Cnol004718.1
Basic Information
- Insect
- Campoplex nolae
- Gene Symbol
- ttk
- Assembly
- GCA_037893425.1
- Location
- JBBLXU010000994.1:1413733-1417058[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-14 1.6e-11 43.7 0.1 1 45 352 396 352 396 0.95
Sequence Information
- Coding Sequence
- ATGAGTTTCGCGCCGGATCAGCTGTTTTGTTTACGATGGAACAATCATCAGGCGAACATAGTCGAGGTGTTCGACAAATTGTTGGAGAACGAGACGTTCACGGACGTCACATTGGCGGTCGACAACggtgtttttgtaaaatgtcACAAAATGGTATTGGCGGCTTGTTCGAcctattttcaaagtttgttCACCGAGCTGCCTTGCACCCATCCGATCGTCGTACTAAAGGACATAAAGTACGCCGAGATCAAAGAAATCCTCGAATACATGTACACCGGTGAGGTCAAAGTCGCCAAGGAACATTTGACCCAATTCGTGAGAATCGCAAACATTCTTCAGGTAAAAGGTCTAATGGCCGACAGTACTTCGTTGACAATCTCAGAGCTGGTGACCCGCAACGACGAGGTCATAAGCACCAGCAAACTTAACAACCCAGCACAAATCTTCGAGAGCAACGGTCTCAACGCCGGACAATCGTCACCTCCGCACTCGACCAGCTCACCTTATTACGGATACAACAGATCGCCGACAAGACGAAATCAGCGATCGAATGTTCCTCTTCCAATGTGGCCACTCGTACCACCCGGACACAATTCTTCTCTCGATCTGGCCGCCCTCCAATCATCCCTCTCGATGAGACACTCGCTCTTCTCATCTCACTACGAGAACACTCGAGAAGCGACATTATCGAGCTCCCGAAGAACCAAATCTTCCGGTGGTAACGGCTCAACGAGAAATCACGATACGCCCATATTACGCACCGTTCTCGGTCAAGGTCACGTCGACAGCTCGATATCACACAGTCATTCCGATCCTCACGAGTATCGAAGTCACAGTAACGATTCGGCCAACAATGACAACGACGCCAGACGCACCAGTACGGATGCACCCAATCGTCCACCTTCTCATAGCCCATACGCCACAGATGCATCAGTCATGGAAGACGCTGATAGACAAACCTCACCTCCGTCACGCTCCGATGACGGCAGAAACGGCATAGCGAATTACGTGCCAACTCAAAGACCGGAATGGAAGCGTTACAAGCAGTACACCAGGGCCGACATATCAAACGCGATTGAGGCTGTAAGACACGGTATGAGCGCACTCCAGGCAGCCCGAAAGTTCGGCGTTCCCTCGAGGACCCTTTACGACAAAGTTAAGAAACTTGGTATAACGACGTCAAGACCCTTCAGACGCAGTTCAAACAGCAGTGGCGCTTGTTTCCCGTACGGTCTCGGTGGCAACGTTAACGGAAGTATTTACGGTACAGTTTCCGAAAGCGAGAACGACAACAGCAACGTACTGATGGATAATCCGGCTGCATTGCTCGAAACCGCTTTCGCTGAATCCCGTGAAGAATCGAGAGATCGCGAATCGATGATGGAAGTTCAACGAAACAGTCCGAGtccgctgccgccgccgccgcagcagcaacaaccaccgccaccgccaccgccacTCTACACCCATCGACCAATGTCGGCGGAAGGAATTTCGCATCAAGAAACGAGCGACGATGTTGAGGCACAAGTCGAAGATCTGTCGATCAATCGAAGATCCGATGTACGCGTCATAATGTCACCGAACGTCACGGTTAAAGaggaaaattga
- Protein Sequence
- MSFAPDQLFCLRWNNHQANIVEVFDKLLENETFTDVTLAVDNGVFVKCHKMVLAACSTYFQSLFTELPCTHPIVVLKDIKYAEIKEILEYMYTGEVKVAKEHLTQFVRIANILQVKGLMADSTSLTISELVTRNDEVISTSKLNNPAQIFESNGLNAGQSSPPHSTSSPYYGYNRSPTRRNQRSNVPLPMWPLVPPGHNSSLDLAALQSSLSMRHSLFSSHYENTREATLSSSRRTKSSGGNGSTRNHDTPILRTVLGQGHVDSSISHSHSDPHEYRSHSNDSANNDNDARRTSTDAPNRPPSHSPYATDASVMEDADRQTSPPSRSDDGRNGIANYVPTQRPEWKRYKQYTRADISNAIEAVRHGMSALQAARKFGVPSRTLYDKVKKLGITTSRPFRRSSNSSGACFPYGLGGNVNGSIYGTVSESENDNSNVLMDNPAALLETAFAESREESRDRESMMEVQRNSPSPLPPPPQQQQPPPPPPPLYTHRPMSAEGISHQETSDDVEAQVEDLSINRRSDVRVIMSPNVTVKEEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01299081;
- 90% Identity
- iTF_01508983;
- 80% Identity
- iTF_00266573;