Basic Information

Gene Symbol
Hivep1
Assembly
GCA_030586385.1
Location
JAPIVC010000247.1:3996-17901[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.00047 0.098 14.6 2.4 1 23 130 152 130 152 0.97
2 9 0.017 3.6 9.7 4.0 1 21 158 178 158 182 0.89
3 9 0.0017 0.35 12.9 0.1 1 21 394 414 394 415 0.95
4 9 1.7e-06 0.00035 22.3 1.6 1 23 1125 1147 1125 1147 0.99
5 9 7.5e-06 0.0016 20.2 5.2 1 23 1153 1177 1153 1177 0.92
6 9 1.9e-06 0.0004 22.1 0.1 3 23 1855 1875 1853 1875 0.97
7 9 0.0009 0.19 13.7 1.8 1 23 1881 1905 1881 1905 0.92
8 9 0.0016 0.32 13.0 3.3 1 23 1926 1950 1926 1950 0.93
9 9 0.041 8.4 8.5 0.3 1 23 2108 2131 2108 2131 0.95

Sequence Information

Coding Sequence
ATGCGACCTCGAGCACTTGGTATAATCGTCGTCGCATACGACAGATATTATCCGAACCAACGATCCTATCATCATCAGACCCACACTGTGGCGATGACAGACCCACAGCTGActaacaacaacaacaacaacaacaacaacaacaataataataataacaacaacaaCGATGGCGAGCCAAAGTACCTGCACAAGAAGTTCAAGAAGATGGCGACGACCGAAATCGCGCCGAAGGTCGTCGAGTCGAGAAAGGAGACGAGCAACATCGAGACGCCCAAAACGCGGAAAGACGTCGACAAGGAGTCGCCGAAGGAGTCCGGCCACAAGCTCGAGGTCTCTCCGGAACCCGAGGGGACCGAACCCGCCGCCGAGTCTCGGAAGAGCGGCCATACCTGTCCTTATTGCAAGCTGACGTGCGCCAAGCCGAGTGTTCTTCAGAAGCACATCAGGGCGCACACAAACGAGCGGCCCTATCCGTGCAAACCATGCGGATTCGCTTTCAAGACCAAATCCAATCTGTACAAGCACTGCAGGTCACGCTCCCACGCGCACAAGATGGAAAAGGGCGACAAGatgTCTGAGGATTCCGATATAAGCCTGTCGGACAGCGCCAGTAATGGAACTGGTACCCCACCCCCGCCTCCCGTTTCGACGCCcacgacgacaacgacaacAGTATCTACGGCCGCAGTGAAGATTGTGAAAACCGGCAAGATATACAAGCCGAAGTTTCAAGCTCGAACGGCTCTACAGTGCGTCAATAGCGATACGGAAACGTCTTCCTTATCACCCAGTTCTTCCAGTAgttcctcctccttctcctccatGACTACTTCCGCTTCCAATTCCGTCAAACCGAACGCGGAACAGTTGCAGGAGCACATCGACAAGATCATTACGGACAATCAGGCGATTGTCGATGCGGTGGACCCACGATTGCACAAGTTAATGCAACGCCAGCAGAGTCTGGTGGAGACGAAGCAATCGTACGAGCAACAACCATTGAACCTGTCTTCCACCGAGGAAACTTCGAATAGCAGAAAGCGTTGCTACAGCGACAGCTGCGCTCAGGAAGCGAAAGAAGCCGCGCACAACTCCGAGAGTTCGATCATTAAAGACCTCCTCCTGAAAACTCGGGATTTCGCCAATGGCTCGATGCCGGAGATTACGTTGGAAAATTTCGTCTGCCCGACTTGCCATATTCCCTACACCAGCATAGACAACCTAGAGGCTCATCGTAAATATTACTGCAAAGGTGGTCTCCGAAGAGGAACGGACTATCAAGCAGAATTGGAAAAACGGGACTCCGACTTTGACCCCAAGTCTTCCGATTATTATGGCATTTTGCAGCCCCTGCCATCCCCAGGCCCTTTACTGGGCAATACTAGACTAGTCGACGCGTATGGGCCACCTATCAAGAAGCAGAGGACGGAGTCCGTGCCGACAAGCCTGAGGTCGCTGGAAGAGCTCAGCAAGTATCCACGTCCCAACTCGCTGCAAATGTTCGGCGGCGAAGTGAGGATCCTCGATAACACGGGCGAAGTGACAAAGACGATGCGGATCGAGCCGCGACAGACCAACTCGCCCACGAACGATCACATAATCAGTGCCAATTGCGTGACCTCGGAGACGGCGTCGATAGTGGTGAGATCGGGGCTTCATTCCGGTGGTACCATGTTACACAAGTCGTCGAGTATGCCGGTTAGCACGCCCAATTCCTCCCTGTCCGACACGTCCAAGATGGCCTCGTCCATCATACCGAACATATCAACTCCCAACATAGCGCCCAGCATGTCTTGCTACAACTATTTGGAGCCGCACCTCAACCCGCTGACGAGTATCACTGCCTACAACCCGTTGACTTTGCCGCAAACGGGCATCACGAGCATTCTCCACGGCGACAAGGTGATACGTTACGTGCCCGGCATTCCTGGACCCCACACCCTGACCGGTACGCCGACCATAGACATATCCCCGAGTATAACGGCCGGCGAAGCCGGTTACAAGGTGATACCGGGCTTGCCGGGCTTGCACATGGTACATCAACCGCTGGACTTGGCCAATCCCGTGAGGCTACAACCCAATACGGTGCAGTCCGAGCCATTACCCGGACACGCTTCCTCGATATTGGACCAGCCCCTGGACCTGGCCAGTCCGGCGAAGGAATCGGCGAAGATCAGTTTTAAAACTCCCAGCGTTGACGGTCTGAAGAGCGACTTGATCGGTCCTAAAGTTCCTAGCGTCAAAGTCGAGACCTCAACGGACAAGCATCGCATGAGAATAATGACGATGCCTGTTAATAAAACGGAGCTGGATCGTCATATCAAGAATAATGCGAAGTACAAGAGTATGGAGAATCCGCGAGAGAGGAAGGAATTCACGTACGATAAGAGTCCAAAGGACAAGGCTTTCAGTTACCCGAACGGTATGGATCCCGCGACTTCGTCGAGTTCTTACAGCAAGCTAAAGTACACAAATACCAAGGTCATTTCGGAAAACAAGAAGAAACCTTCCAATTGGGGCGTCGATGAGGTAGACGCCAGAGATGTAGAGATGCACGTTGCTAAAGCTCGCGTCGCTAAATACGATCTACCGTCTCAGGAGAATGGTCGAGTGAAGAGTAGCATCCCCTCGGATGTTCGTGGCTGGTCCAAGGTGGACAGTTACATGTTCAACGGGGCCAAAATGAAGGCCGACAACGCGTCGGTGATTCTTGTGAACCTAGATTCTTCCAAAACAGAAGTGCCAACGAAAGCTTCAGCAGAGATAGTTGTTAAGGACAAGCAACCCGAGGCCAAGTCGCCAAAGAGCAACGGCGAGGTGGCTAAGGAAGCGACCGGCGCCAACAAGTTCTTGAGACCTACGTCCTTGCCGCTGAAACCCGGGACTTTCACGCCGAAGAAGCATCACGGGATCACGCCTACCGCGAACACGCTTCCTCTCATCAGCCCGGAGACCCCTCGACCGAAAAAGTCTTACGGGCAACTGTACTTGAACGGACACGCCTACACATATCTAGGACTGAAGTGTTCCACCAGAGTGTTCTATTGCACTCTGAACCGACCGCAGCCGATGTACGTTTCTCAGCAGCATGGTTTATCGATGTACTCCAACTGGAAGAGTAAGGAGGCACCGCTGGACGTGGACATGTCGCATTACGACTCTCGGCACAGGCCTCTCAATTACACCACTGCGTGGAAGAAACAGGAGGATATTCTGACGCACTCCTCGCACAGGCCAACCACTCCTACCAGTCCAGACAGTGGATTGGAGAATGATATGCAGGAGAAAGCGAAGAGAGTGAAGATATTCGACGGAGGCTTTGAGAGTAATGAGGATTATACTTATGTACGCGGAAGAGgTCGAGGACGCTACGTTTGTGAAGAATGTGGTATTCGTTGTAAGAAACCGTCTATGCTAAAGAAACATATCAGAACACATACAGATGTTAGACCGTACACCTGCAAGCACTGTACATTTAGttTCAAAACGAAAGGCAACCTCACGAAGCATATGAAGTCCAAGGCCCATTACAAGAAGTGCGTAGAGTTTGGCATAGTACCAGTCCCGACGACCGTTTGTGACGAGAATATCGACAAGGAAGCCATTGCGCGATTAGCAGCCGGTGGCGGCAACACGGAAGAGTCCTCAGAAGAGGAGGAAGATAGCGATGGCGAGGAAAGCGAAGAATCTGGTAGCGAGGAGCAGGAAGCGGCCCAAAGTCTATTGAGTCTTTCGCAACATAATGCGACAAACAGATTGCCAGGTCTACTGCCATCAGGCAGACCTATGACATATCCGTACGCGCTAACCCTACCGACGACCTCCACCGTGAATATTGTATCCACCGCGACCAGCACGTCGATAGTGAGCAGCCAAAGTATCGCGCAAGAGACGGCCCTGATACAAAACGAATTATCGCACCGTTACTATTTTCCATCGAGTCGCGACGCCACGGAAGAAACGAGAATCAGTGTTATTCAGTCATCGAAGAAGCACGATTCGGAAATCGAGATCGAGGAAATTACCGATGTCACCGAATTATGTCATCAACCCTCGCAACCCATGGATCTCACGACGAAGCAGACGGCTCAGCTGTTGCTCTCGCCAATCTCGCAGAGAGCCAGACCGGTGGACATATTGACTCCCGTTTCGGAACCGGTCCTGTTGCAGACGATAGTCCAAACGATGGAGCGATTGCCTATACAAGGTAGAGAATGGAAGCCGAACGCGGAGGGTCACATGCTGCAGGCGTATCTCACGGAGAGGCACATGATGGATAGCAAAATGAAGCAGCAGTATCGCGTGGGAAGCACCAAGTTGGACAACAAACAGGAAAGGGATGTTTATCCACAGCACCAGGACGTCGGCAGATCTAGACACGTGGACTCCAACGGTACTCCATCGGTGACGTATACCGATCCCAACAAGATGCAGCACTCTGTTATAGATTCTAGAATCAAGCACGCGACGAAACACACCAGCGAcgatattaaaatggaaattaGGGAAAAGATTTATCTCAACAATATGGCGATGGAGAGACGGATGTTCGATTACGGAATGATTCCTAATCACAAGGATAAAAAGCAGTCCGATTATCTGGCTTCCGAGCGTGAAAATTTTGACCTTCTAAATCCCCCTGGTGCAGGGGGAAATTTCGAATACGGGTTACCTATGAGCAAGACTAGCAGCTCAATGGAGAGGTCGATCTCCACCGCATCTATCCGCAGCACGCCCAGCATCGATCGCCACTCGCCGAAATCCCTAAATCTGGACAACCGGCCACCACTGATGCAACACGCGAACAACGAGATTGACAGGAGCTCCATGTTCAATGCGATGAAAATGATGAGCGAAGTAGAGAGGTCCAGGGAATGTCCCACCATCGGTCAGGAAATGAGGCCTGCGAATCACGAGATGAGACACACGACTGGCGATGGTCGAATGCCAAGTCCCCGGAATCTCGATCTGAGGCCGCCCAGTAGAGAAATCAGGACCCCTGGTCAAGAGTACAGGGCGCAGAGTCACGAACTGAGGCTACCGGGTCAGCAGGAGTACAAGATGCGCGGCCAAGAGATGAGATCGCCCAGTCGCGAGTACAAGCCGGCGTTCGTTCATGATATGCAAGTTATTCAGGAGCTCATGCCGTCGACGAACGTGGAAATGCGCCAGGCAAATTCGGATAACAGGCCACCGAGCAGCGAGATGAGAACACTTTTGGAGTATAGAGCGCAGTCCCAGGATATCCGTGTTAACTATGAGATGATGCAGTCGCCCATGCACGAGGCGCCCAAGTCGCAGAACGTCGACGCGAGAAACACGTCGCCGCAGGAAGCCCGAATCATCTACTACGACGCGAAACAGACCACGGATACCGTCAAACAAAATACGCAGGATAATATGAAGCGAGCAGTGGCCAGGAAGATAGTTGTCGGTGGCCCAGACTTTCGATCGCCGTCACCGAACACAGGAAATTCGAAGCCGCAAGCGGAATTTTTACAGCCATCGAGCGGGCCTGCGCCTAACTATGTTAGTTTGACAGAAGATGGTAGGAGTATATGTGGAATTTGTAACAAGGTGTTCAACAGGCCTAGTCAGTTACGGTTGCATatcaatattcattattttgaaCGGCCATTCAGATGCGAAAGTTGTGCAGTTTCCTTTCGGACTAAAGGCCATTTAACGAAACATGAGAGATCCGTTTCTCATCATAATAAGgtCAGTATGACTTCCACCTTTGGTGCAGCGACCAGCAGCAATCCCAGGCCCTTCAAATGTACAGATTGTAAGATAGCATTCAGGATACACGGACATTTGGCCAAGCATCTTCGTAGCAAGATGCATATTATGAAGTTGGAATGTTTGGGCAAATTACCATTTGGAACATTTGCGGAAATGGAAAGATCTGGTGTCAATTTGAATGACATCGACACGACAGACTGTGATAATAGTCTTAATAGTCTGCAGATGTTGGCTCAGAGATTATGCGGGAAGGATCCTGCGAAAATCGCGCAATGGGATTCGGAGACAATGCCCGGCCCGGTTGTGAGCGGTGGCGAGACTTCGTCAGACGAGGGTGAACCTATTCCGCAGCACGCACTTCACGCACAATATGTAAAAGCGACGACGGACGCGGATGTTTCCCGATCATATCACGTGCCAATCATTAGCGAAGAACCGAAGGTCATTAACGATGCTCGTCTACGCAGTCCTCAGTTCAATCAGCAACGACGTGATTACGCTGTTAAAGAGCAACGAACAATCCCGGGCGTCGTTTCGATAGAGAACACGAGGGCGGAGGACAATTTACAATCATACAAGTGCCAAGTTTGCTCCGTATCTTTGCGTACCGTGAACGAGTTACAGGTACACCGTTTTGTTGAACATAATATCGAGCCAGATTCTAGTACAAATATCCATGGGGATAGGAGTGCGGGTAAAAGTAGGGAAAAGGAGAATACTCAGAAAAGAATCGCAGAAGAGTCCGCGACGAAGGAAGATCATGTTAGGCCAAGACTAGAAGATACATAG
Protein Sequence
MRPRALGIIVVAYDRYYPNQRSYHHQTHTVAMTDPQLTNNNNNNNNNNNNNNNNNNDGEPKYLHKKFKKMATTEIAPKVVESRKETSNIETPKTRKDVDKESPKESGHKLEVSPEPEGTEPAAESRKSGHTCPYCKLTCAKPSVLQKHIRAHTNERPYPCKPCGFAFKTKSNLYKHCRSRSHAHKMEKGDKMSEDSDISLSDSASNGTGTPPPPPVSTPTTTTTTVSTAAVKIVKTGKIYKPKFQARTALQCVNSDTETSSLSPSSSSSSSSFSSMTTSASNSVKPNAEQLQEHIDKIITDNQAIVDAVDPRLHKLMQRQQSLVETKQSYEQQPLNLSSTEETSNSRKRCYSDSCAQEAKEAAHNSESSIIKDLLLKTRDFANGSMPEITLENFVCPTCHIPYTSIDNLEAHRKYYCKGGLRRGTDYQAELEKRDSDFDPKSSDYYGILQPLPSPGPLLGNTRLVDAYGPPIKKQRTESVPTSLRSLEELSKYPRPNSLQMFGGEVRILDNTGEVTKTMRIEPRQTNSPTNDHIISANCVTSETASIVVRSGLHSGGTMLHKSSSMPVSTPNSSLSDTSKMASSIIPNISTPNIAPSMSCYNYLEPHLNPLTSITAYNPLTLPQTGITSILHGDKVIRYVPGIPGPHTLTGTPTIDISPSITAGEAGYKVIPGLPGLHMVHQPLDLANPVRLQPNTVQSEPLPGHASSILDQPLDLASPAKESAKISFKTPSVDGLKSDLIGPKVPSVKVETSTDKHRMRIMTMPVNKTELDRHIKNNAKYKSMENPRERKEFTYDKSPKDKAFSYPNGMDPATSSSSYSKLKYTNTKVISENKKKPSNWGVDEVDARDVEMHVAKARVAKYDLPSQENGRVKSSIPSDVRGWSKVDSYMFNGAKMKADNASVILVNLDSSKTEVPTKASAEIVVKDKQPEAKSPKSNGEVAKEATGANKFLRPTSLPLKPGTFTPKKHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVSQQHGLSMYSNWKSKEAPLDVDMSHYDSRHRPLNYTTAWKKQEDILTHSSHRPTTPTSPDSGLENDMQEKAKRVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCTFSFKTKGNLTKHMKSKAHYKKCVEFGIVPVPTTVCDENIDKEAIARLAAGGGNTEESSEEEEDSDGEESEESGSEEQEAAQSLLSLSQHNATNRLPGLLPSGRPMTYPYALTLPTTSTVNIVSTATSTSIVSSQSIAQETALIQNELSHRYYFPSSRDATEETRISVIQSSKKHDSEIEIEEITDVTELCHQPSQPMDLTTKQTAQLLLSPISQRARPVDILTPVSEPVLLQTIVQTMERLPIQGREWKPNAEGHMLQAYLTERHMMDSKMKQQYRVGSTKLDNKQERDVYPQHQDVGRSRHVDSNGTPSVTYTDPNKMQHSVIDSRIKHATKHTSDDIKMEIREKIYLNNMAMERRMFDYGMIPNHKDKKQSDYLASERENFDLLNPPGAGGNFEYGLPMSKTSSSMERSISTASIRSTPSIDRHSPKSLNLDNRPPLMQHANNEIDRSSMFNAMKMMSEVERSRECPTIGQEMRPANHEMRHTTGDGRMPSPRNLDLRPPSREIRTPGQEYRAQSHELRLPGQQEYKMRGQEMRSPSREYKPAFVHDMQVIQELMPSTNVEMRQANSDNRPPSSEMRTLLEYRAQSQDIRVNYEMMQSPMHEAPKSQNVDARNTSPQEARIIYYDAKQTTDTVKQNTQDNMKRAVARKIVVGGPDFRSPSPNTGNSKPQAEFLQPSSGPAPNYVSLTEDGRSICGICNKVFNRPSQLRLHINIHYFERPFRCESCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATSSNPRPFKCTDCKIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTFAEMERSGVNLNDIDTTDCDNSLNSLQMLAQRLCGKDPAKIAQWDSETMPGPVVSGGETSSDEGEPIPQHALHAQYVKATTDADVSRSYHVPIISEEPKVINDARLRSPQFNQQRRDYAVKEQRTIPGVVSIENTRAEDNLQSYKCQVCSVSLRTVNELQVHRFVEHNIEPDSSTNIHGDRSAGKSREKENTQKRIAEESATKEDHVRPRLEDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2