Basic Information

Insect: Camponotus fellah
Gene Symbol: -
Assembly: GCA_030586385.1
Location: JAPIVC010000779.1:3050707-3053040[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00098 0.2 13.6 0.6 1 23 370 393 370 393 0.96

2 10 7.4e-06 0.0015 20.3 0.5 1 23 399 421 399 421 0.99

3 10 1.4e-07 2.9e-05 25.7 0.3 1 23 427 449 427 449 0.99

4 10 0.056 12 8.1 1.8 1 23 455 477 455 477 0.98

5 10 9.8e-06 0.002 19.9 0.3 1 20 483 502 483 503 0.96

6 10 0.026 5.5 9.1 2.3 1 23 512 532 512 532 0.94

7 10 1.6e-06 0.00032 22.4 0.5 3 23 540 560 539 560 0.98

8 10 0.00016 0.032 16.1 1.4 1 23 566 588 566 588 0.98

9 10 0.0017 0.35 12.9 3.4 1 21 594 614 594 617 0.96

10 10 0.11 23 7.1 3.9 3 23 625 646 623 646 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00098	0.2	13.6	0.6	1	23	370	393	370	393	0.96
2	10	7.4e-06	0.0015	20.3	0.5	1	23	399	421	399	421	0.99
3	10	1.4e-07	2.9e-05	25.7	0.3	1	23	427	449	427	449	0.99
4	10	0.056	12	8.1	1.8	1	23	455	477	455	477	0.98
5	10	9.8e-06	0.002	19.9	0.3	1	20	483	502	483	503	0.96
6	10	0.026	5.5	9.1	2.3	1	23	512	532	512	532	0.94
7	10	1.6e-06	0.00032	22.4	0.5	3	23	540	560	539	560	0.98
8	10	0.00016	0.032	16.1	1.4	1	23	566	588	566	588	0.98
9	10	0.0017	0.35	12.9	3.4	1	21	594	614	594	617	0.96
10	10	0.11	23	7.1	3.9	3	23	625	646	623	646	0.97

Sequence Information

Coding Sequence: ATGATCAGCATGCAGCAGCAGACAGTCTTTAACCAGGTAGCCGGGTCCGAGCAGCCGCAGGAGGAAGTTCAGCTGACCGAATTGCTACCGGTGAAACAGTCGCGTATCagggaaaatattttcaaggaCGGTGATGCGACTGACGCTCTGAGAGCACTGAGAAGTTTTTCAGGCGATTGCGGCGACGGGGAAAGCTTCGAGTTGCGGGATTACAACTTCTGCAAAAGCATCGATCAATCGGAACGTCAAAATAACGGTAAGCATCGACGAACGGAAGCTCGTCGAAGAAGAACGGGCGAACTCAGGAACAATGCTGAAGACGTAGGCTCCGATGAAGAGAAACATGACGACGAGGCGATGGGAAAGAACGCGAAGAAGACACGAACCGGCAAGAAAAACGTTCGAAAAGCACCGAAGAGAAAATTGGCGAGATCAAGCAAAAGGAAGGATGACGACAGGGATAGCGAAACGAACGAGAAATCCATCAGGAAGAACCCTGCCGGATGCGACGAAGAATTCACGCCCGATTACGATGAAGAGGACGTCGACGAACAGTTGTATTTGGATTTAGATAAAAGAGATTGTTTTAAAGAtgaagtatatgtatataggcgAGAACCGCTGGAGCCATGCTCGGGCTCGGAACCGGAGGAATTGGGAACGATCCAAGATCGCGAGATCCAGCAGGACTTTTGCGAGAAGGATTACTCCACCACGGATGGCGATTTATTCGACGGGACTGTTAGGCGGAAAAAAAGTTTCGCCAAAAACAAGAACAGCGAAAAAGGAAAATGCGAGACATCAAATATCGACGAAGCTATCGAGAAGGAAAATTCTGAGAAAGAGCTTAGACTGAAGATCGATGCCATCATTCAAGCGAATTACCTGCTGGAGCGCGAGAACAACAACGTCGTTGGTTCCGAAAAACTGAAAATCGCGGAGAATATTAGCAACTCCTCCACTGCCGCATCGATAAACACGGAGAGTAGCGATAGCTCCCTATGCAATTCTATCGAAACGAAGAAGACgacgaagagaaaaaagaagaagaagaagatcgAGCAGAGAGATTCGCAGATGAAGGATCAGCAAAATCCCCAGAAGAAATACTGTTGCGTCGTATGCGACGCGCGCTTTAAGGGTAGCGGTGGCCTGCGAAATCACTACAAGGTAGTGCACGGCGCCGGACCGGTGTTCAAATGCGACGAGTGCGGCAAGGAATTTCCGCTGAAGGAACGGCTGAAGCTGCACGTGCGCACGCACACCGGCTTCAAGCCTTACAAGTGTCCAGAGTGCGATAAAAGCTTTGCGCGAGGCGGTCAGCTGGTGCAGCATCGTCGTACGCATAGCCAGGTCAGGCCGTTCCGTTGCGGCTTGTGCTCCAACAGCTTTACCTGCGCGGCAAATCTGTCTCTCCACGTGAAGCGTCACAACGGCCAGAAGGATCACAAGTGCGATCTATGCGGACGCGCCTTCGTGCGCCGCGACGCCCTGAAGAAGCACCTGGAGTGTTTACATCGCGACGTCAAGTCATTCCTCTGCGCAATCTGCAACAAGACTTTCAAGGGTCACCTGCCGCAGCACATGAGGACGCATGCACGCGATCGTCCGCACGGCTGTGCCACGTGCGGCCAGCGATTCGCTCAAAAATCTCAGCTGACTGTGCACCAGAGGACCCATTCTGGTCAGCGGCCTTTCCGCTGTCTCGTCTGTTGGCAGGCCTTCGCTCACTCGACCGCCCTAAAACTCCACACTCGCCGTCACACCGGCGAACGACCCTTCAAGTGCTCCGAGTGCAACGCCGGCTTTACTCAGCTCCCTCATTGGAAGAAGCACATGAAGTGTATACACGGTAGGAATGATCCGTACGGTTGTAAACGTTGTAAGAGTTTTTTTAGAATCAAGAGCGATCTGGAAAATCATGAGAAGACCTGCCATCCGGAGATGGAAGTGGAAGATGACGGTAACGGCGTTGCCAGCAAACCGATCGGCGGATCCGAGATTATTGAGAAGAACTCGGTCACCGCAAAGTATAAACTGATGACAGTGGAAAAGATGCGGTTGTTATTAGCGGTGCTGCTCAAGAGGATCAGCAAGCAGGAGCGATTGGACGAGCTCGGCTTCGGTAAACGTCTCATCGATGATGTTCTTCAAGACTCGCTGGTGTCCGCTGGTAAGGAACCGGTCACGGGGGGTGGTTTGTCCGAGCTCGAGGCTCTCACCCGAAACCTGGAGATCTTCTTGGAGTGGACGGTGCCGAAGGAACACTGGGAGAATTTCCGTAGGATGAAAAAATCGCCAGAAGATATTTTGGAAGCACTCACGGCTACGTAA
Protein Sequence: MISMQQQTVFNQVAGSEQPQEEVQLTELLPVKQSRIRENIFKDGDATDALRALRSFSGDCGDGESFELRDYNFCKSIDQSERQNNGKHRRTEARRRRTGELRNNAEDVGSDEEKHDDEAMGKNAKKTRTGKKNVRKAPKRKLARSSKRKDDDRDSETNEKSIRKNPAGCDEEFTPDYDEEDVDEQLYLDLDKRDCFKDEVYVYRREPLEPCSGSEPEELGTIQDREIQQDFCEKDYSTTDGDLFDGTVRRKKSFAKNKNSEKGKCETSNIDEAIEKENSEKELRLKIDAIIQANYLLERENNNVVGSEKLKIAENISNSSTAASINTESSDSSLCNSIETKKTTKRKKKKKKIEQRDSQMKDQQNPQKKYCCVVCDARFKGSGGLRNHYKVVHGAGPVFKCDECGKEFPLKERLKLHVRTHTGFKPYKCPECDKSFARGGQLVQHRRTHSQVRPFRCGLCSNSFTCAANLSLHVKRHNGQKDHKCDLCGRAFVRRDALKKHLECLHRDVKSFLCAICNKTFKGHLPQHMRTHARDRPHGCATCGQRFAQKSQLTVHQRTHSGQRPFRCLVCWQAFAHSTALKLHTRRHTGERPFKCSECNAGFTQLPHWKKHMKCIHGRNDPYGCKRCKSFFRIKSDLENHEKTCHPEMEVEDDGNGVASKPIGGSEIIEKNSVTAKYKLMTVEKMRLLLAVLLKRISKQERLDELGFGKRLIDDVLQDSLVSAGKEPVTGGGLSELEALTRNLEIFLEWTVPKEHWENFRRMKKSPEDILEALTAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01077690;
90% Identity: iTF_00265212;
80% Identity: -