Cson003964.1
Basic Information
- Insect
- Campoletis sonorensis
- Gene Symbol
- -
- Assembly
- GCA_013761285.1
- Location
- JACEOJ010000114.1:404524-412215[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.025 2.1 9.2 0.1 2 21 1039 1058 1038 1059 0.92 2 10 0.23 19 6.2 4.1 1 21 1067 1087 1067 1088 0.94 3 10 0.0017 0.14 12.9 0.9 2 23 1147 1168 1146 1168 0.96 4 10 0.011 0.89 10.3 2.2 3 22 1288 1307 1287 1307 0.96 5 10 2.1 1.7e+02 3.1 0.2 3 23 1325 1345 1323 1345 0.94 6 10 9.3 7.6e+02 1.1 0.1 1 11 1356 1366 1356 1372 0.84 7 10 0.0018 0.15 12.8 0.5 1 21 1422 1442 1422 1443 0.94 8 10 0.036 3 8.7 0.9 3 23 1516 1537 1514 1537 0.94 9 10 0.016 1.3 9.8 0.4 1 22 2066 2087 2066 2087 0.97 10 10 0.056 4.6 8.1 1.9 1 20 2497 2516 2497 2518 0.94
Sequence Information
- Coding Sequence
- ATGACAACAGCACAGAAAACATTGGATTTGCGTGGAGGTCCTTTAGAAAGAATCATGCGAAAGACTAAAAAAGACACGTCCAAGGTGGCTGAAAAGCTGGAAGATGAGATTTTACATGACTGCGATGTGGGGACGAACCGGGCGAGAGATTTGTTGAGGGTTTGCAGACCATTATCCGTATATTTGGTTCGTCTACCAGAATCTCTGGTGAACAAGAATGTTGAGGCAACAAAGAAGTTACCAGTGAAAAAGAAAAGAAACTTCTGGTGGAAAAATGGCAGAATTCATAAGAAGCGTTCAAAAAATCAAAAGTCTGAGAAAGAAGCAAGAACGAGTCTACAAACGCAAGAATCGGAGACTCCTGAGCATGAAAGTTGCTCAAGCAAATTGGTAACAGGTGATGGAACGAGCCTGGAAAGAACAGAATCACGAACCGGAGAACCTTTTCCTGCTGATGTCGAAGAAACTCTTGTAAAAAAAATTCAAGCTGAGAAGATTGCAGAGAGCGTCGAAGAACTTTCTTCACCTTTGGCTCATAAAATAAGTGATAGGGTGGACGCAGCACCTCTGAGTTTAGATTCATTTACAAATTCTGAAGAAACGGAACGTCCAGAGAAACGACAGTTCCCAATTAATGAATTAACCATTGAAGCAGAACACAGAACACTTGAGACAAAAGAGCATACGGACAACGGGATTTCATTGGCCGAAGAAAGTAATAATGAGAATAGAACAGTCTTGCAGCCACCGGAGGAAAATGAAAGTTGGCCAACTGCAAAAAACACTAGGAAGAGAAGAAACTCTTCACTGTCCGAAAAGAGTGGGTCGCAGCAAGTTTTGCAGCATTCTAAAAAGCCCAGGTGTTTGTTACCGACTTCAGACAGTTCTGCATCGCCGTTGGAAGAGCGACATGCGACGGTTGCCAAGGAAATCGCCATCACGAGCTCACAGCAGCCAGTTCTGCTTACAAACGTGAAAGCGTCTAAAACGACGTCGAAACCTCGAGTAATAGGCAAAAAAATTCATCCGATGCACGAAGTCGTAGTGGTTGTTAACAGGCTCGACAATTCGCGTAGCCCACTAGTCGAAAAATGGAAAAATAGAGTGGATCTTTCTCAGTTGGATGAAGTAACTCCAAATTTAAGAGAAACACTATCCATTTCTACTTCGTCGATTAATCAAATTGAAAAGGAAAATGAGAAGGAGTTTCAGCCCACGATCAATGGCAATGAATCAGCGGGAATTACTTCGTTACCCTCGGCTCCCGTGGACCCGCCTTCGTTCGACATTTACGGAAACAATGATATCGTTATGTGCGACAGTAACGAGGAAGGCTCCGAAGAAGACGATGACGAAATAATTGAATTTTTGGCGGCACGACGAAGAACGAAGTCTTCTAATAAAAAAGCCTGCTACGGAAACCAAACCGATCAAGAGATGGATAAACGACAGGAATTGTCACCTTCGAGCATCAAAACACCACCGCCAAATAGATCAGGTTCTAATGCGAACCGAACAAGAGGACGATCGCGGCAGAGGAAACAGAGCGGGTGTACTACAGACGATTCCAAGTCCGAAGTTTCTTTCCCTAGTGTCAGATCGAGAAGATTCCAATCGAAGACGCCTGCGTTGCCAAAAACGCGAAAAACTACCAGGCAAAGTTACCTAAAATATGATGATTCAAGTTCCGAAGAAAGTCGATCACCTCCGATAACTCGGAGTAGATCTCGGGCTCCAATTCACCACTTGTTTTACGATGACTCGACGAATTCCGATGACGTGTTCCATCAAAAACGTAAGCAGAAGAGGTGGCGCCGGATATCCTGCAGCGACAGTTCGGACGAAGCTGAAGAGCCCCACGAAGAAATCAATGAAAACGAGAGTCGAGCTCCAGTCGGTAATGCAGAAAACATCTGCAGCGTTGTTGAGAGTGAAAATACTGAAAAAAATGACGAGTTACGTGATTCCGCGGCTGTTAATGATCCTCACGATGATCCGGTGAATTCCAACGATGTGGTTCATCGAGATCGTAAGAAGAACTTCTGCCATCGAATGTCCTACATCGACAGTCCGGACGAAGCTGACGAAACAAGTCAAGCCGTGGTCTGTAACAGAGAAAACGTACACGCTGCTATTCGGAGTGATGAAAATAACGAAAAAAATGTCGACTACATCGACGTGATGAATTCCAACGACGTGTTGGCTGAAAAGAATAAGCAGAAAATCAGGCATCGAAGATCCTTCAGCCACAGTTTCGTCGAAGTTGATCAAATTAACGAGGAAATCAATGATAACGAGAGTCAAGCCGTAGTCGATGATTCAGAAAATCTCGACAATGATGTTGAGAGTGAAGAAACTGAAGACCCACTCAATTCCGCAGCTACTACCGATTCTAACTTGACTTTGATGGATAACCTGCAATTCAAGCGTGATAATGATATTGAGAATTGTATGGCAAGAAAAAAATTAGCAACCATGAAAGACGCCATGGTGGTATTAACCCGGCTGGAAGATTTGAATAACCAATGTTCTGATGGTGGAATCGGATTTGGAGGAACGAGTGATTTCGATTTTTCGAGTCATTTTGGTCTGGAGAATAGTTCGGTGAATCAATCTTCGACTCTTGGAGAGTTCTCGGATAAGAATCTTTTGCAATCTGCTTCGGAAAGTCAGAATCGGGAAGGAGACGGCATCAATCGTCGAAGTAAGCAAATCAACCAAGATCATAAGCGTGCAAGAGATTCCGAAGAAAATGTCAAATTGGGACGCGGTACAACCTCGACCAGGAATGATGGAGAAGGTGACGAGTTGTCCGAATCAGACGACGAAGGGCAATTGACGGTCGATGAGTCGATACCTACCGAACTAGCGGAAACGGATGGCGAGCTAAGGTTGATTGTTGATGAGCGTCATAAAACAACAACGGATCCAATGATACCATCCCCGACTGATGGGGTTTTGACCGGTACAGTCAGTAGTAATTCCAAAGCAAAGAGTAGTCCAGCACCGAAAACCCCGTCGAAAGAGCTCGTAGAGGCTAGCAAGCTTCGAAACTGTACGAAACAGCAGGCTGAAAAGGGAAACCACAAATGCCAAAATATTTCACCCAGCACGAGGTGCGTAACGTGCGACAGATCGTTTAAAAGCATTGCGGCGTTGGAGGAACACACTTTGTCAAGTGCATTTTGTAGTTCTGGTTTTCAGTGCAATTTTTGCAGTTGTATTTTCAAGACATTGATCGAATTATCGAAGCATCATTCTCGTTGTATTGAAAAGAGAGCGAAAAGACTCGAAAAGACTGCTGCGCACGAATGCCAAACTTCTGCAGTTAAGGATTCTGAAGCGTCGCGTTCCAAAGGAAAGAAACAGAAGCCGGTGATTACGAAAAATCCCCCTAAGAAAATCCGCAAAGGACCTCGCTGTCGATCGGATAATCTTAGCTGCAACGTGTGCTCAACAACCTTTGATACCAAAACGGATCTCTCGGAACATTTGTACAAACACAGCTCGGAAGAACTTCAAGAAGCATTTAGAGCTGCCAAAGCCGAAGCAATGGCGAAGAGCCAGGCAGAGCAGGCTGCGAAACTGAAGGGAGTAGCCTCGAACATGAGTAATGTCGAGAATGCGCACAATCAAGTGAGTAACGATACAACAATCACTTCCACCAACGACAACTATTTTATTCAAAATGTTGGTGCTCTCGAGACAGAGGCAATAGTTTCCAATGTCAACGCAATTGCGTCGAATACCTTGAACAATGATTTGTCAACGTCAAGGCCGGCAAACGTTTGTTTGTGTCATAGAGATCTAGATCGAACATCCGTGGACAAGACCGACCTTCAAATAGAAATGGTTTTACTTTGTAAATACTGTCATGTTATATTTAGACGTCGCGAGTGCCTTGAGGTTCATTATCGAATGAGCAGTATCTGCTCTGTTAATCGAACGAGAGAACGATGTCCAAGTTTATTTTGTGCCAATTGTCAGTCAACTCTCAATAGCTGGGCAGATATGCGGCAGCATTTGGAGCTACACGCGCATCAAAATTCCGAAAGGACCATTAGATTCGTCTGCAATATCTGTCGAGTTGTATTTGTTGGATTTGGCGCATTATTCTACAATCATTGGACCAGTCACTCCAAAGATACAATGTTCGTAGCAGGACGTTACAATTTTCCCAAATTTTCGGTTCAGCCAATAAATGGAACTGAAAAATTACCTGCTGGCGCGAGATCCGATGAGGATTATATTTTTGTCGCTGAGCATGTATGTGCCACTTGTAGAGAACCCTTCTCAACGCGACGTGATCTCGAGAAACATCAACAAAGCGCATCTTGTAGTAAACAGATATCGACCCAGTCGAAAAATGCCGCAAATAACAGGCAAAACGAACGCCCCAAGAAGGCACATCCGACCGTTGGAGTAAACGTGAGTCACGCTACGACACCCAAACGGATAGCAATCAGCCCAAGAAACAACTCCAAACCGCTTTCTCCAACTGTGAGTGCTGGGCAGCAACATAACCTCATTAAAACGAGAATGTTCTGTGACGTGTGTAACCTGGCGTTCATCAATGAACATTGGTTGACCACTCACAGTAAGAACATGCATGAGAACCATTTCACTTTTGTCCCGACGACTTTGTCAGGTACACCACTCGCGCTGCCATTCAAATGCAACAAGTGTTCCGCCTTCGCGGGGTCAGTGAGCGCGATCGAAGAACATTGGCGGACTGATGTGCTACATCAGGGCCCCGCGGCATTGTTGAAAATGAAGAAAACCCCTCAACCGTCAAAACCTGAGGTTGTAACGTCGTCGAGGGACCAGGGTAAAAATGTACAAGAAAACCCATCATCGAATGCTTCCATGATCAATGTGAATGACGTAACATCGACTGACAAGAGTAAAGATTTGAAGAAACCGCCGATAATTACGATAGATGATCCTGAGAGCAACAGCGATTCTCGTGCTTCCGAAGATACTCCGACGAATCAAAATACTACCACTCGCAATGGGGAATCAGTCATTTCAGTGCCATCTATTACGAGTACAGAATCTATCCAAGTTCCAAGCATCAACGAAGCCCCAGTGCTTCCTGATGTTCCAAATAATCCTTCGTTATTTGCGAGCAATTCCAATGAAAAACAAAGAGCAAAAAAACGGGCTCTAGAAGATCCTAGTGTAGACGTAAGGCTCTCGGAAACATCTGGTACTAAATTGTCTGCCTCGTTAGTTATCGGTGATACCGTGGAGAAAAGAAAGGACAATACAGTCAACGATTTAGCGGCGGATCCTGGGACGAAATCTGCTGAAAAAGATAAAGTAGCACAAGCAGAGGGCTCTCATTTAACTGCGGCCGCTGTCTCGGACGTAGCAGCTACGCTGTTACTATTGGCTGGAACCCCCATCGGAGACAAAGATACAGTAGCACAAACAAAAGGCTCTAATCCAACAGTGCCCGTTGAATCGTGCGGAGATCCTACGCAAGTACCATCGACTGGATCAACCGTTGCTGGAAACAATGAAATAGTGCAAACAAAGACCTCTGAATCAATCGTGCCCAGTGAATCGGACAAGGAGGCTACGCTGCAACCATCGACTGAATTAACCGTTGAAAAAAATAATGAAGTAGCACCAACAGAGGGCACTGATTTAAAATCGAATGATGAACCTACGAACGTACCGACGCCTAAAAAACCAGCAAATACCGCTATCGTTCCGGAAGTTATCGACATATTTGACGAGGCAGAAGATTGTGAAAATGAGCAGCCAACAGGGCAAGCGATATTGGACCCACAGAGTCGTAACAATTTGTTTATTGATGCGCATGAAACTGTCAATAGTTTGCTGGAAAGTGCAAAATCTAATGTCGTTGAAATGCGCACGGATGCCACACCGATTAAAATCGATACTCCGAAAAGTCTTCCCGTCGATGCACAAAAAACGTCTGGAAGTTGTTCAGGTACAGAAAGTAGCTCAAATCCGACGGGCGCTAAGTCCGGATCACCTGGTCGATCAAAAATGATGAAAGCAGCATTAAAATTATCTAGCATATCGTTTGAAGAAGACAGATGGAATTGGTTGCGTTCATCATCAGCGAACCGTGACGTCGCCAACTCGATGGCACCGTTGATACCAAAAAAACAAGGATTCCTTCGGGTTAAAGATTTATCAGAGTTACAGGCAGTAAGAAATTACACGTGCGATGATTGCAAGAGCACTTTCGAATCAGAAAAATCATTGGGTGAACATCGCCGGACGGCAACGTGTGGTGGTTCTACCCAAGGCAGGAATGTTCAATACCCTCGTGGTATATCAGCAGCTCTTGTCCTGCCGGATCCATCAGAACGGCCGAAAACTCCTGAAGCAAACCTGCCACCGCCGCTGGCTCCCTTGTCCAACGATACGACATCGTCACTAAGACGCGCCCTCTCATCGCAGCAACCTTCTTGTCCTCAGCAAGTGATCTCCAATGCTGCTACGGCCCAAACGATCCAAGCAGCCAATTATCTACCGAATATGCCTGTAAATAATACAACCCCGCCATCATGGACATCAATTGGAAATACCTCCGTGTTGGGTAACAGTCCTAATCAGTTCCTGGATCCTCAACTGTTTCAACAACACCAGTCTACCTTATCCGGTGGTTCGATGTTAATGCAGAACTTGAATCAGGGGCTTCCTGAAATACGGACTTCGACCTTAGGCTATCATACTTTACCTCTAGCAGTCGGTTTGCCATCAGTGCAGACAAACTCGCATCAACCGATGGCAACACCGCATCCTATCTCTTCCAATAATCCTCTTCCTAAGTTCACGGGTCGACATGCTCCGATAGTAATCCAACAACCGGACAAAACGAATAAATATCTGTGCACAATATGCCACACATTTGAATGCTCCAGCCTGGACGCCATCAGAGATCACCTAAAAAAACATTATAACGGCTGGAAGAACTCGACATCAACGCAAGATTCGAGGCAACCATCGCCGGTTGCCTCGAAGGTTCCTGCCCCATCACCCGACACTTATCCATTATCATCGTTGGAGATGACGGCAAACAATAGACAGATTTCATCGAAAAACGTGCCAGTAGCGATAGATTCAGCTGCCAACCGTCCGCTTCTCGGCAACTGGACCATCAAAAATACACCCCAAGGTCCCGTCTTGGTCACCCCCGTTTCAACCGAATCGAACAACAATCGGGCGGTTCTTCGTCAAGCTTCATTCAACTCAAACAATCTCTCCTCCAACGCCCTCTACAGTAGTCAACTCGTATTCCGTTGTAGAATATGTAAATCCGCAGTGTACAAAAGTTATCCACCGTTGCGCAATCATGCCATCCTCGTGCATGGTATTACCGATTACAATTTACTCGCTCAGCGAAATATCGCCCAAAATGCTTATCTTTGTACCCAGTGTCCTAACACTTCGGCTCTTTTTGATTCTGAAGAAGAATTTCGTGAGCACGTTGACAATATTCATACACACTCTTGTCCATCCTGTCGACGAGTTTTCTCCAATTTCCTCACGCTCAGGCATCACCTGGAGCAATGTCGTGTATCCACGTCCAGCAACCGTAATACTTATGGCAATAATTGTTGA
- Protein Sequence
- MTTAQKTLDLRGGPLERIMRKTKKDTSKVAEKLEDEILHDCDVGTNRARDLLRVCRPLSVYLVRLPESLVNKNVEATKKLPVKKKRNFWWKNGRIHKKRSKNQKSEKEARTSLQTQESETPEHESCSSKLVTGDGTSLERTESRTGEPFPADVEETLVKKIQAEKIAESVEELSSPLAHKISDRVDAAPLSLDSFTNSEETERPEKRQFPINELTIEAEHRTLETKEHTDNGISLAEESNNENRTVLQPPEENESWPTAKNTRKRRNSSLSEKSGSQQVLQHSKKPRCLLPTSDSSASPLEERHATVAKEIAITSSQQPVLLTNVKASKTTSKPRVIGKKIHPMHEVVVVVNRLDNSRSPLVEKWKNRVDLSQLDEVTPNLRETLSISTSSINQIEKENEKEFQPTINGNESAGITSLPSAPVDPPSFDIYGNNDIVMCDSNEEGSEEDDDEIIEFLAARRRTKSSNKKACYGNQTDQEMDKRQELSPSSIKTPPPNRSGSNANRTRGRSRQRKQSGCTTDDSKSEVSFPSVRSRRFQSKTPALPKTRKTTRQSYLKYDDSSSEESRSPPITRSRSRAPIHHLFYDDSTNSDDVFHQKRKQKRWRRISCSDSSDEAEEPHEEINENESRAPVGNAENICSVVESENTEKNDELRDSAAVNDPHDDPVNSNDVVHRDRKKNFCHRMSYIDSPDEADETSQAVVCNRENVHAAIRSDENNEKNVDYIDVMNSNDVLAEKNKQKIRHRRSFSHSFVEVDQINEEINDNESQAVVDDSENLDNDVESEETEDPLNSAATTDSNLTLMDNLQFKRDNDIENCMARKKLATMKDAMVVLTRLEDLNNQCSDGGIGFGGTSDFDFSSHFGLENSSVNQSSTLGEFSDKNLLQSASESQNREGDGINRRSKQINQDHKRARDSEENVKLGRGTTSTRNDGEGDELSESDDEGQLTVDESIPTELAETDGELRLIVDERHKTTTDPMIPSPTDGVLTGTVSSNSKAKSSPAPKTPSKELVEASKLRNCTKQQAEKGNHKCQNISPSTRCVTCDRSFKSIAALEEHTLSSAFCSSGFQCNFCSCIFKTLIELSKHHSRCIEKRAKRLEKTAAHECQTSAVKDSEASRSKGKKQKPVITKNPPKKIRKGPRCRSDNLSCNVCSTTFDTKTDLSEHLYKHSSEELQEAFRAAKAEAMAKSQAEQAAKLKGVASNMSNVENAHNQVSNDTTITSTNDNYFIQNVGALETEAIVSNVNAIASNTLNNDLSTSRPANVCLCHRDLDRTSVDKTDLQIEMVLLCKYCHVIFRRRECLEVHYRMSSICSVNRTRERCPSLFCANCQSTLNSWADMRQHLELHAHQNSERTIRFVCNICRVVFVGFGALFYNHWTSHSKDTMFVAGRYNFPKFSVQPINGTEKLPAGARSDEDYIFVAEHVCATCREPFSTRRDLEKHQQSASCSKQISTQSKNAANNRQNERPKKAHPTVGVNVSHATTPKRIAISPRNNSKPLSPTVSAGQQHNLIKTRMFCDVCNLAFINEHWLTTHSKNMHENHFTFVPTTLSGTPLALPFKCNKCSAFAGSVSAIEEHWRTDVLHQGPAALLKMKKTPQPSKPEVVTSSRDQGKNVQENPSSNASMINVNDVTSTDKSKDLKKPPIITIDDPESNSDSRASEDTPTNQNTTTRNGESVISVPSITSTESIQVPSINEAPVLPDVPNNPSLFASNSNEKQRAKKRALEDPSVDVRLSETSGTKLSASLVIGDTVEKRKDNTVNDLAADPGTKSAEKDKVAQAEGSHLTAAAVSDVAATLLLLAGTPIGDKDTVAQTKGSNPTVPVESCGDPTQVPSTGSTVAGNNEIVQTKTSESIVPSESDKEATLQPSTELTVEKNNEVAPTEGTDLKSNDEPTNVPTPKKPANTAIVPEVIDIFDEAEDCENEQPTGQAILDPQSRNNLFIDAHETVNSLLESAKSNVVEMRTDATPIKIDTPKSLPVDAQKTSGSCSGTESSSNPTGAKSGSPGRSKMMKAALKLSSISFEEDRWNWLRSSSANRDVANSMAPLIPKKQGFLRVKDLSELQAVRNYTCDDCKSTFESEKSLGEHRRTATCGGSTQGRNVQYPRGISAALVLPDPSERPKTPEANLPPPLAPLSNDTTSSLRRALSSQQPSCPQQVISNAATAQTIQAANYLPNMPVNNTTPPSWTSIGNTSVLGNSPNQFLDPQLFQQHQSTLSGGSMLMQNLNQGLPEIRTSTLGYHTLPLAVGLPSVQTNSHQPMATPHPISSNNPLPKFTGRHAPIVIQQPDKTNKYLCTICHTFECSSLDAIRDHLKKHYNGWKNSTSTQDSRQPSPVASKVPAPSPDTYPLSSLEMTANNRQISSKNVPVAIDSAANRPLLGNWTIKNTPQGPVLVTPVSTESNNNRAVLRQASFNSNNLSSNALYSSQLVFRCRICKSAVYKSYPPLRNHAILVHGITDYNLLAQRNIAQNAYLCTQCPNTSALFDSEEEFREHVDNIHTHSCPSCRRVFSNFLTLRHHLEQCRVSTSSNRNTYGNNC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -