Cfel029651.1
Basic Information
- Insect
- Camponotus fellah
- Gene Symbol
- lov
- Assembly
- GCA_030586385.1
- Location
- JAPIVC010000573.1:1150730-1154900[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4 3.1e+04 -3.8 0.1 4 19 350 364 348 366 0.69 2 2 2.2e-16 1.2e-12 48.7 0.0 1 44 530 573 530 574 0.95
Sequence Information
- Coding Sequence
- ATGTCGAGCGTCGGGAATAGTCCCGACAGGATGGGTGTCCAATCCCTCTACTCTTTACGGTGGAACAATCATCAAGCCCACATACAACAGTTCTTTCAGGAACTGCTACACCAGGAGAATCTGGTCGACGTGACCCTGATCTGCGCCGAGAGCAGCGTCAAGGCACACAAAGTCGTCCTCAGCGCCTGCAGTCCTTTCTTCGAGAGGATATTCGCGGAGAATCCATGTAAACATCCCGTGATTGTTCTGAAGGACTTTTCGAATCATGAATTGTCCACTATAATCGACTTTATGTATGGCGGCGAGGTGAAGATCGCTCAGGAGGAATTGCCAGGTTTGATGAGAGCCGCGGAATGCCTGCAAGTGCGCGGTCTATCGTCGTCGGAACCTAGACTGGTGTCGGAGGAACCCAGACCGTCGTCATCTTCGTCGACGCTTCTGGAGTTTACCACACCGGAGGACGCGCGACACGGTACTCCGGAGGAGGACGACAACGCGTTGGAGAACACGAGGGAGATAAAGCCCACGCTGTTTCAACAAACGAGGGACCATCCAACCAAACCGCTCATTGGCCACATGAACTTTGGCATCCGTGAGAGCTGTAGCTCGCCACTGATGCCGCGTCGAAAGCAGGCGCGTCCGCGCCGACGTTCCGGCGAATTGCTGCCGCAGGACCTGAGCAGACGCTCGACTCCGCCGGCCAGTTTGAGTCCATTGCCGAGCGTTCTTAATCTCAGCGGGAACCAGCACCAggcgcagcagcagcaacagcatcTGCAGTTACAACAGCCTCAGTATTCTCAACAACAAATAATCAACAGAAACGATCAACAACAAATGATCAACGTTCAGCAGAATCAACAGCATCAGCAGCAGCAAGAAGACATGGCGGAGAATCTCTCGATGAAAAAGTCTTTATCGCCGAGCGGACTGGATCAGCATCGCGTCAAGACAGAGGGCAGCGAAGCGACGAGTAGTCCGCGCGGTTCGCCGCTTACGGGGACGAGTCTGCTGCATCCGGACGGTTCCATACAGGACATACCGGCGGCCGTAGCGGCGGCGGTCGCCACCGTGATACCGTCGATGTCTCTGACGCAAACGCAGCCCCCCGAGTACCTGACAAGCCTCGGCCATCTGGCGAGCCAATGGCTGCCCGGGCAGAGTCCACTGCCGCCGCCTCCACCACAGAGTCATCATACGCGCGAAGACAGTCCGCACGGGCCCGGTAGGTCCCATCCGTATcagcaacagcaacagcaAGAGTCGTCGATAGTATCGCGACGTTCCTTGGCGATGTTTACGCCATTGGACGGCGTGACTCTCGGCGGCGGACTTTTTTCTCACACCGCCACGTATGACAGGGCAGTTCTCCCGGACTCGTTTCTCACGGATAATTTCAAGCAGGAGACACTGCAGAACATCTTCGGTGCGCCAAATCTTGGTCCTCCTccgaaaaaaacgaaaaaacatCGGAGCGAAAGCGATGGGACGCCGCGTAGGTGGAACGATCACAACAGCCGCGCGCTCGCGGTAAACAGGCCAAAGGGGCAGCACAGTGCGCCGCGAGGTGGACCGCCGAGATCGTGGACGAATAACGAACTTACATTAGCTCTACAACATGTCTGGGAAAAGAAGCTCACCACATCGCAAGCTAGTCGCTTATTCGGCATTCCTTACAACAGCCTGCTGATGTACGTGCGCGGCAAATACGGGAAGAGTCTCAAGCTGGAACAGTTGCGTAGGAATTGTACCGGCGCCAACACTCCCGAGATTATGAACAACAATAACATCAAGCCCGTCCAGCAGTCAGCGCAGATAAGCCACGCGCTCGCGTTGTCGTTGCAACATTCAGACAACAGCGGCTTCGCTTCTCATCGCTCCCTAATCGGCGGCAATATTACGCAAGGCTTCTACCCCGCCGATTATGCCGCCGCGCCCTATCCCCTGGTGCATCTGTTACCTCCGAGCGAGCAGAAAACCTTCGAATCGTCCGCGAATTCGAGCGGCGACGGGGGTGGATGTCTAGGAGGTGGTGGAGATGGCGGTGGCGGTGATCTGACGAGTTCGCAGACCAGCGAAACACCGTCGCCTATAgtcgatcatcatcatcaccaggagtcgtcgtcgtcgtcgtcgatgcAACCGCAACCGACACAATCGGCGCCTACGTTGCTGCAACAGAACGGTTCAGATTAG
- Protein Sequence
- MSSVGNSPDRMGVQSLYSLRWNNHQAHIQQFFQELLHQENLVDVTLICAESSVKAHKVVLSACSPFFERIFAENPCKHPVIVLKDFSNHELSTIIDFMYGGEVKIAQEELPGLMRAAECLQVRGLSSSEPRLVSEEPRPSSSSSTLLEFTTPEDARHGTPEEDDNALENTREIKPTLFQQTRDHPTKPLIGHMNFGIRESCSSPLMPRRKQARPRRRSGELLPQDLSRRSTPPASLSPLPSVLNLSGNQHQAQQQQQHLQLQQPQYSQQQIINRNDQQQMINVQQNQQHQQQQEDMAENLSMKKSLSPSGLDQHRVKTEGSEATSSPRGSPLTGTSLLHPDGSIQDIPAAVAAAVATVIPSMSLTQTQPPEYLTSLGHLASQWLPGQSPLPPPPPQSHHTREDSPHGPGRSHPYQQQQQQESSIVSRRSLAMFTPLDGVTLGGGLFSHTATYDRAVLPDSFLTDNFKQETLQNIFGAPNLGPPPKKTKKHRSESDGTPRRWNDHNSRALAVNRPKGQHSAPRGGPPRSWTNNELTLALQHVWEKKLTTSQASRLFGIPYNSLLMYVRGKYGKSLKLEQLRRNCTGANTPEIMNNNNIKPVQQSAQISHALALSLQHSDNSGFASHRSLIGGNITQGFYPADYAAAPYPLVHLLPPSEQKTFESSANSSGDGGGCLGGGGDGGGGDLTSSQTSETPSPIVDHHHHQESSSSSSMQPQPTQSAPTLLQQNGSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00868979;
- 90% Identity
- iTF_00868979;
- 80% Identity
- iTF_00264409;