Basic Information

Gene Symbol
ZFX
Assembly
GCA_030586385.1
Location
JAPIVC010000835.1:714870-720165[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.9 4e+02 3.2 0.1 3 23 15 35 14 35 0.94
2 15 1.4 2.9e+02 3.7 3.8 1 23 973 996 973 996 0.81
3 15 0.00061 0.13 14.2 1.9 2 23 1084 1106 1083 1106 0.96
4 15 0.012 2.6 10.1 0.1 2 23 1119 1140 1119 1140 0.98
5 15 2e-05 0.0043 18.9 2.3 2 23 1143 1164 1142 1164 0.97
6 15 0.014 3 9.9 0.3 1 23 1170 1192 1170 1192 0.95
7 15 4.1e-05 0.0085 17.9 4.4 2 23 1199 1220 1198 1221 0.95
8 15 0.13 26 7.0 3.7 5 23 1234 1252 1233 1252 0.97
9 15 2.6e-05 0.0053 18.6 1.5 3 23 1259 1280 1258 1280 0.97
10 15 0.012 2.4 10.2 0.3 2 23 1296 1316 1295 1316 0.97
11 15 7.7e-05 0.016 17.1 0.7 1 20 1322 1341 1322 1344 0.92
12 15 9.6e-05 0.02 16.8 2.7 1 23 1352 1374 1352 1374 0.99
13 15 0.0027 0.56 12.2 3.2 1 23 1380 1402 1380 1402 0.97
14 15 4.9e-06 0.001 20.8 3.9 1 23 1408 1430 1408 1430 0.99
15 15 0.0017 0.35 12.9 6.3 1 23 1436 1458 1436 1459 0.96

Sequence Information

Coding Sequence
ATGGAGCTCAGTGGTGCGGGAATGCCCGTTGGGGCAGTCGCCTGCCCCGTGTGTACCTTGTACCTGCGCGAGGGCATCAGTCTGCAGAAGCATCTGGACACCCATCCCAAGGAGCAGGTTATAGATGCTCTCATCAAGGCTAGCACCTCCTCGATTCAGACGCttcagcagcagcaacagcagcagcatcatcagcagcagcagcagcagcagcagcaagcTACCCCGACATCGTTACCGGTATCGCTGCAACCGCAGGCTTCACCGCAAACCCCTACCTCTATTCAGGCGCCTCAAGCGTCGCCCCAAGTTTCGCAGAATTCCGCTCATATTTCCACTCATTCGCCGTATCCCATAGGACCCATCTTCGAATGTCCGCCCATTAATACCATGATGCCACCGCAGTTCACGTCGTTCAGCTATCAACAATTTGTCAACAATGGGACCATGATGATACCGCAGTACACGATGGCGCCGCAGGCCAATCAGATGATGCAGATGCTGTACAATCCGTACGGTATGTACCAGCAGCAACAAATACCCACCGTCCAAATGATCTCACCGGTTGCAGCTATCCCCGGCGCCGCGAGGATTCGACCAGTGGTAACCATGGCCGGAGAGAGCAACGTCAGAACCGCTCTGGCGATTCCTGTAAATAGTCCCGAGCCGAAGCAGATCCTGCCTGAGATTTTGCCCGACACCGAGCCTGAATCCGGGCAAGTTATGCCGGATGTCAACCTGCCGGCCTCGCCTGTGCTGCAGAACGAGGACGTCTCCGTCAGACAGGAGGAGAGCGCCAGCAATGCGTTGCCGATCGATCACAGAGGACAGCAGATGCAAGGCACCGCGTCGTCTGGTGAAAGTACAGTGCAGCACGGGTACAATACTATTCCTAGATCCATCACGATCGCTTGCGCCATGAATAATACCGACGACGATAAAGTGGAGAGTGTTCTACCGGATATGGAGGACGAGGAGCCATCGAATAACATCTCCACCGTCGACCTGCAGTGTAAATCTATAACGTACGAACAACCTGAAGTACAACAGTTTGCGCAAGTTATACAAGAAGAATACGTGAGTGTATGCAGTAGGAAAACTAACGCAACGAATGATGTTGATTCTATGACGTGCGAGCACGAATCGGAGATGATGAGCGATGAGAGACCGGCGAGCCGCAATAGTAGTGTCAGTGTCAGCAATAACGTTCCATCGCCGCGAGATCCAGTAACGATAGACGCCTTGAAAGACTCTATTCAACCCGAGCTTAATTCGGTGGAGAAGTTGGAGAATTTGATAACGATAATGGAAACCGAACTTAATAGTGCTTCGCTGCAAAAGGAAAATAGTTTATCGAATGATCGGGAGAGATTAGATACGAGGGAGAAATCGGATAGGGAAGAGACCGTGATTCACGATACCGTAGTGACAATTCTAGGCTCTCACGAGAAGAATCACATATTGCCTGATATACAAAAGGATAACAACACATGGTGCCCGAATGATTATGTAGATAACGAACTGAGAACGCTAGAGAAAACTTGTCGTTATTTGTCATACAATACAGAGTGCCCGAAAGTAGATGAAAACGAATTGAAAACGctagagaaaaatttacatttatataagtataagcATAGTTTTTCAGCACCCCCGTCTCCTGTCACGAGGAAGAAGTGCCACAAGATCACACGTCATTACAGCGCGCGATCGGAGCTCGGATCCTGCGAAAATCTCAGCTCGTATCACCATCGTATTGGCTTtgacgaggacgaggacgagAACAAGAACGAGGACGATGACGAGAACGAGGACGAGGAGGACGATGAGGAACTGGACGAGGACGAAAAGATCGACGAGGAGGATAATTTCGACGAGGCGGACATGGAGATCGAGGAGATTCCCAGTCCGCATACGCCTTTCGCGGAATGCGGCGTCAGATCGCACACCCCACTGTCCACGATCAGCGGTATTTCCGTGTTAAGAGTTAGAAAGGATCTCAGCAAACCATGCTCACCCACATCCATACATTCGTTTCACCATGTGGACAGTGATAGCGTAAGTCACGACGAGGATAGTAATGGTGTAGATAGTAATATTGTAGATAATATTGCAGAGAAAGATCCGATTGACTGTTCCCAAATTGAGGAGAAGATTAAGACTGATCATCAGCATCAGGAGGCGCGCGCGGCGGTGTGCGAAAATGTTGAGAAAGTTCAAGAATCAAGTAATAGTAATAGTTATGCGTACCAGCAGTCAGTGATAACCGAGCACGTTAGTTCATTTCCTGTGATGCACTCGCAGCCACCTGTCTTGATGCACGAGTCGTATTCCGCGACGAGCAAGACGCAAAATCTCTTGAACTTGTCCGAATCGATTAATCCTACAACCAGCACTGAATCCAAGAGCTTTCATTCTACCAAATCTACGTTGTTGCCGAAGCAATCGATGGAACTGCTCAACATAAACGAAGACGCTCACGCTGGACCGATGAACGTCTTTGAATTTGACGGACTACAAATATTAGTTCCTAGTACATTTATAAGCGATTCGTCCCAGAAAGCGGTGAGTGCGACCAGCCAGCAATCTATGGCAAGTAGCGAGGGTGCAATTGGTATCGATGAGGAAGTGAAGAGCATTAATATGCGTGCCGATGAGACCATGCCGCCTAGAGGTGAACTGTCCGAACAAGAGAGTAATGGATGCACAGAGCCGTCTGCATGGCAGttTTACATGGGTCAAGAATCTTCGCGTATGTCCACCTCTTACGATCTGCTGGCACGAGAAAGCTGGGAAGAATCGGAAGGATCCGACAACGAGATTAGCGGCCCGTTGTTGGATAGTAGATCGTTGGCCACGCACTTCACTTCGAGTCTGTTTCTGGACCGAGACCGGAAGACACCGACTAAACGGACGTTCAAGTGTTCTCACTGTAATGAGGTATTTGATTGTCCAAAAGAACGCAGAGTTCACAGTACAACGGTACACAAGGAGGCAGTGCCTAGTAGCAGCAGAGATCAACTGGATCAGTCAGAGATGAAGGACATCAAGTTACTAGACAATCGCGTAAATGTGTTCGACGATATATTTGTGCCGGGTCTACACATGCAACAGATGTATCACCATCAACAACCGCTCCTGCACCAGCTACAGCCACCACCTTCGCAGCCTGGATCGGATGGTTTGACTAAGGCTGAGGCCGATCAAAAGATTGGCGAGAATCTGGTGATACCGTCGAGCATCGAAGTGACCTGCGCGATATGCAGCCAACGATTTAGCAGCGAGAAATCTCTGCAGATACATCACCGGCGTATGCACCTAGCTGAGGTGAACAAACGCATACGCGAAAACGCCAAGTGCCAGATATGCAACGAGGAGTTCCCGTCAGTGTTGTTGTTCAACGCTCATCTCAAGATACACCCGTTGGAGTGCGGACAGTGCGGTAAGTATTTTTATCGGAAGCAGAACTTCAAGCTGCATATGAAACGACACTTGGGCATCAAGCCGTTTCCGTGCACTGTGTGCGACAAGGCGTTTCTCACCAAGCAAAAACTGGACGAACATACTAACGGCCACACCGGTAACGCGCCCGTCAAGTGTAGTTTGTGCAACGAGACTTTCCGCAGGTATTCGAATTTGACGCAGCACAAGAACCGGCATCACCTCAACATCAAGAAGAAACTCAAAGACTATATATGCCATTGCGGTGAAGTGTTCCACACGAAGAAGAAGCTCGCCTGGCACAAGGAGACGCACGACGAGAAGCCCAAGGCATGCACGTATTGCAACGAACGATTCATCCATATGGCCAGTCTGACTCGTCACATGCGTCGCGCTCACAATCGCCGATTCGTTCCTGACGCGCAGCGCGAGAGCGAGAACGTCGAGTGTCCCATTTGCAAGTGCATCTACCTACGATCGTCGTTGGCGGTGCACATGCGCGTCCACAACGGCGAACGACCGTACGAATGTCAGGTCTGCTCCAAGGCGTTCAGCACCAAGTGGAATCTACAGTTACATAAATGGACGCACGCGGCTCGCAGCACCAAGCCGTTCAAGTGTAATCAATGCAGCGCTGCCTTTTATCGTCACAGCGACTACACGGCGCACATGAATTCCCACCGTAACGTGCGTCCCTACACGTGCAATTATTGCGGCGCGCAGTTCATTCGCAAGTACAATTGCCTGCGACATGTCAAGGAGCACGAGGAGAACAAGGCGTACACGTGCGACGTGTGCAACAAGACCTTCCATCGCTCCTACTATCTCAAGGAGCATCTGCGGGTGCACTCGGGCGCGCGACCGTACACGTGTCATATCTGCGGCAAATCCAGCGGCACCAAGTCCAATCACAACAAGCACGTGCGAATCCATCACGCGCGCGAGCCTGTAAATaccgaaaattaa
Protein Sequence
MELSGAGMPVGAVACPVCTLYLREGISLQKHLDTHPKEQVIDALIKASTSSIQTLQQQQQQQHHQQQQQQQQQATPTSLPVSLQPQASPQTPTSIQAPQASPQVSQNSAHISTHSPYPIGPIFECPPINTMMPPQFTSFSYQQFVNNGTMMIPQYTMAPQANQMMQMLYNPYGMYQQQQIPTVQMISPVAAIPGAARIRPVVTMAGESNVRTALAIPVNSPEPKQILPEILPDTEPESGQVMPDVNLPASPVLQNEDVSVRQEESASNALPIDHRGQQMQGTASSGESTVQHGYNTIPRSITIACAMNNTDDDKVESVLPDMEDEEPSNNISTVDLQCKSITYEQPEVQQFAQVIQEEYVSVCSRKTNATNDVDSMTCEHESEMMSDERPASRNSSVSVSNNVPSPRDPVTIDALKDSIQPELNSVEKLENLITIMETELNSASLQKENSLSNDRERLDTREKSDREETVIHDTVVTILGSHEKNHILPDIQKDNNTWCPNDYVDNELRTLEKTCRYLSYNTECPKVDENELKTLEKNLHLYKYKHSFSAPPSPVTRKKCHKITRHYSARSELGSCENLSSYHHRIGFDEDEDENKNEDDDENEDEEDDEELDEDEKIDEEDNFDEADMEIEEIPSPHTPFAECGVRSHTPLSTISGISVLRVRKDLSKPCSPTSIHSFHHVDSDSVSHDEDSNGVDSNIVDNIAEKDPIDCSQIEEKIKTDHQHQEARAAVCENVEKVQESSNSNSYAYQQSVITEHVSSFPVMHSQPPVLMHESYSATSKTQNLLNLSESINPTTSTESKSFHSTKSTLLPKQSMELLNINEDAHAGPMNVFEFDGLQILVPSTFISDSSQKAVSATSQQSMASSEGAIGIDEEVKSINMRADETMPPRGELSEQESNGCTEPSAWQFYMGQESSRMSTSYDLLARESWEESEGSDNEISGPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSHCNEVFDCPKERRVHSTTVHKEAVPSSSRDQLDQSEMKDIKLLDNRVNVFDDIFVPGLHMQQMYHHQQPLLHQLQPPPSQPGSDGLTKAEADQKIGENLVIPSSIEVTCAICSQRFSSEKSLQIHHRRMHLAEVNKRIRENAKCQICNEEFPSVLLFNAHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCSLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSGTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01255007;
90% Identity
iTF_00280132;
80% Identity
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