Basic Information

Insect: Campoletis sonorensis
Gene Symbol: Bcl11b
Assembly: GCA_013761285.1
Location: JACEOJ010000101.1:1222544-1234957[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.1 8.3 7.3 0.2 2 23 194 216 193 216 0.94

2 6 3.2e-07 2.6e-05 24.6 1.6 1 23 523 545 523 545 0.99

3 6 0.0015 0.12 13.1 0.3 2 23 566 588 565 588 0.97

4 6 7.3e-07 6e-05 23.5 3.2 2 23 793 814 792 814 0.97

5 6 2.4e-05 0.0019 18.7 2.5 1 23 820 842 820 842 0.99

6 6 4.3e-05 0.0035 17.9 0.4 1 22 850 871 850 871 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.1	8.3	7.3	0.2	2	23	194	216	193	216	0.94
2	6	3.2e-07	2.6e-05	24.6	1.6	1	23	523	545	523	545	0.99
3	6	0.0015	0.12	13.1	0.3	2	23	566	588	565	588	0.97
4	6	7.3e-07	6e-05	23.5	3.2	2	23	793	814	792	814	0.97
5	6	2.4e-05	0.0019	18.7	2.5	1	23	820	842	820	842	0.99
6	6	4.3e-05	0.0035	17.9	0.4	1	22	850	871	850	871	0.97

Sequence Information

Coding Sequence: ATGACGACGAAGAAAAAGGGAAACGCAGTGGTGAGAAAAAGAGGCGGCCATTATTGTCCGAAATTGTTGAGCCCCATCGAGCAGGATCTTTCGGACTTGATAGTCTCAACTTCCGCGGAAACGTCGCAAGGTCCAGCGTCACCAGACACCGTCCAATGCGGGGGTTGCCGAGCCTCCTACCCTCTCGGTGAAATAGTTCGCTTCATCGAGCACAAAGTAAACCATTGTCGTAGCAGTCTTCAAGGTTGTCACAGTCCACCACCGGCTGCTGCCCACGAGGATTCCGATCCTGAGGATGCCCTTGCCCTTAAAACTTCGGACACGGAAAAGCTCAACTCGGTACCGAGTATTTCGGCACCCATAAACAAACGTTCGAGCAGAGTTGAAAGTCCACCAACCCCACAAGGCAATAACGCCGATACCGGAAGTCCGATCGAGCTCAGAGCGAGTGCGAGCTCGACGCCGAAAAGACGAACCGAAGGGACTGAGGAAACGGAAAAGGAGGACATTCCAAAAAAATTGAAAACCGAGTCTGTCGATGCGGACACAAATACCGTCAGTTCCGAGCCACGATGTCTGCAATGTTCTCAATGTTCCCGCCGTTTGACCTCGGCTTGGGAAATGCTACAGCACGCACAGAGTGTTCACGGCGCGAGACTCTATTCGTCATTGTCTTCATCGATAAATTCCTCGTCAAACACACCTGCTCCGAGTCCTCCGACGTCTACGCCGATCCACACCCAACAACAGCAGCAACAGCAACAGCAGCAACATCATCTTAGCCCACCAAATCATTTGAATCTCAGTGGTAAATCGAGTGGAAGTTCATCAGCGGCAAACACGTCTGGTGGTGGTACGAACACAAGTGGTGGAAGCAGCAGTAGTCGTCAACAGTTGCAATCGTCGGCGGCGTCATTGGTCGGTGACCCGTTGCACAGTTTCATCAGACTTCCTCAGCATCTGGAGAGGAGCTTTCCGCCGATATTCAGGCCCGATTTTCTGGCACTAAACCCACTCGCTGGATACCGAGGCCTCCAGGACCTCCAAACAGCCACAAGGAATCTTCAAAACCTCGGCGATCCTTTGCGCGGTATGGATGGTCTGAACTTGGGCGATTCCCTCGTCAGAAGCAGCCTCGATACCCTCAACAACGCGAGGAATCTGGCAAATTTAACGGAACTGTCACACGCCCGAGTGCTACCGGGACAAGGACATCAGCCACAATTAGAAGCGAACCTGGATTTTTATTCGGCGCGCCTAAGGAGCCTCGCTAACCCGTCCTTAGGCGCGGCTCCACCTAATCCCCCCACCAATCAAAGTCCACTAGTTCCCAGTCAAATTCAACAGCAGCAACAATCGAATCATCATCCCGTATCATCACCCAGTCCAGCTGCCACTAATCTAGCGAGTCTTCATCTAGCTAGTCATCAAAAGGAAAACTCACCACCTTCTTACACCCAGAGTCCAACCGGTCATCACAACAACAACAACTCGACCGACAGCGAGAAAGCCAGTCCATTAACAACCGGTTCAACTCCAGTGATCACGGATTCTGCTGAAACGGTTTACACGTGTGAGATCTGCGAGAAAAAATTCAGGTTCCAATCGAATCTCATTGTGCATCGGCGTAGTCATCAGGAAAAAGAACAACGGCGTTACAAAGAAGAGAGTGCCCAGGAGTCTGGCACATCTACGAGATGCGAAATTTGTGACGTCGAGATAGCCAGCTTCACGGAATTAAGGAAACACATGAGGAAGGAACATCAAGAGACGTTGACAGCTGCTGCCAGTCCTCAAGGAAGCGTCGAAACGGTTCCGGACGATGGTTCGAGCTGTGACGAGAACATGGATCTGGACGAAGCGGAAGAGAACGAGCATGAGAAGCGCGGTGACGACGATGATCCTGAGGAAAATACACCGGAGGATCTCAGCACGACGCAGGGCCAGAGTAGCGAAGAGAGCGGGGGCAGAGTTGACCAGAAACCAAGTTTGGTTGGTGATTTGATGGAAAAATTCGGCCTGAGCAATATCGCCCAGTATTCCGAGGCTTATCGGCAGGCCCTGCAAGAGAATCATCGAGGAAGTTTTCTCAAAACCGAATCACCTTCCAATCTGACAAATAGTCTTAATAACAACAAGGAAAAGGACAGTGCTCTGTCACCCACGAACTTCAATTCGTCAACAACTGCAAATATATTTTCTGGTCAGGGTTTTCCTAGGACCGCTGGTCCGGACTTTGGTGGACTTTGGTTGCCGAATCCGCACTATCTAGAGAACAACGAGTTCCGCAAAGTCTCCAAAGCTACTACTTCCAGTTTAGCTCTTCCGGGATTGCCGAGTCCTTTGTTGAAGAAGGAACGCAACGGTCGTAATGACACTTGCGAATTTTGTGGCAAGGTCTTTAAGAATTGCTCGAACCTGACGGTTCACAGGCGATCACACACCGGCGAGAAACCCTACAAGTGCGAGCTCTGCGCTTATGCGTGTGCTCAAAGCTCCAAGCTCACGAGACACATGAAGACACACGGCAGACAAGGTAAAGACACGTACAAGTGTCGATTCTGTGAAATGCCATTCTCCGTGCCCAGCACACTCGAGAAACACATGAGAAAGTGCGTGGTCGTTCAGCAAGGGCCTAAAATGGGAATACCTTATCCGGGTAGTCAGGACGAAGATTCTTCCTTGAGTACCAAGGACACTTGA
Protein Sequence: MTTKKKGNAVVRKRGGHYCPKLLSPIEQDLSDLIVSTSAETSQGPASPDTVQCGGCRASYPLGEIVRFIEHKVNHCRSSLQGCHSPPPAAAHEDSDPEDALALKTSDTEKLNSVPSISAPINKRSSRVESPPTPQGNNADTGSPIELRASASSTPKRRTEGTEETEKEDIPKKLKTESVDADTNTVSSEPRCLQCSQCSRRLTSAWEMLQHAQSVHGARLYSSLSSSINSSSNTPAPSPPTSTPIHTQQQQQQQQQQHHLSPPNHLNLSGKSSGSSSAANTSGGGTNTSGGSSSSRQQLQSSAASLVGDPLHSFIRLPQHLERSFPPIFRPDFLALNPLAGYRGLQDLQTATRNLQNLGDPLRGMDGLNLGDSLVRSSLDTLNNARNLANLTELSHARVLPGQGHQPQLEANLDFYSARLRSLANPSLGAAPPNPPTNQSPLVPSQIQQQQQSNHHPVSSPSPAATNLASLHLASHQKENSPPSYTQSPTGHHNNNNSTDSEKASPLTTGSTPVITDSAETVYTCEICEKKFRFQSNLIVHRRSHQEKEQRRYKEESAQESGTSTRCEICDVEIASFTELRKHMRKEHQETLTAAASPQGSVETVPDDGSSCDENMDLDEAEENEHEKRGDDDDPEENTPEDLSTTQGQSSEESGGRVDQKPSLVGDLMEKFGLSNIAQYSEAYRQALQENHRGSFLKTESPSNLTNSLNNNKEKDSALSPTNFNSSTTANIFSGQGFPRTAGPDFGGLWLPNPHYLENNEFRKVSKATTSSLALPGLPSPLLKKERNGRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCAYACAQSSKLTRHMKTHGRQGKDTYKCRFCEMPFSVPSTLEKHMRKCVVVQQGPKMGIPYPGSQDEDSSLSTKDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01454407;
90% Identity: iTF_00798821;
80% Identity: -