Basic Information

Insect: Camponotus floridanus
Gene Symbol: stc
Assembly: GCA_003227725.1
Location: NW:2204268-2208751[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 1.2e+04 -4.6 4.3 6 11 448 453 447 454 0.86

2 15 1.5 9.1e+03 -3.7 1.1 15 19 475 479 474 479 0.82

3 15 0.13 7.9e+02 -0.3 0.1 4 10 508 514 507 515 0.94

4 15 3.1e-06 0.018 14.5 12.6 3 18 524 539 523 540 0.92

5 15 2.9e-08 0.00017 20.9 16.1 1 18 576 593 576 594 0.98

6 15 2.2e-05 0.13 11.8 10.3 1 19 632 650 632 650 0.92

7 15 0.99 5.9e+03 -3.1 0.7 5 10 679 684 679 684 0.94

8 15 0.0044 26 4.4 9.7 4 18 697 711 690 712 0.86

9 15 2 1.2e+04 -4.6 1.6 5 10 741 746 741 746 0.90

10 15 0.0042 25 4.4 9.3 1 11 752 762 752 774 0.88

11 15 5e-09 3e-05 23.4 10.4 1 19 779 797 779 797 0.98

12 15 1.3 8e+03 -3.5 0.5 6 10 826 830 825 830 0.86

13 15 2 1.2e+04 -6.9 8.7 10 18 844 853 833 854 0.78

14 15 4.6e-07 0.0028 17.1 10.9 1 16 890 905 890 916 0.87

15 15 3.1e-06 0.018 14.5 12.4 1 19 922 941 922 941 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	1.2e+04	-4.6	4.3	6	11	448	453	447	454	0.86
2	15	1.5	9.1e+03	-3.7	1.1	15	19	475	479	474	479	0.82
3	15	0.13	7.9e+02	-0.3	0.1	4	10	508	514	507	515	0.94
4	15	3.1e-06	0.018	14.5	12.6	3	18	524	539	523	540	0.92
5	15	2.9e-08	0.00017	20.9	16.1	1	18	576	593	576	594	0.98
6	15	2.2e-05	0.13	11.8	10.3	1	19	632	650	632	650	0.92
7	15	0.99	5.9e+03	-3.1	0.7	5	10	679	684	679	684	0.94
8	15	0.0044	26	4.4	9.7	4	18	697	711	690	712	0.86
9	15	2	1.2e+04	-4.6	1.6	5	10	741	746	741	746	0.90
10	15	0.0042	25	4.4	9.3	1	11	752	762	752	774	0.88
11	15	5e-09	3e-05	23.4	10.4	1	19	779	797	779	797	0.98
12	15	1.3	8e+03	-3.5	0.5	6	10	826	830	825	830	0.86
13	15	2	1.2e+04	-6.9	8.7	10	18	844	853	833	854	0.78
14	15	4.6e-07	0.0028	17.1	10.9	1	16	890	905	890	916	0.87
15	15	3.1e-06	0.018	14.5	12.4	1	19	922	941	922	941	0.97

Sequence Information

Coding Sequence: ATGGCCACTTGGGACGGCTCGTTCCCAGACGATCCGAATTATTCCGCCCGAGACGCCTGTGCCACGCGAGACAACTGGATGTACCTCGACGACAACTCGGCATATCTGCAAGACGTCTCCGCGAGGTGCTACTATCCGGGAGCAGGTGGTCGACCAGTGTACGAGCAGGACGGATCCGCCGACCCTTTCTATCAGCATCCGTCGAATATGGTGCCTTTAGAAAATACCTATCAGGAACACATACTGCCAAGCACGTCGTCCGTCCCAGGCGGCTCGCAAACGTCGAATAATTCGCATAAAGCGCCCTTCTTCCGTGACAATCACAAGCCGAGATCCAAGGGCAACAGAACGATCAGCTTGACGACATTCACTACGTCAAAAGGCGATACCATCCAGTCCAGCATAGTGCAAAACTCAAATTTACACGCTACAGCCAACGAATTCGTGCCAAACAGTATTAGATTGAATAAGAAGGACAGATTTAGTAAAAAGGACGATTATAATAACATGGCTGGAGGTAGTTTTGATGCGCAGGATTTCAGGCCAAGATCATTTCACAAGTATACATCAGATAATAGATACAAGGGTGAAAGACGCTATGATAATAGAAGGGATGTAAATTATTGGCAAAAGAATCCACAAGATGCACAAATACCATCAAGATCTAAATACAGGGATACTCAGAGAAATGGgagaaattacaataaatttcagaatggaaaatattataatagaaggTATCAATCAGATGCATTATATGTTGAACAATATGCTGATGGAAAAGCTCGTACACCTACAACTGAACTCAGTGATTCGTTTGATAGCAAGGAAAATAAACCCTCTGCTAAAGGATTTCAGGAGAATGACTCGTCTTCAGATGTTGGTAAAAACAGAGAGGGTACATGCAAGGATAAtgacacagagaaaaatactTCCTTGCAAATTCTTGAGACACAACGAAATAAATCTAAGCAATTCACTGACCACACTAATGCatctaattatcataaatataattataaatataaacattattataaatacaattctgATGATGTACAGTCTGAatctgataataaatataaaactgcaGCTACAaagtatatgcataaaaaaaacaatgaggTGACAGCAAATCACAAAGAGAGGAACTTGGAAAATTGGAGAGATAAGACAGAAGATAACGAGATAGCACGAGtacaaggaaaaaatataaagaaaaaacataaaattgATGATGATGCTAGTCAAAGGGAAAGATTGACAGAGCAATTGAACAAGGGAATATTAGAATGTTTAGTTTGTTATGAGCATATCAAGCAAAGTGACTATGTTTGGTCCTGTAGTAACTGTTGTCatgtattacatttaaaatgtattaaaaaatgggCTAAATCGTCTCAGAGCGaGAACAGTTGGAAGTGCCCAGCCTGCCGGGATATTAGTTTTCTCGTACCAGAGgattatttctgtttttgtggaaagagaaagatgccGGAATGGAATCGTAGGGACGTGGCACACTCGTGTGGCGAGATCTGTGGTCGAAATCTATCCAAGAACAATTGTACACACAAATGTAATCTGCTCTGCCATCCCGGCTCTTGTCCACAATGCGTGACGATGGTGACCAAGTATTGTGGCTGCGGAAAAATGTCGAAAATACTGCTGTGCAGCGGTCAGCAATTATTGCAGTGCGATTCGATATGTGAAAAGAACTTGTCATGCGGCAAACATACCTGTCGGAGAAAGTGTCATCAGGGAGAATGCGGGCCTTGCGACAAAACCGTGCaacaaaCCTGTTTTTGTGGTAAAAATACTCAGGAGGTACCTTGCCGAGCTAATGTCACAGATACATATTcctgtaataatatttgtaacaaacCATTGGATTGTGAGAAACATTATTGCCAAAAAATCTGCCATTCGGAAGCATGCGAACCTTGCTCCTTGACGCCCGAGAGAGTCACGACGTGCTGTTGTGGTCAGACACCATTAacagaaaagagagaaagttgCTTGGATCCTGTGCCTACCTGTGACAAAATCTGTTCTAAACGTTTGAAGTGCGGCCAGCCTAGTAATCCACACATCTGCAAGGCACTATGTCACGTCGATGAATGTCCGGACTGCGATTTGAACACCAATGTCAAGTGTCGATGCGGTAACATGGACCGCGAGATCGCTTGCAAGGACCTGACGAGTAAAGCCGACGATGCGCGCTGCGAAAAGCGTTGCAAGAAGAAACGATCTTGCGGCAAACATTACTGCAATCAGCTATGTTGCATCGATATCGAGCACATCTGTCCATTGCCATGTTCGAAAACATTGAGCTGCGGTCGGCACAAGTGTCAAGAGAGATGTCACATGGGGAGATGTTCGTCTTGTTGGCAGAGTAGTTTCGAAGAGCTGTACTGCGAATGCGATGCTGAGGTGATCTATCCACCAGTACCGTGCGGGACGAGAAGGCCCGCTTGCAATCGACCATGTTCCCGCGAGCATTCCTGCGATCACGAGGTGCTGCACAATTGTCACAGCGAGCCCACGTGTCCGCCTTGTGGCGTTTTGACTCAGAGATGGTGCCACGGTAAACACGAACTTAGGAAAGCTGTACCGTGCCACGTAAAGGAGATCTCGTGCGGTTTATCGTGTAACAAGCCACTGACATGCGGACGGCATAAGTGCATCACAATGTGTCACGCCGGGCCGTGTGAAAGACCCGAACAACAATGTATACAACCTTGTAACACAACGAGGGAACTGTGCGGACATATCTGTGCTGCTCCATGCCACGAAGGCAAGTGTCCAGATATGCCTTGCAAAGAGATGGTTAAGGTTACATGTCAGTGTGGACACAGAACTATGAGTCGTGTTTGCGCGGATAATGCACGAGAATATCAACGAATAGCGAGCAACATACTAGCCAGTAAAATGGCCGATATGCAACTCGGTCATTCCGTCGATTTAGAAGAAGTATTCGGGCAAGGCGCAAAGAAACAGAATCAGCTAAAGACCTTGGAATGCAATGATGAGTGTAAAACAATAGAGAGAAACAGGAGACTTGCACTGGGATTACAAATCGTCAATCCTGATTTGAGCGGCAAGTTAATGCCCAGATATACAGATTACATGAAACAATGGGTCAAGAAAGATCCGCATTTTTGCCAAATGGTTCATGACAAATTGACGGAATTGGTCCAAAAAGCGAAAACATCTAAGCAGAAATCTCGAAGTTATTCATTCGATGTTATGAACAGAGAAAAGCGCCATTTCGTGCATGAGTCATGTCAACACTTTGGTTGCGAGAGTCAAGCATATGACGAGGAACCGAAAAGAAATGTCGTTGCCACTGCTGTGAAAGATAAGTGTTGGCTACCAAGCTATAGTTTATTAGAAGTGGTGCAGCGGGAGAAAGGACAAAGAAAAGTTCCAGGACCGGTACTTAACGCTTCTAAGGGAAATAATTCTACAAAGACTGTTCTTTCGTTACCCGTAAAACAGAATCAGAAATCATTACCATCACCATCAACTGCAAAAACATCTGATAAAGAGATAGATTACTTCGACTATCAAGGATGA
Protein Sequence: MATWDGSFPDDPNYSARDACATRDNWMYLDDNSAYLQDVSARCYYPGAGGRPVYEQDGSADPFYQHPSNMVPLENTYQEHILPSTSSVPGGSQTSNNSHKAPFFRDNHKPRSKGNRTISLTTFTTSKGDTIQSSIVQNSNLHATANEFVPNSIRLNKKDRFSKKDDYNNMAGGSFDAQDFRPRSFHKYTSDNRYKGERRYDNRRDVNYWQKNPQDAQIPSRSKYRDTQRNGRNYNKFQNGKYYNRRYQSDALYVEQYADGKARTPTTELSDSFDSKENKPSAKGFQENDSSSDVGKNREGTCKDNDTEKNTSLQILETQRNKSKQFTDHTNASNYHKYNYKYKHYYKYNSDDVQSESDNKYKTAATKYMHKKNNEVTANHKERNLENWRDKTEDNEIARVQGKNIKKKHKIDDDASQRERLTEQLNKGILECLVCYEHIKQSDYVWSCSNCCHVLHLKCIKKWAKSSQSENSWKCPACRDISFLVPEDYFCFCGKRKMPEWNRRDVAHSCGEICGRNLSKNNCTHKCNLLCHPGSCPQCVTMVTKYCGCGKMSKILLCSGQQLLQCDSICEKNLSCGKHTCRRKCHQGECGPCDKTVQQTCFCGKNTQEVPCRANVTDTYSCNNICNKPLDCEKHYCQKICHSEACEPCSLTPERVTTCCCGQTPLTEKRESCLDPVPTCDKICSKRLKCGQPSNPHICKALCHVDECPDCDLNTNVKCRCGNMDREIACKDLTSKADDARCEKRCKKKRSCGKHYCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHMGRCSSCWQSSFEELYCECDAEVIYPPVPCGTRRPACNRPCSREHSCDHEVLHNCHSEPTCPPCGVLTQRWCHGKHELRKAVPCHVKEISCGLSCNKPLTCGRHKCITMCHAGPCERPEQQCIQPCNTTRELCGHICAAPCHEGKCPDMPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKTIERNRRLALGLQIVNPDLSGKLMPRYTDYMKQWVKKDPHFCQMVHDKLTELVQKAKTSKQKSRSYSFDVMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEVVQREKGQRKVPGPVLNASKGNNSTKTVLSLPVKQNQKSLPSPSTAKTSDKEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00869301;
90% Identity: iTF_00264699;
80% Identity: -