Cfel001345.1
Basic Information
- Insect
- Camponotus fellah
- Gene Symbol
- ttk
- Assembly
- GCA_030586385.1
- Location
- JAPIVC010000001.1:8088081-8090009[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-13 8e-10 39.7 0.0 1 45 363 407 363 407 0.96 2 2 1 5.8e+03 -1.4 0.1 23 32 464 473 463 473 0.91
Sequence Information
- Coding Sequence
- ATGACGGACGACATGAGCTCGGCTCAAAAATACTGTCTTCGCTGGAATAATCATCGTTCGAACCTGCTGTCCGTCTTCGAGGACCTTCTGCAAACCGAGGCGTTCACCGATGTATCCCTCGTCGCGGATAACGGTCAGATCGTCAAGTGCCACAAGATCGTCCTAGCGGCATGCTCGTCCTACTTCCAGTCTCTGTTCATCGCTCTGCCGTGCCTGCACCCCACGATCATCCTCAAGGACGTTAAATATTCGGAGCTAAGGGCGATATTGGAGTACATATACCGTGGCGAGGTGAATGTGCAGCACGATCAGCTGAAGAACCTGCTCAAGATCGCGCAGATGCTGCAGATCAAGGGTCTGGTGGAGTACGATGACAACGTTGGACGGTTCTCGCATAACGAGAATTTTCATCGGCATGAAGATATGATGGAGACGTCCTTGTCACCACCGCCGACCATCAGCACCAGCACCAATGCCACTAATATGGCGGTGCACAACAGCGGTCATATGTCACCGCCGCACTCCACCGATGGCATCTACGGTGGTCTCTACAACAAGGGAACGACCTCGGGAACGACCTCGGACTTCAATCAAATGCAGAATCAATTTCCATACTGGTCGCTGCCCTCCTTATTGCATGCAAGTCACCAGTTATCGCCGCGCTCCTCTTCTATTCTTCCCTCGGCTCTCAGCGGAAATGGTGGCTCTTCCTCCTACGACGGCTTCAACGAATCGCTCAAACGCAAGAAGACGTCGCTCTTGAACCCGCCGAATCACGACACACCGATACTGCGCACCGTCCTCGGTCAGAGTCACGCTGACAGTTCCTTGGCTACATCGATGATGCAAACTGACAATCACGAGCCGATGCATCTTCGCTCCAGCAGCAACGGCTCCGCAAACGACGACAATCATCGCGGCAACATCGATTCGGCTCATAACGAGACGGCTCACTCCTCTCACACGGAGCCTTCCGTGGATGAGGATGAGAAACGGCCATCGTCGCAATCGCACACCACAAATATCAAGTCAGGTAATGGGACTCATGCACAATCAAAACCCGAATGGAAACGATACAAGCAATACACCCGAGATGATATCCAGGGAGCGATCGAGGCGGTAAAGAGAGGCATGAGCGCCGTGCAAGCCGCGCGCATGTACAACGTACCATCCCGTACGCTTTACGACAAGGTGAAGAAGCTCGGCATCCCGACGTCGCGACCACTCAAGCGTTCAACAAGCAACGGCGATAGCACGGCTTCTTTCCCATTCGACGTCGGTGCTAACGTGAACGGCAGGATTTACAGTGGCAGCATGCTATCCAAAAACGAGAACGAAAATAGCGGCAATATCAAGAACTTCGAGCACTTGTCTATTAGCCCATCGAGCGCGAACGCGTACGATGTCGCTTATAAGACGTCAAAGGATACGTCACAGGATCACGATTCGATGTCTGATTCGGCACGCTACAGCACAAGTCCGGTTATGCGCTGCCCTAAACAAAAGCAACAACAGCAACAGAACGTCGAAGATGAAGTGGAAGATCTATCGGTGAATCGTAAGTCTGATGTTCCAGTGATAAGGCTAACATCGGACACGGTCAAGGACGAACCGCAAGAAACTGGGCCGAACAGTGATTGCGGCGATTATAGTTAA
- Protein Sequence
- MTDDMSSAQKYCLRWNNHRSNLLSVFEDLLQTEAFTDVSLVADNGQIVKCHKIVLAACSSYFQSLFIALPCLHPTIILKDVKYSELRAILEYIYRGEVNVQHDQLKNLLKIAQMLQIKGLVEYDDNVGRFSHNENFHRHEDMMETSLSPPPTISTSTNATNMAVHNSGHMSPPHSTDGIYGGLYNKGTTSGTTSDFNQMQNQFPYWSLPSLLHASHQLSPRSSSILPSALSGNGGSSSYDGFNESLKRKKTSLLNPPNHDTPILRTVLGQSHADSSLATSMMQTDNHEPMHLRSSSNGSANDDNHRGNIDSAHNETAHSSHTEPSVDEDEKRPSSQSHTTNIKSGNGTHAQSKPEWKRYKQYTRDDIQGAIEAVKRGMSAVQAARMYNVPSRTLYDKVKKLGIPTSRPLKRSTSNGDSTASFPFDVGANVNGRIYSGSMLSKNENENSGNIKNFEHLSISPSSANAYDVAYKTSKDTSQDHDSMSDSARYSTSPVMRCPKQKQQQQQNVEDEVEDLSVNRKSDVPVIRLTSDTVKDEPQETGPNSDCGDYS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00264399;
- 90% Identity
- iTF_00264399;
- 80% Identity
- iTF_00264399;