACGCCGCAACAACTTCTGATCCACAGCAGAGTCCATACCGGCGAACGACCCGTCAAGTGTGATTTGTgtccaaaaacttttttgtccgcACTAGCAGTTAAGAAACATCGGCGAGTTCACACCGGAGAAAAGCCATTCCAGTGTAAACACTGTCAGCGCAAATTCGCAGCTCGTGAGACCCTCAACCGTCATCAGAGAACACACACCGGCGAAAGGCCTCACGTTTGCCAATACTGTGCCAAATCTTTCATCCAAGCTGCTCAGCTCAAGGCACATTTGTTTCATCACACCGGCGAGAATGGTTTCACTTGCGAAACTTGCGGTAAAGCATTCAATCGCAAAGCACGTCTCAATCTGCACATCAAATTCGCGCATGAAGGAGCGCCCGGATTTCAATGTGACATTTGCTCAAAATCTTTCACGCGCAAGGAGGATTTGACGAAACACACCCTCATCCATACGGGAGTGAAACCGCACAAATGCGACAAGTGCGAAAAAGCCTTCGCGACTAAATCCTCGCTCCAGGCTCATTTAAATACACACAGACGCGAGCCGCCCCAATCCTGTACCGAATGCGGACGCGCCTTTATACGCCACGACTGTCTCATGCGACACATCAGAGCGAAACATCGCCACGTTCTCGAAGACGTTATGGCCGAAGCCGAAAAACGACAACTCCAGACGCAACTCCTTGATATCGCTTCGTCCGCTGCTcttaaaatacaaaatggtGAATCCAGCGCCCTCTCCTCGTCACAACTACTCAAAGCTATTGCCGATCTTCTCAAGATTCTCATCGAAGACGAAACTTTGCAGATATTCGGATGGCCCGAAGCACCGATCCAAGACGTTTTGGATGCTGTGATCAGACGCTGCGGTCATCAACCAATCACGGTCGACGACAGCGATCTGATCTTCGAAGAACGTTTGCGCGAGAACGTTAAGCTTTTATTTACGGTCGTCATCGACGACGACACCGTCAAATCGCTCCTGACCACTCAAACCGTCGATGAGGTTATTTTACATGTactgaaaatatcgaaaacatga
Protein Sequence: MITRNYQCVTCQRIFQNEDMLSDHLNVCREEDDSTDILELKTFNDYDSESSEEYDDSDAANQNVEDADEVSGGKIQPVSENECHCCGEDLKSAHSGGQFKCSNCELSFKKRSSLERHTIVIHWVIESCSCTECGSTFRDKKSLDKHRYTTHSNAKIYKCEPCDRYFTRRYHLNRHKLQSGCHGTLRNFYECQVCNKSFTRKDNLREHLRTHAGVPQRQQKSCDQCDKKFSTPQQLLIHSRVHTGERPVKCDLCPKTFLSALAVKKHRRVHTGEKPFQCKHCQRKFAARETLNRHQRTHTGERPHVCQYCAKSFIQAAQLKAHLFHHTGENGFTCETCGKAFNRKARLNLHIKFAHEGAPGFQCDICSKSFTRKEDLTKHTLIHTGVKPHKCDKCEKAFATKSSLQAHLNTHRREPPQSCTECGRAFIRHDCLMRHIRAKHRHVLEDVMAEAEKRQLQTQLLDIASSAALKIQNGESSALSSSQLLKAIADLLKILIEDETLQIFGWPEAPIQDVLDAVIRRCGHQPITVDDSDLIFEERLRENVKLLFTVVIDDDTVKSLLTTQTVDEVILHVLKISKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01103723;
90% Identity: iTF_00439666;
80% Identity: -