Cflo003354.1
Basic Information
- Insect
- Camponotus floridanus
- Gene Symbol
- ttk
- Assembly
- GCA_003227725.1
- Location
- NW:8817167-8829831[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-13 3.5e-10 38.9 0.0 1 45 365 409 365 409 0.96 2 2 3.5 5.2e+03 -3.3 0.1 23 32 466 475 466 475 0.89
Sequence Information
- Coding Sequence
- ATGACGGACGACATGACCTCGGCTCAAAAATATTGTCTTCGCTGGAATAATCATCGGTCGAACCTGCTGTCCGTCTTCGAGGACCTTCTGCAAACCGAGGCGTTCACCGATGTATCCCTCGTCGCGGATAACGGTCAGATCGTCAAGTGCCACAAGATCGTCCTAGCGGCATGCTCGTCCTACTTCCAGTCTCTGTTCATCGCTCTGCCGTGCCTGCACCCCACGATCATCCTCAAGGACGTTAAATATTCGGAGCTAAGGGCGATATTGGAGTACATATACCGTGGCGAGGTGAATGTGCAGCACGATCAGCTGAAGAACTTGCTCAAGATCGCGCAGATGCTGCAGATCAAGGGTCTGGTGGAGTACGATGACAACGTTGGCGGACGGTTCTCGCAAAACGATTTTCATCGGCATGAAGATATGATGGAGACGTCCTTGTCACCACCGCCGGCCATCAGCACCAGTACCAATGCCACTAATATGGCGGTGCACAGCAGCGGTCATATGTCACCGCCGCACTCCACCGATGGTATCTACGGTGGTCTCTACAACAAGGGAAGGACCTCGGGAACGACCTCGGGAACGACCTCGGACTTCAATCAAATGCAGAATCAATTTCCATATTGGTCGCTGCCCTCCTTATTGCATCACCAGTTATCGCCGCGCTCCTCTTCTATTCTTCCCTCGGCTCTCAGCGGAAATGGTGGTTCTTCCTCCTACGACGGCTTCACCGAATCGCTCAAACGCAAGAAGACGTCGCTCTTGAACCCGCCGAATCACGACACACCGATACTGCGCACCGTCCTCGGTCAGAGTCACGCTGACAGTTCCTTGGGTACATCGATGTTGCAATCTGACAATCACGAGCCGATGCATCTTCGCTCCAGCAGCAACGGCTCTGCAAACGACGACAATCATCGCGGCAACATCGATTCGGCTCATAACGAGACGGCTCACTCCTCTCACACGGAGCCTTCCGTGGATGAGGATGAGAAACGGCCATCGTCGCAATCGCACACCACAAATATCAAGTCAGGTAACGGGACTCATGCACAATCAAAACCCGAATGGAAACGATACAAGCAATACACCCGAGATGATATCCAGGGAGCGATCGAGGCGGTAAAGAGAGGCATGAGCGCCGTGCAAGCGGCACGCATGTACAACGTACCATCCCGTACGCTTTACGACAAGGTGAAGAAGCTCGGCATCCCGACATCGCGACCACTCAAGCGTTCAACAAGCAACGGCGATAGCGCGGCTTCTTTCCCATTCGATGTCGGTGCTAATGTGAACGGCAGGATTTACAGTGGCAGCATGTTATCCAAAAACGAGAACGAAAATAGCGGCAATCTCAATAACTTTGAGCACTTGTCTATTAGTCCATCGAGCGCAAACACGTACGATGTCGCTTATAAAACGTCAAAGGATACGTCACAGGATCACGATTCGATGTCTGATTCGGCACGCTACAGCACAAGTCCGGTTATACGCTGCCCTAAACAAAAGCAACAACAGAACGTCGAAGATGAAGTGGAAGATCTATCGCTTTGCATTTACTACCTGCTATGCATAGCAGCAGTAAACTTGACGTTCACCTCCGATTTGGAGATTACCACGACAAAAAGTTGGGACTGCCCGCTAGAATGCATTTGCCTCTCTCGAAAACAGGTACTCTGCAATACAGGTGGCCTCGAGGACATCCCGACGCAGCAGCTGCCGGAGACCGTGGAGGAGCTGTCGTTGACGAAGAACGACTTCCCGGTGATAAAGGGCGACACGTTCGCCGGTCTCCGGTCGCTGCGTAAGCTCATCCTGGACGGCAACAATATCTCGAGTATACGGCCGTTCGCGTTTCGCGGTCTGAATCGGCTACGCGAGCTGTCGATCCAGCATACCCCCTTACCTTGCATCGAGAGGTTTTCGTTCGCCGCCCTGCAGAATGTCTCCGTCTTGCTGCTGGCCAACAATAAGATCCGCTTCGTCGAGGGCTACTCGTTTGCCGGCGCGTCCAATGTGAATCTGATCCTGCTGAGCAACAATCCGCTGCACACCATCCGCAGCCACGCGTTTGCCGGCCTCACCAATGTCAACAATCTCATCTTCCCGTCTGGCATCCGCGTAATCGAAAAGAACGCCTTCGACGGCCTCCAGTATGTCGGTCAGCTCAAACTCAGTTATATGGATCTGGCTGGGTTGCAGCCCAATACATTTTACGGTCTGTCGTACGTCCACTCGATTTATATTCAAGAGAGCGACCTGGGCACCGTGCAGAAGGATGCGTTCGCCGGTCTTACACACGTGAACTACCTCAACATACTCAACAACAAGGTGGATCTGATTCAACGCCTGCATCTGCGCTACGAAAACTACATCGAGATGCTGCGCTTCCACGGTAATCACGTGCTGGAGGCGCCGCGTCACGCCAGGGACGTCGTCCTCGAGGTGACCACGATCAGCGCGATCGACAATCACTTCCCGTGCGACTGCCAGGCGCACAACGTCTTGGAGAGCGACTTCGCCCGCGGCGACAGCGTTGAATTTCAACGCCGCAACTATTGCATCTCGCCGTTCGAGTACAACGGCAAGCCCATGAACGTCGTCGACTTTGAGCTCGTCGCTCGATGCCACGACAATGTGATTCAGGACAACCTGGGCTCGGGCGAGATCGGGCTATCATCCCTATGTATATCAGGATTTACGTTGCTGATCGCCTTTTTGTTCTCGATGAATCTCTTGCGATGA
- Protein Sequence
- MTDDMTSAQKYCLRWNNHRSNLLSVFEDLLQTEAFTDVSLVADNGQIVKCHKIVLAACSSYFQSLFIALPCLHPTIILKDVKYSELRAILEYIYRGEVNVQHDQLKNLLKIAQMLQIKGLVEYDDNVGGRFSQNDFHRHEDMMETSLSPPPAISTSTNATNMAVHSSGHMSPPHSTDGIYGGLYNKGRTSGTTSGTTSDFNQMQNQFPYWSLPSLLHHQLSPRSSSILPSALSGNGGSSSYDGFTESLKRKKTSLLNPPNHDTPILRTVLGQSHADSSLGTSMLQSDNHEPMHLRSSSNGSANDDNHRGNIDSAHNETAHSSHTEPSVDEDEKRPSSQSHTTNIKSGNGTHAQSKPEWKRYKQYTRDDIQGAIEAVKRGMSAVQAARMYNVPSRTLYDKVKKLGIPTSRPLKRSTSNGDSAASFPFDVGANVNGRIYSGSMLSKNENENSGNLNNFEHLSISPSSANTYDVAYKTSKDTSQDHDSMSDSARYSTSPVIRCPKQKQQQNVEDEVEDLSLCIYYLLCIAAVNLTFTSDLEITTTKSWDCPLECICLSRKQVLCNTGGLEDIPTQQLPETVEELSLTKNDFPVIKGDTFAGLRSLRKLILDGNNISSIRPFAFRGLNRLRELSIQHTPLPCIERFSFAALQNVSVLLLANNKIRFVEGYSFAGASNVNLILLSNNPLHTIRSHAFAGLTNVNNLIFPSGIRVIEKNAFDGLQYVGQLKLSYMDLAGLQPNTFYGLSYVHSIYIQESDLGTVQKDAFAGLTHVNYLNILNNKVDLIQRLHLRYENYIEMLRFHGNHVLEAPRHARDVVLEVTTISAIDNHFPCDCQAHNVLESDFARGDSVEFQRRNYCISPFEYNGKPMNVVDFELVARCHDNVIQDNLGSGEIGLSSLCISGFTLLIAFLFSMNLLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00265119;
- 90% Identity
- iTF_00265119;
- 80% Identity
- iTF_00265119;