Basic Information

Insect: Campoplex capitator
Gene Symbol: -
Assembly: GCA_037576405.1
Location: JARBWI010000040.1:569023-571969[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.054 6 7.9 0.1 2 23 127 148 126 148 0.96

2 11 0.0042 0.47 11.4 3.1 2 20 213 231 212 232 0.94

3 11 5.7e-05 0.0064 17.3 2.3 1 23 373 395 373 395 0.96

4 11 1.6e-05 0.0018 19.0 0.4 1 23 401 423 401 423 0.96

5 11 1.3e-07 1.4e-05 25.6 2.0 1 23 429 451 429 451 0.98

6 11 3.9e-05 0.0044 17.8 1.4 1 23 463 485 463 485 0.98

7 11 2e-07 2.2e-05 25.0 1.7 2 23 492 513 491 513 0.98

8 11 9.1e-07 0.0001 22.9 0.4 2 23 521 542 520 542 0.97

9 11 2e-06 0.00022 21.8 3.8 1 23 548 570 548 570 0.97

10 11 6.7e-05 0.0075 17.0 3.9 1 23 576 598 576 598 0.98

11 11 1.1e-05 0.0012 19.5 2.6 1 23 604 626 604 626 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.054	6	7.9	0.1	2	23	127	148	126	148	0.96
2	11	0.0042	0.47	11.4	3.1	2	20	213	231	212	232	0.94
3	11	5.7e-05	0.0064	17.3	2.3	1	23	373	395	373	395	0.96
4	11	1.6e-05	0.0018	19.0	0.4	1	23	401	423	401	423	0.96
5	11	1.3e-07	1.4e-05	25.6	2.0	1	23	429	451	429	451	0.98
6	11	3.9e-05	0.0044	17.8	1.4	1	23	463	485	463	485	0.98
7	11	2e-07	2.2e-05	25.0	1.7	2	23	492	513	491	513	0.98
8	11	9.1e-07	0.0001	22.9	0.4	2	23	521	542	520	542	0.97
9	11	2e-06	0.00022	21.8	3.8	1	23	548	570	548	570	0.97
10	11	6.7e-05	0.0075	17.0	3.9	1	23	576	598	576	598	0.98
11	11	1.1e-05	0.0012	19.5	2.6	1	23	604	626	604	626	0.99

Sequence Information

Coding Sequence: atgtttattgttACGAAAGAAATTGATAGCGAGAATATAACGAAATTGTGTCGTACGTGCTTGCGAGAGGATGGTGAAAAAATGGTTTGTCTTTTTTCGGGCCCTGCAGGCTCGTCTCTTGCTGCAAAACTACGAACTCTTTCGTGTCTCGAGGTGTGGCAAGGTGATGGATTACCAGAAAAATTATGTGATCGGTGTGTTACCCGAGCCGAGTCAGCTTTATTATACAGAGAACAATGTCGAGCTGCGGATTTAGCTCTGAGACAAGCTGCTTCCAAGGTTTCTAGAGCTGCCGTGGATGCGACGATATCAGTTTCAAAGCTCTATTCCCAtcaaaaaaacgatttcacgGCACTTGAAAATTCCCCAAAGTCCTTGAAATGTGCAGAATGCGAGGCACTGTTTTCAAACTATCAAGAACTCGGAATCCACACGAGGGGACATTTGCCGTTTGTGCAAGAGACTAGACCTGTACAACACATGGATATAGTGGAGTCTCAAAACACTTTGAGTTATATGACAACGACTGAAAGTGGAATCGGAAAAGCTTCAAGGGTATTAGCCAATACATTCGtcgattcaaatatttcggagACTGCTGCcacaacgaaaaatgatcgtgCATCTTGCGCTCTTCACTGTTCCCTTTGCAATCATACATTTACGAACAGAACGCAATTGATAAATCACCACGTGCCAACTCACTGTCACGAAAATGCTGAGAATTCTTGcgacgaagaaaatttgacaGTATCAGAAAATCCGAAGATTCACGATCTTgaaaatcgtgatttttctCGTACAATCGATCATCACAATTCGGTCCACAACGTTATAGAAAATTTGTCATATCCACAGGGAGATGAGACTACAATCGAAGCGATTAATTATTCGTCGCACATGGTACTGGAGCCTAGGAATATCGTAAGCAACAAAGAATCGAGAAGAAACGTTAATTCACAGGATCAAATATCGAGCGATTTATCAAGCGAATCTTGCAACGATCATATACCGAGATATCCGAATTTCGAGGACGTCGAAATCCACGAAAGTGTCAAcgagattttcaaaaatcctcTTGTCACCGATAATATCCCGGAAGCCTCAAAGCAGCAGCACAGATGCAACGTTTGCGAGAAAACATTTGCTCAAAGATCGAAACTCGTTTCGCACTCGCTCAGTCACACCGGCGAAAAGCCTTTTGCATGTCTCATCTGCGACAAGGCTTACACTTCGAGAAGCAAATTGAACGCTCATAATCGTTTGCACACCCAAACGAACGTCCATCGTTGCAACATATGTGACAAATCGTTTTCCTATCCCTCGTATTTGACCGAACActtgaaaattcatgataaaacaaaaaatagtaatGCCACTAAAGAGTACGAATGCACTGTGTGTAGCAAGCAATTcagattgatgaaaaatttaaaaattcatttgcgACTTCACACCGGCAAAGGCCTCGTCCGTTGTGAAATTTGTCACAAAGCATTCGgacaaaaatacaatttaaaaGTTCATCTCAGAACTCACGGTGTCATAGGAAAATTCTTGAAATGTAATTATTGTGGCAAAAGTTTTACAGCCAAAGGCAATTACGTGGAACATTTGAGAATTCACACGAGAATCAAACCCTTTAAGTGTCGAATAtgcaacaaaactttttctcaaTCGGGCCATCTTAAGACCCACGAATTATCCCACAATTCATCGAGACCACATCAGTGTCGATTGTGTGGAAAACGCTATAAACTTGCCGCTCATCTCAGGAGACACgcgaacacacacacaagcATCAAATCATACAAATGCGAACAGTGCAATCAATTGTTTTCACAAGCTTTCAGCCTTAAGAGACACTTGAAAAGACACAGTGAAGCACAAAtctaa
Protein Sequence: MFIVTKEIDSENITKLCRTCLREDGEKMVCLFSGPAGSSLAAKLRTLSCLEVWQGDGLPEKLCDRCVTRAESALLYREQCRAADLALRQAASKVSRAAVDATISVSKLYSHQKNDFTALENSPKSLKCAECEALFSNYQELGIHTRGHLPFVQETRPVQHMDIVESQNTLSYMTTTESGIGKASRVLANTFVDSNISETAATTKNDRASCALHCSLCNHTFTNRTQLINHHVPTHCHENAENSCDEENLTVSENPKIHDLENRDFSRTIDHHNSVHNVIENLSYPQGDETTIEAINYSSHMVLEPRNIVSNKESRRNVNSQDQISSDLSSESCNDHIPRYPNFEDVEIHESVNEIFKNPLVTDNIPEASKQQHRCNVCEKTFAQRSKLVSHSLSHTGEKPFACLICDKAYTSRSKLNAHNRLHTQTNVHRCNICDKSFSYPSYLTEHLKIHDKTKNSNATKEYECTVCSKQFRLMKNLKIHLRLHTGKGLVRCEICHKAFGQKYNLKVHLRTHGVIGKFLKCNYCGKSFTAKGNYVEHLRIHTRIKPFKCRICNKTFSQSGHLKTHELSHNSSRPHQCRLCGKRYKLAAHLRRHANTHTSIKSYKCEQCNQLFSQAFSLKRHLKRHSEAQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01509054;
90% Identity: iTF_01299476;
80% Identity: -