Basic Information

Gene Symbol
ct
Assembly
GCA_037576405.1
Location
JARBWI010000028.1:2391527-2409080[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-27 6.9e-24 84.0 0.0 2 72 532 603 531 608 0.95
2 3 2.1e-32 1.2e-28 99.2 0.0 2 77 942 1018 941 1020 0.96
3 3 1.8e-31 1.1e-27 96.2 0.0 3 76 1190 1264 1188 1267 0.96

Sequence Information

Coding Sequence
ATGAGAATCCGAGTAAAGCTCCTTATATTACGAAAACTCCGTGGGAAATTGGTCCAGGTCGCATCTTATCAGTTGATCAGTCGATTGGTCGAAGAGGTTTCGAGGTTACAGCAAAGCCTGCAGCGTCTTCAGGAAACGAGCTCGCAGACGGCGTCGCGCCTCGAGGAGGAGCTCGAGGCACGACGACAGCACACCGCACGCTTGGAGAGCAAACTCGAGCGTCAGCGCGACTACGACGATATCAAGCGTGAGATAAGCATTTTGAGATCGGTAGATTTGTCGCAAATACCTACCGGTGAACCCGGCAAAAGCCTCGAACATCTCCTAATGGAAAGGTCCAAAGCGTTACAACAAGCCGAAACACTCAAACCTCCGAGCACTCCCGATGCACTCGGTGGACTAGCCTCACCCCTTCAGCGCACCGCGACCGCTTCACCCCACGCTCTTGGTGGTGGTGTAGGTGGTGCTGGCGGTGTCGTGATTGGTGGGAGTGCTGCACAGCCACCCGCGTCCCTCGTCTCCTGTTCCCAACAAGCAATCCCGAGTCGGTCGACTCCGACACCCTCGTCGGCAACTTCTACCGCCTCGAGCCTCCTATTCCCGCTACCTCTCCAGAATGTCGAAATCTTTGGCTCTTTCCTCGGCGAGGAGATCGTCACCAAGTGGAGGCGGTCCTCGGAAATCAtgaaacagcagcagcaacagcaccACCAACAACAGCATCAACATCAAGCCCAACAAGCCCAACAAGCCCAACAACAACATCCTCAGCAACAACAGTCGCAACTACAGCAACAAGCATTACCGTTACAATCACAAAATCAAGCTCTCTCCCAGCTCCAGCAGTCACAGCCCGTTGTAgcagctgctgctgctgttgcggTGCATCAAGCACTCCAACAGCAACAATCGATGCACTCGTTGCATCAATCGACAACAACGAACCTAAATCACCTTCCATCGCCAACAGATAATCCATCGTCATCGGCCTCGTTAACGAACACACCAGCCAAATCGAACACGCCACAATTAGCAGGGGGTAGCAGTCTCATGAGTGGCGGCGGTGCCAGCGGCGGTTGCCTCGACGCTACGGAAAAGGCACCAACGCCGATACCCGGCCACGAGACACCAGCACCACCGACACCCTCCTCCACCGTCGCCCTGACGTCACCCTCGATACCAATGGCCGTTAATGCGCTCCAACCGCCACATTCAGCATCGACTGCGACCACAACCATCCTCGACACATTGCACACAAccaacagcagcagcatcatGAACGGCTCGAGCATAGGAATGCTACCGAGTATGGTGCCAACGTCGCTTCCGCCAAAGAGTCCTCAGGAGGAATCCTgtcacaacaacaacaacaatagcCATCATCTAGCCAACAACAACATCGGTGGTCTCAGCGTTCTCGATACCTTGAAGAGCCCTTTTCGTTTCGACGATCGTACGCATCCGTTCAGATTCGGCGATGAATTCGGGGCTGCGGGAATGGCCGGACGACTCGGTGAATCCCTCATACCAAAAGGCGATCCCATGGAAGCGAGACTCCAAGAAATGTTGCGTTACAACATGGACAAATACGCCTCACAAAATCTCGACACTCTTCACATCGCGAGGCGAGTCAGAGAACTTCTATCGATACACAATATCGGACAGAGGCTCTTTGCCAAATACGTACTCGGACTTAGCCAAGGTACGGTCAGCGAACTCCTCAGCAAACCCAAACCCTGGGACAAACTAACGGAGAAAGGACGCGACAGCTACAGAAAGATGCACGGATGGGCTTGTGACGAAAATGCCGTGATGCTACTCAAATCCCTCATACCGAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGTGGTATGCCAGCATTTGGACGTGCTCCACAGGATGGTGGTACGAATGACATGAGCGACGAAAGGTTAGCCCACATATTATCGGAATCTGGACATCTTCAGATGAGCAGAAGCGAGCACGAGACATCGAACGACGCGGATAGCAAGAGTCCGAGTAGACTCGGATGCCCAAGTCCATTTGGCAAAGATCGAATGGACAGTCAGAATAGAAGACtgaagaaatacgaaaacgaCGACATTCCCCAGGAAAAACTTGTACGAATATGTCAGGAAGAATATGCCAAATTGATAGGCAGACGACCTGACGATCTTCGGGGTCTACGTGATTTCACATCGAGCGCGATGTTTCCCCACTTTTTCAGTGGTGCCCAGGGTCTCCAGGGGCAGGAGGATCTGCGAATGGCTCTGGACGCGTACCGTGAGTTACAGAAGATGAACGTAACGACAGGGCAGAATGCTGGTCTCGCGGGTTTGGGAGGTTTGTCAAACATACCTGGACTGTTGGCACTGCAGCAGCAAGCGTTGCAGCAGCAAGCATTGCAGCAGCATCATATGGCAGCGAATGGGGGTGTAGTTCAAGATCTCAGTTTGTCCAAAATGGATCCTCGTAATAAAATGATGAACGGTGTGACGGACGAGGAGAAAGATAAAATGGAGGAGGCTATAAGGCACGCGGGTAGCGCGTTCTCGTTGGTCAGACCTAAGCAAGAGCCGAGCGGTCCGCAGTCGACACCCGGTGGTTCGAGCGCTAGTTCACCACTCGGTAATTCCATTTTACCACCAGCAATGACACCCAACGAAGAATTTTCGGGTGCAGCTGCGGCTAGTCCGCTACAGAGAATGGCATCGATAACGAACAGTCTGATAAGCCAGCCTTCTACACCTACGCATCATGCGACGACGCAACGACCCCTTAAAGCAGTTTTACCCCCCATAACTCAGCAACAATTTGACATGTATAACAACCTCAATACCGAGGACATTGTAAAAAGGGTAAAGGAACAACTCTCGCAGTACTCCATTTCTCAACGTCTTTTCGGTGAATCCGTTCTCGGTCTCTCCCAAGGCTCGGTATCGGATCTTCTCGCCCGACCCAAGCCCTGGCACATGCTCACGCAAAAAGGTCGAGAACCTTTCATCCGGATGAAGATGTTTCTGGAGGATGACAATGCGGTGCACAAATTAGTCGCTAGCCAGTACAAAATTGCTCCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCCTGCGGAACTCCGATGAAGCCTATGCCACCGACCAAATTGGTACAGGAACAATTGCAAAACGCAGCAAAGGCCCAGGCAGCTGCTCAAGCCGCGGCCGCGGCAGCAGCGGCGGCCCAGCACCAACAAGAAAGTCAGCTCCAGCTCGGCCCACCACAACCGAGCTCACAACATCCGTCGCTTTCTCAATCGACAACTCCGTTGATGCTGACTCCACCGGGACCTCATCATCCTCATGCTCAACTGAGCATACAAGAGTTGGCGaaaaagcagcagcagcaggtacagcagcaacagcagcaagtggcgcaacagcaacagcaacagcagcagcagatgGGTCTCCACTCGCCGCATCATCAGATGGCACCATCGCCCTTGCGAAATCTTCATCAGCACATTTCTCCGAGTGTTTACGAGATGGCAGCGTTGACCAACGACCTCGACACTCAAACTATCACGACCAAGATCAAAGAGGCTCTTCTGGCGAACAACATCGGCCAAAAGATCTTCGGCGAAGCTGTACTCGGGCTCTCGCAAGGCTCGGTCAGCGAATTGCTTAGTAAGCCTAAACCGTGGCACATGCTAAGTATAAAAGGTCGCGAGCCTTTCATCCGAATGCAAATGTGGCTTTCGGATCCGCACAACGTCGACAGGCTTCAAGCCctgaaaaacgagagaagagaagcCAACAAAAGACGGCGAAGCAGCGGCCCCGGTCATGACAACAGTTCCGACACCTCGAGCAACGACACCGCCGAATTTTATCACGCCTCATCACCCGGCCCCGGACCACCATCCGCCAAAAAGCAGCGAGTACTTTTCTCCGAAGAACAGAAGGAAGCTCTGAGGTTAGCCTTCGCCCTCGATCCATATCCCAACGTCGCCACCATCGAGTTTCTCGCCGGCGAGCTTGCCCTCTCATCGAGAACAATAACCAACTGGTTTCACAATCACCGCATGAGACTCAAGCAGCAAACTCCTCACGGACAACCGGAGCCACAGTCGCCCCGCGAGCCCGGACAACCCTTCGATCCTGTGCAATTTAGGCTACTCCTCAATCAAAGACTCCTCGAGATTCACAAGGAGCgtttgggcatcggcaacgtgCCCATTCCCTACGGACCATTCTTCAATCCCAACATCGCGACCCTCATGAACAACGCGCTCAAGGAGCAGTGCTCCGGACTCGATCTCTCAATGGGAAGCCTCAAGCGAGAGCCCAATCAGGAATTCGAGGACGAGGACGCCGACGACGCGATGAGCAACCTCGGCAGCGAAGATTCCGACGGGTCAGCGAGTAGTATGAAGCCCAGCGATACGACCGACCTTAGCCAACAGCCCTCCTCCGCACCAACGACCGGAAGATCGAGCAGGAGGAAACCGGCAGCTCCCCAATGGGTAAATCCCGAGTGGCAGGAGCCCCCCAGAACCGGTGACGAAGTCATCATCAACGGCGTCTGCGTCATGCAGACCGACGACTACGGCGTTAAGCGAGAAAACGAGGAGACGGTACGAGTCGAACCTACGCCGGTTCAGGACCGCTACGAGGAAGACGCCGCGAGCGACGTGTCCTCCGTTTCCGCCAACAACGGCCAGGACCGTGAGAGCCCTTTACCGAGTTTAAAATCAGCTCAAAACAGCCCTGCGACCTCGCCCAGACCACCTTCGAACTCGCAACAACAGCAGACCCAACAAGCGACCGACGACGAGATCCCAACGAAGGACATCGTCAAAAACGAGCCCGAGGAAACGTGGGATTATTGA
Protein Sequence
MRIRVKLLILRKLRGKLVQVASYQLISRLVEEVSRLQQSLQRLQETSSQTASRLEEELEARRQHTARLESKLERQRDYDDIKREISILRSVDLSQIPTGEPGKSLEHLLMERSKALQQAETLKPPSTPDALGGLASPLQRTATASPHALGGGVGGAGGVVIGGSAAQPPASLVSCSQQAIPSRSTPTPSSATSTASSLLFPLPLQNVEIFGSFLGEEIVTKWRRSSEIMKQQQQQHHQQQHQHQAQQAQQAQQQHPQQQQSQLQQQALPLQSQNQALSQLQQSQPVVAAAAAVAVHQALQQQQSMHSLHQSTTTNLNHLPSPTDNPSSSASLTNTPAKSNTPQLAGGSSLMSGGGASGGCLDATEKAPTPIPGHETPAPPTPSSTVALTSPSIPMAVNALQPPHSASTATTTILDTLHTTNSSSIMNGSSIGMLPSMVPTSLPPKSPQEESCHNNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGGMPAFGRAPQDGGTNDMSDERLAHILSESGHLQMSRSEHETSNDADSKSPSRLGCPSPFGKDRMDSQNRRLKKYENDDIPQEKLVRICQEEYAKLIGRRPDDLRGLRDFTSSAMFPHFFSGAQGLQGQEDLRMALDAYRELQKMNVTTGQNAGLAGLGGLSNIPGLLALQQQALQQQALQQHHMAANGGVVQDLSLSKMDPRNKMMNGVTDEEKDKMEEAIRHAGSAFSLVRPKQEPSGPQSTPGGSSASSPLGNSILPPAMTPNEEFSGAAAASPLQRMASITNSLISQPSTPTHHATTQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAAAAAAAQHQQESQLQLGPPQPSSQHPSLSQSTTPLMLTPPGPHHPHAQLSIQELAKKQQQQVQQQQQQVAQQQQQQQQQMGLHSPHHQMAPSPLRNLHQHISPSVYEMAALTNDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQMWLSDPHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHASSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIHKERLGIGNVPIPYGPFFNPNIATLMNNALKEQCSGLDLSMGSLKREPNQEFEDEDADDAMSNLGSEDSDGSASSMKPSDTTDLSQQPSSAPTTGRSSRRKPAAPQWVNPEWQEPPRTGDEVIINGVCVMQTDDYGVKRENEETVRVEPTPVQDRYEEDAASDVSSVSANNGQDRESPLPSLKSAQNSPATSPRPPSNSQQQQTQQATDDEIPTKDIVKNEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00265569;
90% Identity
iTF_00439251;
80% Identity
iTF_00265569;