Ccap005122.2
Basic Information
- Insect
- Campoplex capitator
- Gene Symbol
- ttk
- Assembly
- GCA_037576405.1
- Location
- JARBWI010000008.1:6035102-6038448[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-14 2.1e-11 43.7 0.1 1 45 353 397 353 397 0.95
Sequence Information
- Coding Sequence
- ATGAGTTTCGCGCCGGATCAGCTGTTTTGTTTACGATGGAACAATCATCAGGCGAACATAGTCGAGGTGTTCGACAAATTGTTGGAGAACGAGACGTTCACGGACGTAACATTGGCGGTCGACAACGGTGTTTTCGTAAAATGTCACAAAATGGTATTGGCGGCTTGTTCGAcctattttcaaagtttattcaCCGAGCTGCCTTGCACCCATCCGATCGTCGTACTAAAGGACATAAAGTACGCCGAGATCAAAGAAATCCTCGAATACATGTACACCGGTGAGGTCAAAGTCGCCAAGGAACATTTGACCCAATTCGTGAGAATCGCAAACATTCTTCAGGTAAAAGGTCTAATGGCTGACAGTACTTCGTTGACAATATCAGAGCTGGTGACCCGCAACGACGAGGTCATAAGCACCAGCAAACTTAACAACCCTGCACAAATCTTCGAGAGCAACGGTCTCAACGCCGGACAATCGTCACCTCCGCACTCGACCAGCTCACCTTATTACGGATACAACGGATCGCCGACAAGACGAAATCAGCGATCGAATGTTCCTCTTCCAATGTGGCCACTCGTACCACCCGGACACAATTCTTCTCTCGATCTTGCCGCCCTTCAATCATCCCTCTCGATGAGACACTCGCTCTTCTCGTCTCACTACGAGAACACTCGGGAAGCGACATCATCGAATTCCCGAAGAACCAAATCTTCCGGTGGTAACGGCTCAACGAGAAATCACGATACGCCCATATTACGCACCGTTCTCGGTCAAGGTCACGTCGACAGCTCGATATCACACAGTCATTCAGATCCTCACGAGTATCGAAGTCACAGTAACGATTCGGCCAACAATGACAATGACGCCAGACGCACCAGTACGGATGCACCCAATCGTCCACCTTCTAATAGCCCATACGCCACAGATGCATCAGTCATGGAAGACGCTGATAGACAAACCTCACCTCCGTCACGCTCCGATGACGGCAGAAACGCAGGCATAGCGAATTACGTGCCAACTCAAAGACCGGAATGGAAGCGTTACAAGCAGTACACCAGGGCCGACATATCAAACGCGATTGAGGCTGTAAGACACGGTATGAGCGCACTCCAGGCAGCCCGAAAGTTCGGCGTTCCCTCGAGGACCCTTTACGACAAAGTTAAGAAACTTGGTATAACGACGTCAAGACCCTTCAGACGCAGTTCAAACAGTAGTGGCGCTTGTTTCCCGTACGGTCTCGGTGGCAACGTTAACGGAAGTATTTACGGTACAGTTTCCGAAAGCGAGAACGACAACAGCAACGTACTGATGGATAATCCGGCTGCATTGTTAGAAACCGCTTTCGCTGAATCCCGTGAAGAATCAAGAGATCGCGAATCGATGATGGAAGTTCAACGAAACAGTCCGAGTCCGCCGCCGCCGCAGCAGCAACAaccaccgccgccgccaccgccaccgccacTCTACACCCATCGACCAATGTCGGCGGAAGGAATTTCGCATCAAGAAACGAGCGACGATGTTGAGGCACAAGTCGAAGATCTGTCGATCAATCGAAGATCCGACGTACGCGTCATAATGTCACCGAACGTCACGGTTAAAGAGGAAAACTGA
- Protein Sequence
- MSFAPDQLFCLRWNNHQANIVEVFDKLLENETFTDVTLAVDNGVFVKCHKMVLAACSTYFQSLFTELPCTHPIVVLKDIKYAEIKEILEYMYTGEVKVAKEHLTQFVRIANILQVKGLMADSTSLTISELVTRNDEVISTSKLNNPAQIFESNGLNAGQSSPPHSTSSPYYGYNGSPTRRNQRSNVPLPMWPLVPPGHNSSLDLAALQSSLSMRHSLFSSHYENTREATSSNSRRTKSSGGNGSTRNHDTPILRTVLGQGHVDSSISHSHSDPHEYRSHSNDSANNDNDARRTSTDAPNRPPSNSPYATDASVMEDADRQTSPPSRSDDGRNAGIANYVPTQRPEWKRYKQYTRADISNAIEAVRHGMSALQAARKFGVPSRTLYDKVKKLGITTSRPFRRSSNSSGACFPYGLGGNVNGSIYGTVSESENDNSNVLMDNPAALLETAFAESREESRDRESMMEVQRNSPSPPPPQQQQPPPPPPPPPLYTHRPMSAEGISHQETSDDVEAQVEDLSINRRSDVRVIMSPNVTVKEEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01299081;
- 90% Identity
- iTF_01508983;
- 80% Identity
- iTF_00265845;