Ccap006399.1
Basic Information
- Insect
- Campoplex capitator
- Gene Symbol
- ZNF711
- Assembly
- GCA_037576405.1
- Location
- JARBWI010000012.1:331085-334134[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 7.2e-05 0.008 17.0 0.8 1 23 88 110 88 110 0.96 2 19 7.5e-07 8.4e-05 23.2 0.7 1 23 120 142 120 142 0.98 3 19 3e-06 0.00034 21.3 0.5 1 23 148 170 148 170 0.98 4 19 0.00016 0.018 15.8 0.9 1 23 175 198 175 198 0.98 5 19 1.4e-05 0.0016 19.2 0.8 1 23 204 226 204 226 0.98 6 19 0.00021 0.023 15.5 0.3 1 23 232 255 232 255 0.97 7 19 5.8e-05 0.0065 17.2 1.6 2 23 266 287 265 287 0.95 8 19 4e-05 0.0045 17.7 2.5 1 23 291 313 291 313 0.95 9 19 1e-06 0.00011 22.8 0.3 1 23 319 341 319 341 0.98 10 19 1.9e-06 0.00022 21.9 1.6 1 23 347 369 347 369 0.99 11 19 2e-05 0.0023 18.7 2.7 1 23 541 563 541 563 0.95 12 19 0.0025 0.28 12.1 0.7 1 23 568 591 568 591 0.97 13 19 8.2e-05 0.0092 16.8 1.1 1 23 599 621 599 621 0.98 14 19 2.1 2.4e+02 2.9 3.7 1 23 627 650 627 650 0.93 15 19 4.3e-05 0.0048 17.6 0.9 3 23 662 682 660 682 0.97 16 19 9.5e-06 0.0011 19.7 1.5 1 23 688 710 688 710 0.96 17 19 4e-08 4.5e-06 27.2 0.3 1 23 716 738 716 738 0.99 18 19 1e-07 1.1e-05 25.9 0.6 1 23 744 766 744 766 0.98 19 19 0.00053 0.059 14.2 1.7 1 21 772 792 772 793 0.96
Sequence Information
- Coding Sequence
- ATGTatcagctcgaaaaaatggaagTAATAAATAGATTTTCAATACTTTCAGACTTCACCGTCGACGATGATCCGCAGATGGAATTGGAAATCAAAGAGGAAGATAATACAGAAAAGATAGGAGAAGCTGATCCTTTGGCCATTGGATATGATTGTTCGATTGATTCGACGGAAAAGATCGTTTTACGAGCGAGGAACATCGGAGTggataaaagaagaagaagaagaagaaagagtgaaaagaaacgagaaaaaatagtttacGAGTGTGTGCCTTGCGGTTATAAATTTTCGCGCAGAGCCAAGTACGAGCGTCACATGAATTCGCACAACAGAAAAAAGCCTGATCCTAAGACTTTCGAGTGTGAAATATGCAAGGAGAGCTTTCCTCGAAAATCGGCATACAATAATCACATGCTGAAGCACACCAGCGATAAACCTCACAAATGTAATGTTTGCGGAAAAGGTTTTAAGAGGCCGTGGGAAGTGACCGGTCACATGAAGATCCACAGTGGTTCGATGTACACCTGCGAGATTTGTAACTTCGAGACGGCTTACAAGGTCTCGTTGAAAACACATCAGAGGCGTGTACACCAGAAGGACTATCCGTACAAGTGCGATAAATGCGAGAAGCCATTCATGTCGAAATACGAGCTCGAGGATCACTTGACGAGCCATCTCGGCACGAAGGATTTCATTTGTGAGATATGCGGAAACGCTTATTCCCAAAAGACTTATTTGCTTTATCACAAGCGTGTTATCCACGGTGTAAAAAATCGTGCTCCGAAGGAGCTCAAGTGCGAAATGTGCGACAAAACTTTCGCCTCGGAATACTGTCTACAGAATCACGTCAGTCttcattcacaaaaatttttgtgttcTCAGTGCGGTAAAGAGTTCGCGAGCAATCATTCCCTCAAAATGCACAGTCGTATGCACACGGGCGAACGTCCTTACAGTTGCAACGTCTGCCCAAAATCGTTTTCACGTTCGAACGCTCTCGCTGTACACAAACTCACTCATATCGGTGTCAGGCCTTATGTCTGTGACTTGTGCGACAAGAGCTTCACTCAGCGAACCACGATGATGGCGCACAGACGAAAACATCCCGGTAGTCATCCCCCACCGCCGCCCACCTCATTGAGCAAATACGAAAACGCTTTAGACTCGAGCTCGTTCATCTCGCCAGATCCGCTAGGGCCCGACTATCTGACGGTTAAGATAATGGACGATATCTATCGAATTCCAAAATCCAAGTGCTACATGGTATTGAATCATCCATCGATCGGGAACAAAGCTGTTTTGGATTCAACCCCATTAATGGAACTGGATAATATCACAAACGTTGGAATAGTCATGGAAAAAGATCCAGTTTTCGCTTCGCGCTCATCGATGAATTTGAGCAATATACCAATGGTGAAAATTGGTTGTCCTCTCGATATGGATATGGCAGCCGCTAAGCCAGTGAAGAAGAGAGGCAAACGTGGAAGAAAACCGGGTCCAGTtaaagcaaataaaaagacTCGGGGTAAAGAACAAACCAGAGAGAATCCTGAAAAAACCACGTTGGATGATTGCACTTGGGTGAAGACCGAGCCGGAAGAAGTtaaggaaaaagaatttttgtgcaCAACTtgcccaaaaaaatttcgtaccaATCGCGAGCTAAAGTCTCACGAAAAGACTCATTTGGAGCCACGTTTTTATTGCAACGAATGCGATTACAATACGACCGCGTTGTCCACACTCAGTATACACATGACGAGAAATCATCCGGACGAGGCCGACGCACCGTACCAGTGCACCCAGTGCCTCAAAAGATTTCGCAAAGCGATCGATCTTCAGGAACATTACAACATTCATTTGGGCGAAAAACCTTTCGCCTGTCAACGTTGCGGTAGCGCTTTTCACCTGAGACGTCAACTTTCTGCACATTGTCGCAAAGTACATCCCCGAAAGAAAGTCAGAATAACGAGCACCGCTTGCAACATTTGCGGACGCGTACTCTCATCAAGAAGATCGTTGTCACGTCACAAGCAAACTCACAATCCTACGAAGCTTTATCTGTGCGATTTGTGCGGCAAAAATCTCAGCAACGCCGAACATCTCAAAAAACACAGACGCATTCATACCGGTGAAAAACCGTACGTGTGCGACACCTGCGGCAAAGGTTTCACGGATTCCGAAAATTTGCGGCTTCATCAACGGGTACATACCGGTGAAAAACCCTACCAGTGTGATCAATGCCCAAAAGCTTTTTCACAACGTTCCACGCTCACCATTCATCAACGTGGTCATACGGGCGAGAGACCCTACGTTTGTCAAATCTGTCATCGTGGATTTTCCTGTCAGGGCAATCTCACCGCTCATCAGAAATCAACTTGTGTCTAA
- Protein Sequence
- MYQLEKMEVINRFSILSDFTVDDDPQMELEIKEEDNTEKIGEADPLAIGYDCSIDSTEKIVLRARNIGVDKRRRRRRKSEKKREKIVYECVPCGYKFSRRAKYERHMNSHNRKKPDPKTFECEICKESFPRKSAYNNHMLKHTSDKPHKCNVCGKGFKRPWEVTGHMKIHSGSMYTCEICNFETAYKVSLKTHQRRVHQKDYPYKCDKCEKPFMSKYELEDHLTSHLGTKDFICEICGNAYSQKTYLLYHKRVIHGVKNRAPKELKCEMCDKTFASEYCLQNHVSLHSQKFLCSQCGKEFASNHSLKMHSRMHTGERPYSCNVCPKSFSRSNALAVHKLTHIGVRPYVCDLCDKSFTQRTTMMAHRRKHPGSHPPPPPTSLSKYENALDSSSFISPDPLGPDYLTVKIMDDIYRIPKSKCYMVLNHPSIGNKAVLDSTPLMELDNITNVGIVMEKDPVFASRSSMNLSNIPMVKIGCPLDMDMAAAKPVKKRGKRGRKPGPVKANKKTRGKEQTRENPEKTTLDDCTWVKTEPEEVKEKEFLCTTCPKKFRTNRELKSHEKTHLEPRFYCNECDYNTTALSTLSIHMTRNHPDEADAPYQCTQCLKRFRKAIDLQEHYNIHLGEKPFACQRCGSAFHLRRQLSAHCRKVHPRKKVRITSTACNICGRVLSSRRSLSRHKQTHNPTKLYLCDLCGKNLSNAEHLKKHRRIHTGEKPYVCDTCGKGFTDSENLRLHQRVHTGEKPYQCDQCPKAFSQRSTLTIHQRGHTGERPYVCQICHRGFSCQGNLTAHQKSTCV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -