Ccap009598.1
Basic Information
- Insect
- Campoplex capitator
- Gene Symbol
- nfxl1
- Assembly
- GCA_037576405.1
- Location
- JARBWI010000023.1:2747405-2751179[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1.1 1.3e+04 -3.3 1.1 15 19 135 139 134 139 0.81 2 21 0.21 2.5e+03 -1.0 0.8 4 10 170 176 169 176 0.94 3 21 2.8e-08 0.00033 21.0 16.6 1 19 184 201 184 201 0.99 4 21 0.0048 56 4.3 15.3 1 18 238 256 238 257 0.86 5 21 0.56 6.5e+03 -2.3 0.3 5 10 281 286 281 288 0.89 6 21 0.2 2.4e+03 -0.9 14.9 3 19 294 311 286 311 0.87 7 21 2.7e-05 0.31 11.5 10.1 1 18 354 371 354 372 0.97 8 21 0.0018 21 5.6 12.2 1 12 406 417 406 418 0.95 9 21 1.7 2e+04 -3.9 0.9 6 10 427 431 426 431 0.88 10 21 4.4e-07 0.0052 17.2 15.6 1 19 437 455 437 455 0.94 11 21 0.79 9.3e+03 -2.8 0.6 5 10 483 488 483 488 0.90 12 21 1.4 1.7e+04 -3.6 1.1 8 11 492 495 491 496 0.81 13 21 0.00032 3.7 8.0 5.9 9 19 503 513 501 513 0.90 14 21 0.008 94 3.5 8.0 1 12 523 533 523 533 0.95 15 21 0.87 1e+04 -3.0 5.8 14 18 560 564 560 565 0.89 16 21 0.19 2.3e+03 -0.9 0.5 6 10 591 595 590 596 0.85 17 21 0.00038 4.4 7.8 5.9 1 12 601 612 601 612 0.94 18 21 2 2.3e+04 -4.4 4.3 6 10 626 630 622 630 0.51 19 21 1.4e-05 0.17 12.3 13.3 3 19 639 655 638 655 0.94 20 21 6.8e-06 0.079 13.4 12.4 1 16 703 717 703 723 0.87 21 21 1 1.2e+04 -3.2 0.5 5 10 752 757 752 757 0.91
Sequence Information
- Coding Sequence
- ATGCGAAAATTCCTGCGAGCTCAGGCTCAAAATCAGGCATCGATACAAAAACATCTGACGGAACAACAGGCCAACAAAAGAGGAGCGTTGCTCGTTGACTCATCGTCGAGCGAGGAAGACGACAATGAAGAACGGGAACAAGCTTTGCAAATCGCCGTATCGAAAGTTGTCTCGTCCTACGAAGGCGAAGGCGGCGATACCGAAAAATCTCTCTCTTATCTTACCGACGTTTTTCAATCCGGCGGTGCTACTTGTCTCATTTGTATTTCGTCAGTTAAAAAAACTGATCCGATATGGAGCTGTTCTACGTGTTTCTCGTTCATGCATCTGGGCTGCATTCAGCACTGGATACACGACAGCCTCGGCTACAAACGGGAAAAAGGAATAAATCCTTTGTGGGCATGTCCGAAATGTCGAATGGAGTACACGGAAGAGGAGACGCCGAAAAGATACACTTGTTTCTGCGGGCAGACGACCGATCCGGCGTATCAGCCGTGGCTGATACCTCACTCGTGCGgagaaaaatgcgaaaaagcTTTGAAACCAGCGTGCGGTCATCGCTGTCTCCTTCTCTGTCATCCGGGGCCTTGTCCGCCTTGTCCAAAGATGTTGGAAGTGGGTTGTTTCTGCGGGAAAGAGCCGCCGCGGCCGCGGCGCTGCAACGCCAAAGAATGGAGCTGCGGTAAGGTTTGTTCGGCGAAATTGGCGGGTTGCGGGCACACCTGCAAAGAAGAATGCCATCCGAGGGAAAGCGGATGTCCGCCGTGTGCAGAGCTGGTTTCCTTGAAGTGTAACTGCGGCGCGGAGACAAGAGTCGGTAACTGCAGCGAGGGTGATTGGAAATGCGAAAAGCGGTGCGGCAGGATGTTCTCCTGCAAAGTTCACACGTGCGAAGGGCGCTGTCATCGCCCGGAAGATTGCGGGGAGTGTCCAGCAGGAAAAAAGCGTTCTTGTCCCTGCGGCAAGAAGCGTTATCCCGGGGTGACGtgcaaacgagaaaaagaggcGGGACCCGGAAGCCTGCCGACGTGCGGCGACACCTGCGGCAAACTACTCGATTGCGGCTCGCACTACTGCAACATGCGCTGCCACCCGGAACGCTGCGGCTCCTGCTTGGAGGTCGTAACGAAAAGCTGCCGATGTCGAAGCTACCTCAAAGAAATAGCTTGCGCCAAAGAGTTTCACTGCAACAAAAAGTGCGGTCGAATGCGGGCCTGCGGCAATCACACGTGCAACCGTAAATGCTGCGATTGCGAATCCCGAGGGATTCTCAATCAGTGCGACAAGCTGTGCGACAACACGCTCAATTGCCAGAAACACAAATGCCTCGCTCCCTGCCATCCCGGACCCTGCTATCCCTGCCCTCGCACCAACGTAATCCAGTGCCATTGCGGAAACAGCAAAATAACTGTCCCTTGCGGCAGAATAAAACGCATCAAGCCTCCGAATTGCAACAAACTATGCAAAACGCCTTCCGTATGCCACCACCCGAAACGGGAGTCCCACAAATGCCATTACGGTCTTTGTCCTCCTTGTCGAAAGATCTGCTCCCTCGTAAGGAAAAAATGCGGTCATCCTTGCACCGCGACTTGTCATACCAAAGTCTGGGTCAAAAGCGCTCCCAAAAATCCTGACCCCAATGCCCGAGACCCCGGTAGAATGCAACTTAAAACCTATCCCTGCCCACCCTGCGAAGTTTCCATCATGGTCACGTGTCTTGGCCAACACGAGACTATCCCCCTCGCCTGCCACGAGGCCAAACCCTACTCGTGCCAAAGACCCTGCGGACGAATCCTCAGCTGCACCAATCACACTTGCGAAATTCCCTGTCACAGTCTCCTCGGCGAAGATGATGAAATCGTCGATTGCCCGGAGTGCGAACGACCCTGCTCCCGCCCCAGACCCGACGGCTGCCAACATGCCTGCCCCAGGCAATGCCACGCGGGAAATTGCTACCCCTGCAAACAACTTGTTCGAGTTTCTTGCCACTGTGGCATCAACAATTTGTACAAACGGTGCGCTCAACTCACTTCCGTCGACACAATGACGGAAGATAAACGCCGGGAACTGCTACAGTGCGGAAATCAGTGCCCTAAGAACTATCCTTGCGGACATCGTTGCGTAGAAAATTGTCATCCTGGCGACTGTCCGAATCCGGAAGCATGCAGCAAAAGAGTTAAAGTTTGGTGTCCCTGCAAGAGGATaaagaaagattttctttGCATCGAAGTGCGCAACGGCAGAGCCCAGGTTCGCTGCGACAAAATTTGTCAGGaaataaaagaggaaaaagagagaataatcGAGATGGAAGCGGCGAGAAAACGGAACGAGGAACGAGCCAAACAACGCATCGAAGTTGAACGATTCGAGAGAAAGTTTAAACCCCGACGCAGAACTAAAGATTCGGGATCTTCGAATCAACCTCAACAACGAGATTCCGGCTATTTGCTCAAGAGAATCGCCCTCGTTCTCGCTGGCCTTGTCGTCGCCATTGCTTGGGCTATCTACCACACTAATCAACGGGCTTAA
- Protein Sequence
- MRKFLRAQAQNQASIQKHLTEQQANKRGALLVDSSSSEEDDNEEREQALQIAVSKVVSSYEGEGGDTEKSLSYLTDVFQSGGATCLICISSVKKTDPIWSCSTCFSFMHLGCIQHWIHDSLGYKREKGINPLWACPKCRMEYTEEETPKRYTCFCGQTTDPAYQPWLIPHSCGEKCEKALKPACGHRCLLLCHPGPCPPCPKMLEVGCFCGKEPPRPRRCNAKEWSCGKVCSAKLAGCGHTCKEECHPRESGCPPCAELVSLKCNCGAETRVGNCSEGDWKCEKRCGRMFSCKVHTCEGRCHRPEDCGECPAGKKRSCPCGKKRYPGVTCKREKEAGPGSLPTCGDTCGKLLDCGSHYCNMRCHPERCGSCLEVVTKSCRCRSYLKEIACAKEFHCNKKCGRMRACGNHTCNRKCCDCESRGILNQCDKLCDNTLNCQKHKCLAPCHPGPCYPCPRTNVIQCHCGNSKITVPCGRIKRIKPPNCNKLCKTPSVCHHPKRESHKCHYGLCPPCRKICSLVRKKCGHPCTATCHTKVWVKSAPKNPDPNARDPGRMQLKTYPCPPCEVSIMVTCLGQHETIPLACHEAKPYSCQRPCGRILSCTNHTCEIPCHSLLGEDDEIVDCPECERPCSRPRPDGCQHACPRQCHAGNCYPCKQLVRVSCHCGINNLYKRCAQLTSVDTMTEDKRRELLQCGNQCPKNYPCGHRCVENCHPGDCPNPEACSKRVKVWCPCKRIKKDFLCIEVRNGRAQVRCDKICQEIKEEKERIIEMEAARKRNEERAKQRIEVERFERKFKPRRRTKDSGSSNQPQQRDSGYLLKRIALVLAGLVVAIAWAIYHTNQRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00266866;
- 90% Identity
- iTF_00266866;
- 80% Identity
- -