Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_037576405.1
Location
JARBWI010000003.1:7725494-7741830[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-17 1.2e-14 54.1 0.1 1 45 593 638 593 638 0.96
2 2 2.1e-17 2.1e-14 53.3 0.0 1 43 1037 1080 1037 1082 0.94

Sequence Information

Coding Sequence
ATGCTAACAGTTTTTATAACGTACGAGGGGACAATTTGCGGTGGTGTCGCAGGTCTGGAACGGGTAGCGGAAGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCAGCACTCGGAGCGAATCAGCAAATCAGccccatcatcatcatcggctGTATCCGGGTACTGCTCTTTCGAGTTCTTGCAACGTCGTAACGGTAGGTGGTGGTGGTGTTGGAGGCGGAggcggaggaggaggaggaggaggaagcaTTGCTCAGCAGGTGGTAGCTCAACGTTCGCCATCGGCGATCGGGGAAATCGGTTTGGTCCAGGGAGCTTCGACGATCGAGGTAACCTCGTTGGGTACGTCGAACGCGACGACAATACCAGCTACAACGGGAACAACGACGAGCTCGAGTGTTCTAAGAACGGAAacgacgtcgacgacgacgacgaccgggAGTATCTCGTTGACAAACGATTCGTCGTCGGGAACGACGACTACCTCGTCGCCGacggagaaaaaattaaattgtttGCAGCAAAGAAGCTCGTTGAATCAATTGTCGAATCATCGAGGAAACAcgaacgacgacgacgaagacgacgaaaACGAGAACAACCTCAACGAGGATCACGAGGATCACGAAAATCTCGATCTCCAACAATCCTCTCGTCTCAGGCCCGAAGGTATAAAACTCGAGATCGACGAGATCAACGACTCGCTTCTCAGGGAATCTCATCCTGGGAGCTGCGTTATCTCAAGGCAAACGAACAACAATATACAGGAACAATTAGCTACCTCCCGAGGAAAATTCATCAAGCACGAGGGACGGGAATATCCGGATACGGAAAACGGCGATCATATCGAAGATCTCAATACCGATTCCTCCGAAAAGAGATTGAAGATACTCGAGGATTTGTCCTCACGACAGAATTCCACTCGACAAACAACCGGACTATCTCCGGTTCTTGTCAGCCCACTCAGGGAAAACGAGACGAGGACATCGTCCAGAGAACAGGAGACTGGAACGAACGATCTCGTCGATACGATAGAGAACAAGaCCGAGGAACGGATAGAAGCACCGACGACCGGTCTGCTGAGGGTAAAGAAAGAGGAGGAACTCCAGGAGGCACCGCGCTCAATAAGCTGCGGTGTCAATGCTTCGAGCATCACGAGATTAGGAAATATCGTCGATACGACCAATTCGGAAGTTTACAAAGTTACGGAACAAACAGCCCCCGATACGGGCTTACCGTATCTCGTAAATCGACGCACGAGCCCACCTCCCGAGGACTGGAAGCCACTCGACAAGTGTTTCTTTTGTCTAGATGGAAAACTTCCCCACGACGAACAGCCACCCCTTAGTCCTCAAAGCGAGAGTAGCAGTAGTTCACGATCGGCAGAGTCACCGATGTCGGTACAGGTTGATCCTATGGCGGCTTCGGTTGTCGCTGCTGCCCTTAGCGGTACTTATCCGACTCTACTGCCACAGTGGTGTCTACCGCCAAGGGAATCACCCCTCGTCGCCGTTCAGAGCCATCAGGATGGCTCGTCCGGAGTCGATCAACCCCTCGACCTTTCGGCCAAGCCGAAAAACTTTCAGGACAACCATGTGACGATGGCGAAGCAACAGAAAATACCTCTGAGGATGCCAACGGGCATTGATCCCAAGAGCATCTTCACCTCGTCATATCGTGCTAAGCCACGAATGACCGGACCAGTTGGTGTCGGTGGTGTTCCGGTGGTTGGTGCTGGCGGGAGTAGGAGAACGTACACCGAGGAAGAGCTCCAAGCCGCACTGAGGGACATACAGAGCGGTAAACTTGGGACACGTCGAGCAGCCGTTATCTACGGAATACCTCGGAGCACTTTACGGAACAAGGTGTACAAGCTCGCGATGGAGCGTGAACGGGACGCGACCCTGAATAGCACCCATTCACACCCCCTCGAGTCCGGTGCCCAAGCCTCAACTACCACCatgacaacaacaacaacatcaacaacaacaacaatatcaacaacaacatcaacaacaacaatatcaacaacaagaacaacatcaacaacaacaCCATCACCAAATACGATCCAAAACGCCTCCGCAACCACTCCGCCCCCGCAAGTGGATGAGGTTGAGGATAAGGATCTTTCGGGTGCggaggaggaaaaagaagtGGAAAAAGCACTGCTCAGGCCTCTGCTGTCGCTCGAAGATCTCGTCAGGTTTTCTGCTCTCGAAGGAAGTGGCAGCGATTCCTTAAGGTCTCTGCTACAACGAGGTCAAGAGACTGGAACCGAATGGCCCGGTTTCGAGCACGCGAACATTGGACCTTACATCCAAAAGATGCTCGGAGCTGCAGCCCCTTTTAAGGGTTTAGAAACTCCGGATTATAGAATTCCGGAAGTGATGAGGCGGTTGATGAGCGAGGACAAGAGATTGAACAAGGACGTGAACGGCGATCATATGCAGCAACTCCATCATCACCTGCATCATTCGCAACAGCAGCATCATCACCATCAGCATCATCAGTCACCTCATCAACAAGCGGTGCAACAGCAATCAGGGCAGCACAGAGGACCAATAACGAACGAGGATTTCAATCCGAGTATAGAGGAAGAAGCGAGTGACAGCGGCCAGGGCAGAGCGATATTAAAGATTCCGTCCTACAAGCCGGCGAGTAGTACACCAGGTTCGAGCAAAAACAACGGGGAGCCAAATTCGGCAGCATTTGCCCAAAGTTTCGCAACGAGTGCAGCCGGAAGTCCGGTACTTTTGGACCGCACGAGTCCAGCATTTTCCGGGACGAGCAGTCCAACGAATTCTATCGTTGGCAAAGGGGTTGGCGTTAATTTTCGTGACGTTATCGCTAAAAGCATAAGCGTCAAGTTTCAAGAGGGACAATCCGGTCTCGGTGGACAAACCGGTAGCATGGTTCACAGTCCAACAGCTATGATGACCGAGAGCAATCCCTTCAAGAGGGGAAGATACACCCCGCCACAAACTTCCCAATCCCAGCAACCTAAACCACAATCCCAACAGGACAAATCCAAACCGAACGCTGGTGGCAAAGGCACCAGACCTAAGCGAGGCAAATACAGGAACTACGACAGGGATAGCCTCGTCGAAGCTGTCAGAGCTGTTCAACGAGGTGAAATGAGCGTACACAGAGCTGGTAGCTTTTACGGCGTACCCCATTCTACTCTTGAGTACAAGGTCAAAGAGCGACATCTTATGAGACCAAGAAAAAGAGATCAGAAACAGCCGGACGATAAATCAAAAGACTCTTCGGGCGGGGGAAGTTCAATGCGTTCGAGTCTGGCGGACAAGAAACCACAACTGAAGCCCCAGAAAGCGTTCGCGAGCTCGCCAGGAGGGATGCCAGGTGGGCCGAACGGTTTAAAAATGCCACCGTTTCTGGAGGGAATGGCGCCTCTGCCGTTTACCCATCCCTTCAATTTCTGGGGACCGACGCCGTTCATGCCATCGCCGTTCATGCCGGGTGGTCCGAACGTACCGACGATTTTGCCCGAGCAGTATTTCGCGACTCAGAGGATGCGTGGGTTGCAGGAACACCAAAGGAGCGCGATTgtacagcagcagcaggctCAACGAGAACGGGACGGAATCGCTGGGAGCGGTGGAAGTGGCGGAGGTGGAGGTAGCACAGAACCAGGAACGTCGAATTCCCGAGGCTCCTCGATGGTAAAATCGACGAGAGAAATAGCTGAGAGTCTGTACGACGGTACGGGAGCAAATGGAAGTTTTCTCGACAATCTCATTAGATCGAGCCTCGAAACGGGCATACCGAGGGATCAACGAGCAATGGCAGAGGCACGCAGCAaccagcaacagcaacaacagcagcagcagcagcaacaacaacaacaacaagcaCAACAACAAAACTCTgcgcaacagcagcagcaacgcgAACGCGAGAGAGACCAACGAGAACGTGATCATCTGCCTGAAGCCATGAGCAGCAAAGCTCTGATCGATCAATTGTGCCGAAATTCACGACGTACACCATTGCCAAGAATGACTCACGACAGCAGCGAAGACGAGAGTTACCGAGGCTCGAGCACTCGAACCTTACCCGATCGACCGGAAAGAGTACCAACGGTCGATCTCAGCCAATCACCCACCGACAGATCCAGAATCGATGAGCAGTGCAACGATCGCTTGACCTCTCCACCCACTCCCATGTCCATCACCAGAACCGGTAGCAGAGACGAGGACAATACGAGAGAATCCATGAGGCTTCTTGATCGCGCTAGTAGAGAAAGGGAGATTCACAACGGCGGACAACAGCAGGAGGATCGAGAGCATAGGAAAACACACGGGAGTATGCAGTCCCAACAGATCAATCATTATCCGGAAATGCATAGTCTCTATCCCGTctcaaatgacaaaaaaagtgCCTGTGATAGTAAGCTTATAGTTGATCATTCGAGCCAGAAAACTCAACAACAGCACAAAGATCTTGGGAACGTTGGTGGCCTCGTTGTACAACTTCAAAGGGGTTACAATACCTCGTCGAGTCGAAACTCAACGACGACCTCTCCAACCACGACATCTGCAGCCGTCAACGAACAATCCCAAAATAATACTCTTTCGAATACCACCGGTCAAGTCAACACCGGAGCACACGAGCAACGAGGATCCGCTGTTCTCCCAATGGAAGAATCCGTAGAGCAGTAA
Protein Sequence
MLTVFITYEGTICGGVAGLERVAEELMGRRRWKQYQDTLYSSTRSESANQPHHHHRLYPGTALSSSCNVVTVGGGGVGGGGGGGGGGGSIAQQVVAQRSPSAIGEIGLVQGASTIEVTSLGTSNATTIPATTGTTTSSSVLRTETTSTTTTTGSISLTNDSSSGTTTTSSPTEKKLNCLQQRSSLNQLSNHRGNTNDDDEDDENENNLNEDHEDHENLDLQQSSRLRPEGIKLEIDEINDSLLRESHPGSCVISRQTNNNIQEQLATSRGKFIKHEGREYPDTENGDHIEDLNTDSSEKRLKILEDLSSRQNSTRQTTGLSPVLVSPLRENETRTSSREQETGTNDLVDTIENKTEERIEAPTTGLLRVKKEEELQEAPRSISCGVNASSITRLGNIVDTTNSEVYKVTEQTAPDTGLPYLVNRRTSPPPEDWKPLDKCFFCLDGKLPHDEQPPLSPQSESSSSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPRESPLVAVQSHQDGSSGVDQPLDLSAKPKNFQDNHVTMAKQQKIPLRMPTGIDPKSIFTSSYRAKPRMTGPVGVGGVPVVGAGGSRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDATLNSTHSHPLESGAQASTTTMTTTTTSTTTTISTTTSTTTISTTRTTSTTTPSPNTIQNASATTPPPQVDEVEDKDLSGAEEEKEVEKALLRPLLSLEDLVRFSALEGSGSDSLRSLLQRGQETGTEWPGFEHANIGPYIQKMLGAAAPFKGLETPDYRIPEVMRRLMSEDKRLNKDVNGDHMQQLHHHLHHSQQQHHHHQHHQSPHQQAVQQQSGQHRGPITNEDFNPSIEEEASDSGQGRAILKIPSYKPASSTPGSSKNNGEPNSAAFAQSFATSAAGSPVLLDRTSPAFSGTSSPTNSIVGKGVGVNFRDVIAKSISVKFQEGQSGLGGQTGSMVHSPTAMMTESNPFKRGRYTPPQTSQSQQPKPQSQQDKSKPNAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKDSSGGGSSMRSSLADKKPQLKPQKAFASSPGGMPGGPNGLKMPPFLEGMAPLPFTHPFNFWGPTPFMPSPFMPGGPNVPTILPEQYFATQRMRGLQEHQRSAIVQQQQAQRERDGIAGSGGSGGGGGSTEPGTSNSRGSSMVKSTREIAESLYDGTGANGSFLDNLIRSSLETGIPRDQRAMAEARSNQQQQQQQQQQQQQQQQAQQQNSAQQQQQRERERDQRERDHLPEAMSSKALIDQLCRNSRRTPLPRMTHDSSEDESYRGSSTRTLPDRPERVPTVDLSQSPTDRSRIDEQCNDRLTSPPTPMSITRTGSRDEDNTRESMRLLDRASREREIHNGGQQQEDREHRKTHGSMQSQQINHYPEMHSLYPVSNDKKSACDSKLIVDHSSQKTQQQHKDLGNVGGLVVQLQRGYNTSSSRNSTTTSPTTTSAAVNEQSQNNTLSNTTGQVNTGAHEQRGSAVLPMEESVEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2