Basic Information

Gene Symbol
Arid4b
Assembly
GCA_037576405.1
Location
JARBWI010000328.1:1402475-1411480[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-28 5e-25 88.1 0.1 1 89 307 394 307 394 0.95

Sequence Information

Coding Sequence
ATGCTGGGAGACGATCCGCCGTATCTGTCCGTCGGTACGGAGGTCAGTGCCAAGTATAAGGGTGCATTCTGCGAAGCAAAAATCAGAAAGGTCGTTCGCTCTGTCAAATGCAGAGTAACGTACAAACAGGGATTGGGAACGGCGACTGTGACGGATGATCAGATAAAAGGAACTTTGAGAGTGAGCGCGTCCGTGGAGGCTAAACATGCGGATAGGAAAGAATTTGTGGAAGCCACCATAACCAAAATACAGGATTGCAGTCAATACACGGTGGTATTTGACGATGGAGATATTACGACACTCAGGAGAACAGCCCTGTGTTTGAAAAGCGGACGACACTTTGCGGAAAGCGAAACTCTGGACCAGTTGCCACTGACTCATCCGGAACATTTTGGAAACCCCGTTATTGGAGGCAGACGCGGCAGACGTTCCAGGCAAGCGCAAGATGATAGTAGCGAAGACGAGGGTAGTCCACCCCGGGGCAATCGGGATTCAGGCTCAGGCATCGGTGGAAAAGAAGGAGTCGAGACTGAGCCGGAAATTGGTCGAGTAGTTTGCGTCGAATTGGGcgataagaagaagaaggattACTGGTTTCCGGGGTTGGTGGTTGCACCGACTGCACAGGACACTGTGAGAATACGTGTACGAGATGATTACCTCGTTCGATCGTTCAAGGATGCTCGCTATTATACCGTGCCGAAAAAAGAAGCGATTGAATTCACGAAAGAATTGGGCAATAAAGTGGAGAATAGCGGACTGAAAGTTGCAGTAGAGAAAGCGTTATTATTTCTGGAAAAGAATGAATTACCACCCCATTGGGACAGAGATTCCCTCTTTGGAAATGCTGTATCGAGCGGGAACAGCGATTCCGACGCGGATCTGGATTCTGACAGTTCGGACGACGAGCCTCGCGAAGAGAAAGACCATTTCGTAGCCCAGCTATACAAGTTCATGGACGATCGTGGAACTCCGATAAACAATTGTCCGATGATCGGAAATGAGGATATCGATCTTTATCGGCTGTTTCGAGCTGTTTACAAGCTCGGTGGTTATAATCGCGTAACCAATCAGAATCAGTGGAAATCGATAACGCGAAGATTAAGTTTTACAATGCAATCCACACCTTCGACACACAATCTCGTTAAACAGgcgtacaaaaaatttttacactCTTTCGAggatttttatagaaaattggGTTGCACGATGGTAAATCATCCGCGAGGTGCTACGAGAAAACCAAGACCGGGGCGTAGTTTGATAAGGGATAAGGATCGGAATACTCCTGTCCCGACGAATCAGGCAACGACTCCAGTCCCGAAAACGAGCTCCGAGCGTGATAAGCATGAGAACGAGGAGGAAACACCGGTCGCTCAGGCATCGCCGGGTGTTCCGTCGGTCTCGTCTCAACAGCAGCAAGCTGCTTCTCAACAATCAGAAACTCGGACGCCACCGCCAGTTTCTTCAAGCGTCGCCGCATCCCAAAAGAAATCTGTTGttgaggaggaaaaaaaagagaaacgcgTCGAACCTGTTGCAGCTCCAGCGCCTCCAGCCTCCAAGGAAATAGTTAAAGAAGAGGAACCAAGCAGAACCACcacgaagaagaaagaaataatcgaAGAGCCAATAAGTGGTCAAGAGAGCGACGTTAATGTTGAGGCCGAGGGCGGTGAATCTTCGAGCAGTGAAAAGTGCTCAAAATCGCCAGCGCGTTCCACTCCCGTACCTACTGTTGCCGCGACCGTGACTGCTGTTGTCGCTGGTGCTGgggctgctgctactgcttcttcttcttctgctgCTGCGCCCGTAGCAGGTAGTGCTcgtacgaaaaattcaacgaaaacgaaagaagatacgagtacgaaaaagaaaatacatgaaaagcgGAAAGCGCAAGATAACGCGTCGTCGGGAGTAACGACGACTTCGAACGCACCGAATTCTGGACTCGGCACAAGCGCGAATACAACAACTGCGACGAGCGCACCAGCGAGCACAAGCGGCCCAACGTCCAAGAGGCTAGAGGGCTCATCGAAACGAGATGATAAATCGAAAGAGGAAGAATCAACGAAAACGCGTTCCAAGTCAAAGGACGACGCGAGCAAAGCAAAAGCCAGCGTCGAAGCGGCCCGTGAAACGCGCACTCCGTCCCGCGAGTCAGAAAAAACTCGGGCTAATCCAACGAAACAACGTCGTATGACCGACGAGGAATTGAAGAAGCAACAACGTGgcagaaaaaaacgtgaaaatgagACTGAAAAGTCACGCTCCGAGAAGGACGATAGCAGCGGAGTCGAGAGTAACGCCGCTACAGCACCGACTTACAAAGGTCCCATCGAACTCGGCGACAGACTCAAAGTTTATTACGGACCGACTCACGAGTCAAAAGTAACGTACGAGGCTAAAGTAATCGATATTGAAAAGGTCGGAAGCTCCGAGGCTGCTTATCTCGTACATTATACCGGCTGGAACACGCGATACGACGAATGGATAAAACCTACGAGAATAGCTCAAAACTTTACGCAGTCACAGAGTCGCATAAAACGTACGAAAGCAACGCCTCGCCCTCAGACTCCGAGCAGCGCCGCGGCCGTTGCCGGTAACAAAACTTCAAAAGCTTCTTCCACCGGCAACAGCGCACCTCCTGGTTTGCAAAGTCGTCGTCGGGCTCAAAACAATTCAGCAGCAGGAACAGCGGCTAATTGGTCGGTTACGAATACAATATCATCGAATTTGTCTGCCGGTACGAGTTCCTCGAACGGATCGTCCTCATCGTCGACGACGCTCACCAAAGACAAGGAATCCGCTAACTTTCAACCAGCGAGATCGACAACCCCACTTTCCGTAGCGAGTTCGAGCTCAAGAACCAAGAGTCCAGCAACTCCAGCGACTTCCGGACGTCCGGTAAGAAACACCAGGAACACCGATCATGGCGTCGAGCTACGAAGACAAACTCGTCGGATGTCCAGCCGCATGGATATGGTACATTATTGTACGGAGAGCGACGATAGCGAGACTTACGAAGTAGCCGAAGAGCCACGAAGACGAAGGGTTTATCGGCGTAGAGTCGATGAGAGAATCAAGAACGAGGAAAACAGCGAAAACGAGGAAGATGAAAAGGACGCTGTTCAAGAGCCAAGAAGAACGAGAAGATTACGGAGAACCGTTACGAAAGTCAAAGATGCAAAAATAACTTGTAACGATGGGGGAGCCGGAGCGGATGGCgacgaagaggaagaggaaggcgaggaagaagaggaggatgaagaagaagctgacgaggaagaagaagaggagggagaggaggaggaggaggaggaagaggaggaagaggatgCCGACGAGGAAGACGATGCTGACGAAGCTGAAGATGTGCCCGACGAGGAAGTTACCGCTTCTACGATTCCAGCCAAATCAACGACCGCAACATCATCCATCGCAATTAATAATTCCGTTTCTTCGACCAACGACACCGAGATATCAAGCACCGCGACTCAGGCAGCTTACGAACGTTCCAACGAGCGTCACGATGAACAACCGAAAGGTCGTGATTTTGATCTCAATCAGATTAGATCCGAACTCAAAGGTTTCGACAAAGCGGTTAAATTGGAACTCGTTAAGTTCGAAACCGACGAAGCTTCCGGAGAACCAGCTGGAGAAACCGGCGTTAAATCCGAATTTCCCTCGGATTTGGAGAAAAAACCTccgaaagaagagaaaaaaattgacggtTCAAAGATAATCGTTGATTATCCGGACACAAAACCTATTTTGGATAACACCGGGGCTGTCATAAccaccataaaaaaatcagcatcgcCACCACCGCTGATCTCGCAGAGTCAAACAGCTCCTAGTTCGATCGTTCCACCAACGAGCGTTGTAGCGGCGACAACaacaccaccaccaccaccaccggtACCGCCTCAGCCACCTACCGAAGACGTTTACGAGTTCAAAGAACCCGAACCTTTCGAGTTCGAAGTTCGTAACAAACGCGATTCTTCCGGTGAcaaggaaaaaacgaaaaaacgagttttcgacGAGGAGCCCAAGAGTccaaagaaaaagcaaaaaacatCGATGAGCCCTTCGCCCAAAGAGCCTAAGAGCGAAGCCGACGGTACGAATGTCGATCAGAAGAGAAAAGTGCGAAGGAATGCGGCtaagaaaattgacgaaactcTCGATTCAAGTACGAcgacagcagcagcagcagcagcaacagcagcagcggcAGCAACAATGTCGAGtatgaacaaaatttcatcttcCTCAACTGGCACAAAagatattttagaaaaatcgaaCTTAATCAATTCGATGAACCAACCAAAACCTCTACCAACTTTACCCCCGCCCTTACCCCCGCCTCCGCCGCCCCCACCGCCACCACCACCCCCGCCAGGCTCCGAggagacgaaaaaatcgagcaCGAATATCGATCTATTGTTTACAGATTTACCGAAAACCGAGGATGACTCGGTCGATCACGATGATCCCGAGGATCGTCTTGTTATTTCGGAAACTGAAATTCCAGAAGCTGAACAAGTTACTCTTTTCGCTTATCAACAAGAAACAGTAGCCGCGAACAACAGCGAGGTCAAGCCTGAGAGAATGGAATTCAGTGCCGGACCGATCGAGACTCCGAAACCAATGGTCCCTTCGATCATCTCCACGAGTGTTATTTCGGTAACGACTTGCAGCACGAGCGCGAGTATCTCATCGGTAGGTCCGATGGATCGTAAAACGCTCGACATAACGAGAACCGGGAGCGGTGTTTCATCGAGTACAAGCACAACTCTGCCAACTCCGGTTCCGATAAGCGCAAGATTACCGGCAACATCgacgatcgaagaaaaattgtcagcTGCCTTCCGTCAAGTAAGATCGAAAGAGTCTAAACGGGAGGACGACAACTCCGAGACAGGAAAGAAAAGTGGGAAAGAGGCGAGCCACAAAAAATCAGAAAGCATGGCAGCCAAGAGAAAAGCCAGTGAAGAATTGGCAAAGATCAAGTACGAGACGGAGAGTGCGAGAAAGCGCGAGATTGCCGTGGAAGAAACGACGAAACAAGAGGAGGAACGTTGCCGAGAAGCGATGCGAGCGGTGATTAAACAAAAGGAGGAAGAGCTCGAGCAAttgaaaatgcgaaaagaggcggaattgaagaaaatggcGGAGGCTAAGGCATCGGCGGAAAATCGTAAAGTCGTGGATAAACGTAACGACGACGATTGGAGCAAACGAAAAAGTCACGAGATGCAAATTGAATTTGGAGGAAGTTCGAGTGAAACGTCAACGACGAGTAATAATCGAGAAGAGGAGCAACAGCATAAAGAGCAGAGCTTAGCGGATCGTCAAAGGgacaagagaaagaaaataattagcCAGGAATTCGTTGACTCTACGGACAGCAGCGATTCGGAGCAAAAATTAGTGATCGACAGTGTGGCCGAGGTACGCGAGGATAAACCAGCCTCCTCAAATTTCGACACAAAACTCAAAGCCGAGCTGGAACTTTTTCAACAGCAAAGTTCCCAACAAGAAAGCATAGACATAAATATGGGACGATCGAGCAATCTTCAAAATCCGTGTCTTCGGGCGATTCAACAACAGGTTCAGCCGTGCTTAATAACGACAAAATTAACACCAAAAACTGAGGAGGAAGGTGAAAATATGAGTTCGCTTTTGTGCGAAGAAGAAATACCGGGTTCTCCGGCACCAGGGCCTGAGATCATTGATCAGGATGGCAGTGGCGAACCTCGGACAATTCCAAAGGACGAGcgtggggagaaaaaaatggttcttcTGGAAATGCCTTTCGCTAGCGCACCGACCTCCGGCTCGCAAAGTAGTACAACCAGCGCCGTTAACGTCGGCCCTAGTCTCGGTGTTCCTATATCAAATGCCTGCAACGTTGCAGTCTCCGTAGCCCTTCAAAtccaacaacagcaacaagtCGTTAGCGCGGTGGGATCCCGACATCAACAACCTCACCAGATTCAGCAACAACCGCAACAACCGttgcaacaacaacaacaacaacaacaacaacagcagcaacaaatGGCCGGACCTGCGATAGCTCAGAGACGAGAGAGCAACGAAGCAGCTCCAGTTATGGACAATACGCCACCGACGACTCCGGATTCCACAATCTCCAATATTTCCGGATCACCaagggaggaagaaagaatCGGTGTTTCGTCTCCATTGTCCGAGGAAAATGTTAAATCTCATCGAGACAGCTCCGAAGCCGATGACAGTGGGGCTGGCAAAGCTCCTTCCGGTTACAGCGAGGACGACACCCTCGCTAATGTCGAAGTCAACAATACCACCGAAAGAACGTCGAAAACCTCCGTCAAAAGATCGATCGAAGATCCTCAATCGCCGAAAAAACGCAAAAGAAATCGCAAACATTCCGAACAATGCGGCAGCAATGTTCCCGTTGTTGTGAAAAAACCACTCGGAAGACCACCCGCAAGCACGAGACAAACGAGACACGGAACCGCACCTACCGGAAGTGATAGCGACGACACTAGCGAATCTTCCAATCCGTACGCCATTGGTACTACGACCGGTGTTGGCTCAACTCCTAGTAGTGCTGCCATTGCTGAAAACAATGCGATTGCAACTGCTATCACGGAATTGAGCAATTCTTCGAGGTCACCGAAACCCATGAAGTACAATTTCTTCGTTGAACTCGatccCGAACTCGACGGTAGCCAAAGGATAGCGGTACTCCAACAAAAACTCACAGAACTGAGAAAAACTTATAACGCAGTGAAAGTTGAACTTGCGGGTATCGAGAGAcggcgaaaaaaattgagaagacGAGAGCGCGAGGCTCTGAAGGCTGCAAAAGCGGAGATGCAGCAAGCGTGCTCTTGA
Protein Sequence
MLGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVTDDQIKGTLRVSASVEAKHADRKEFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDDSSEDEGSPPRGNRDSGSGIGGKEGVETEPEIGRVVCVELGDKKKKDYWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEAIEFTKELGNKVENSGLKVAVEKALLFLEKNELPPHWDRDSLFGNAVSSGNSDSDADLDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGNEDIDLYRLFRAVYKLGGYNRVTNQNQWKSITRRLSFTMQSTPSTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGATRKPRPGRSLIRDKDRNTPVPTNQATTPVPKTSSERDKHENEEETPVAQASPGVPSVSSQQQQAASQQSETRTPPPVSSSVAASQKKSVVEEEKKEKRVEPVAAPAPPASKEIVKEEEPSRTTTKKKEIIEEPISGQESDVNVEAEGGESSSSEKCSKSPARSTPVPTVAATVTAVVAGAGAAATASSSSAAAPVAGSARTKNSTKTKEDTSTKKKIHEKRKAQDNASSGVTTTSNAPNSGLGTSANTTTATSAPASTSGPTSKRLEGSSKRDDKSKEEESTKTRSKSKDDASKAKASVEAARETRTPSRESEKTRANPTKQRRMTDEELKKQQRGRKKRENETEKSRSEKDDSSGVESNAATAPTYKGPIELGDRLKVYYGPTHESKVTYEAKVIDIEKVGSSEAAYLVHYTGWNTRYDEWIKPTRIAQNFTQSQSRIKRTKATPRPQTPSSAAAVAGNKTSKASSTGNSAPPGLQSRRRAQNNSAAGTAANWSVTNTISSNLSAGTSSSNGSSSSSTTLTKDKESANFQPARSTTPLSVASSSSRTKSPATPATSGRPVRNTRNTDHGVELRRQTRRMSSRMDMVHYCTESDDSETYEVAEEPRRRRVYRRRVDERIKNEENSENEEDEKDAVQEPRRTRRLRRTVTKVKDAKITCNDGGAGADGDEEEEEGEEEEEDEEEADEEEEEEGEEEEEEEEEEEDADEEDDADEAEDVPDEEVTASTIPAKSTTATSSIAINNSVSSTNDTEISSTATQAAYERSNERHDEQPKGRDFDLNQIRSELKGFDKAVKLELVKFETDEASGEPAGETGVKSEFPSDLEKKPPKEEKKIDGSKIIVDYPDTKPILDNTGAVITTIKKSASPPPLISQSQTAPSSIVPPTSVVAATTTPPPPPPVPPQPPTEDVYEFKEPEPFEFEVRNKRDSSGDKEKTKKRVFDEEPKSPKKKQKTSMSPSPKEPKSEADGTNVDQKRKVRRNAAKKIDETLDSSTTTAAAAAATAAAAATMSSMNKISSSSTGTKDILEKSNLINSMNQPKPLPTLPPPLPPPPPPPPPPPPPPGSEETKKSSTNIDLLFTDLPKTEDDSVDHDDPEDRLVISETEIPEAEQVTLFAYQQETVAANNSEVKPERMEFSAGPIETPKPMVPSIISTSVISVTTCSTSASISSVGPMDRKTLDITRTGSGVSSSTSTTLPTPVPISARLPATSTIEEKLSAAFRQVRSKESKREDDNSETGKKSGKEASHKKSESMAAKRKASEELAKIKYETESARKREIAVEETTKQEEERCREAMRAVIKQKEEELEQLKMRKEAELKKMAEAKASAENRKVVDKRNDDDWSKRKSHEMQIEFGGSSSETSTTSNNREEEQQHKEQSLADRQRDKRKKIISQEFVDSTDSSDSEQKLVIDSVAEVREDKPASSNFDTKLKAELELFQQQSSQQESIDINMGRSSNLQNPCLRAIQQQVQPCLITTKLTPKTEEEGENMSSLLCEEEIPGSPAPGPEIIDQDGSGEPRTIPKDERGEKKMVLLEMPFASAPTSGSQSSTTSAVNVGPSLGVPISNACNVAVSVALQIQQQQQVVSAVGSRHQQPHQIQQQPQQPLQQQQQQQQQQQQQMAGPAIAQRRESNEAAPVMDNTPPTTPDSTISNISGSPREEERIGVSSPLSEENVKSHRDSSEADDSGAGKAPSGYSEDDTLANVEVNNTTERTSKTSVKRSIEDPQSPKKRKRNRKHSEQCGSNVPVVVKKPLGRPPASTRQTRHGTAPTGSDSDDTSESSNPYAIGTTTGVGSTPSSAAIAENNAIATAITELSNSSRSPKPMKYNFFVELDPELDGSQRIAVLQQKLTELRKTYNAVKVELAGIERRRKKLRRREREALKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00439243;
90% Identity
iTF_00266233;
80% Identity
-