Cfel020533.1
Basic Information
- Insect
- Camponotus fellah
- Gene Symbol
- retn
- Assembly
- GCA_030586385.1
- Location
- JAPIVC010000428.1:611781-618658[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-20 1.5e-16 62.0 0.0 14 89 4 77 1 77 0.93 2 2 2.1 9.7e+03 -1.5 0.0 3 21 171 189 162 201 0.75
Sequence Information
- Coding Sequence
- ATGTTCCCTAAGGAAGATCggACACCTATTAATCGTCTACCTATCATGGCAAAATCTGTACTGGATCTTTACGAGCTTTATAAGTTAGTGGTCACGCGAGGTGGTCTCGTCGAAGTGATCAACAAGAAGCTGTGGCAAGAGATCATTAAAGGTCTTCGGTTGCCGGCGAGCATCACTTCCGCCGCGTTTACTCTACGCACGCAGTATATGAAGTATCTGTACCCATACGAGCAACAGAAGGAGAATCTCTCGACTCAGGAGCAACTGCAGACAGCGATCGAAACGAATCGACGCGAGAGCCGCAGAGGCAATTACACTACTTACGCTACCAACAACGAAAGTATGGTCGCGCGAAGTCAACACAATCCTTTGCCGAATACATTGTCCCAATTGCCGTTGGGGCTGCCGCTCGCCATAGGCCAAATGGACATCGGGGCGCAATCGCCGTTTGTAAACGGACATCCGCAACATCATCCCCATAACCCGCAGCATTTACCGCCGAACCTATCATCCAATTTTACAGAATACATAAAGAGGTTTCAAGAACAAAAACCGACTACTAATAATTCGATAGGTCAACAGAGTGGTGGCACGCCGATATCGCCATCCACGACGGAGACATTTAATGCGCTTGAATTGTCCAGAAACATATGGCAGAtgtcatataataatacacataaaatgtattcagGAGTTCAACCATCCTATTCCTCTACGCCATCTGAGTCGCCATCAGTGCCGACAAATAGTCCGGAACAAGAGAAAGCCCTAGATCTTGCAAATTCTGCACATAGgtcAGACCCAGTATCTTCTCCAAGTGCTAGTAGATCAGTTAGTTCACCACCGTCCGGTAACATGAAAAGAAATCAAGATGCTACGGACCTCTCCCCTTCAACATCTACCAAAAGAGTATTTTCCGATGAGGAAAATTTATCTGAGAGTACGCCCAACAGTATGCGCGTTATGCAAACGGTCACAGTTCGAGataATGGACAAAGGGAACTGATGATTAGCGTGGAGCTCAATGGTGTAACATATGAAGGCGTCCTACCAGCTAAAAATGATGACGCCAGCAGTACATCATCGAACTCAAATACCATAAAGCGCTCACGAAACAGCGAATCGTGA
- Protein Sequence
- MFPKEDRTPINRLPIMAKSVLDLYELYKLVVTRGGLVEVINKKLWQEIIKGLRLPASITSAAFTLRTQYMKYLYPYEQQKENLSTQEQLQTAIETNRRESRRGNYTTYATNNESMVARSQHNPLPNTLSQLPLGLPLAIGQMDIGAQSPFVNGHPQHHPHNPQHLPPNLSSNFTEYIKRFQEQKPTTNNSIGQQSGGTPISPSTTETFNALELSRNIWQMSYNNTHKMYSGVQPSYSSTPSESPSVPTNSPEQEKALDLANSAHRSDPVSSPSASRSVSSPPSGNMKRNQDATDLSPSTSTKRVFSDEENLSESTPNSMRVMQTVTVRDNGQRELMISVELNGVTYEGVLPAKNDDASSTSSNSNTIKRSRNSES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -