Basic Information

Insect: Campoplex capitator
Gene Symbol: -
Assembly: GCA_037576405.1
Location: JARBWI010000012.1:371749-372975[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.7e-07 5.3e-05 23.8 1.5 1 23 18 40 18 40 0.97

2 9 1.2e-05 0.0013 19.4 2.2 1 23 46 68 46 68 0.98

3 9 0.0042 0.47 11.4 0.4 1 23 74 98 74 98 0.95

4 9 5.5e-05 0.0062 17.3 4.4 1 23 104 126 104 127 0.96

5 9 2.9e-05 0.0032 18.2 2.0 1 23 140 163 140 163 0.97

6 9 2.3e-05 0.0026 18.5 0.1 1 23 174 196 174 196 0.95

7 9 2.4e-07 2.7e-05 24.7 0.3 3 23 204 224 203 224 0.97

8 9 2.9e-07 3.2e-05 24.5 1.4 1 23 230 252 230 252 0.98

9 9 0.17 19 6.3 0.3 6 21 311 326 308 327 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.7e-07	5.3e-05	23.8	1.5	1	23	18	40	18	40	0.97
2	9	1.2e-05	0.0013	19.4	2.2	1	23	46	68	46	68	0.98
3	9	0.0042	0.47	11.4	0.4	1	23	74	98	74	98	0.95
4	9	5.5e-05	0.0062	17.3	4.4	1	23	104	126	104	127	0.96
5	9	2.9e-05	0.0032	18.2	2.0	1	23	140	163	140	163	0.97
6	9	2.3e-05	0.0026	18.5	0.1	1	23	174	196	174	196	0.95
7	9	2.4e-07	2.7e-05	24.7	0.3	3	23	204	224	203	224	0.97
8	9	2.9e-07	3.2e-05	24.5	1.4	1	23	230	252	230	252	0.98
9	9	0.17	19	6.3	0.3	6	21	311	326	308	327	0.92

Sequence Information

Coding Sequence: ATGACGAAGCTTTCGGAGCACTTGAAAAACGTTCACGGTATCGAGCGTGCTTTTCACTGCGACGAGTGCGGCAAAGCATTTCGTAATGCATCAAATATAAAGCGTCACAAGCTCATACATACAGGGATAAAGAAATTTGTATGCGACATTTGCGGTTGGTCCTGTAATCAAAAGAGCAATTTGGAGTTTCATCGACGTCGTCATGTCAAGGATTACGCTTACTATTGTGAGCTTTGTCGTAACAAAGGTTTTATATCTAAGAGCGAGTACGAGGATCACATGTTGAACGTTCATACCCAAAGAAAAATGTACCACTGCGAATTATGCTCGAGAACTTAtggttacaaaaaaaatttaaccgcTCATTTGAGAATTCATCACGCCGATATtggcaacgaaaaaataacagtTTTGAAGTACAATTGCAAATTGTGTACTCGAGGCTTCGTTTACGcgagattattgaaaaatcacatGAAAAAACGACACGGTATCGTGACAAAAACGAAcggcaaattatttttatgcgATTTTTGTGGAGCTCGAGTCTCCTCGAAAAAAGCTCTTGAAGCTCACATGAGAATTCACACCGGTGAGAAAATAGCTAATTGTGATATATGCGGAAAGGGCTTTGGCACGAAGGATAATCTCAGAATTCATCGACGCATTCATACCGGTGAAAAACCCTATAGATGTAACCAATGCGGCAAAGATTTCACTCAAAGAACGTCGCTCGTTGTTCATTTGCGTTATCACAACGAGGAGAGGCCTTATCAGTCTGCGAAATATCCGCCGGCAAATGCTTCGCCTGCCAAACACTTTTACGCACTCGCAACGTCACTCACACCGGTGAACGCAAATATTCGTGCGATCGGTGCGGCAAATCTTTCACTCAACGATCCACACTCGTTGTTCATAAACGATTGTCGTTGTGCTAAAGGCTTTGTCACCAGAACGGTACTCAAGACCCACATGAAATCTTGTCGTATTTAG
Protein Sequence: MTKLSEHLKNVHGIERAFHCDECGKAFRNASNIKRHKLIHTGIKKFVCDICGWSCNQKSNLEFHRRRHVKDYAYYCELCRNKGFISKSEYEDHMLNVHTQRKMYHCELCSRTYGYKKNLTAHLRIHHADIGNEKITVLKYNCKLCTRGFVYARLLKNHMKKRHGIVTKTNGKLFLCDFCGARVSSKKALEAHMRIHTGEKIANCDICGKGFGTKDNLRIHRRIHTGEKPYRCNQCGKDFTQRTSLVVHLRYHNEERPYQSAKYPPANASPAKHFYALATSLTPVNANIRAIGAANLSLNDPHSLFINDCRCAKGFVTRTVLKTHMKSCRI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00266659;
90% Identity: iTF_00266659;
80% Identity: -