Basic Information

Insect: Campoletis sonorensis
Gene Symbol: zfh1
Assembly: GCA_013761285.1
Location: JACEOJ010000144.1:1463551-1469232[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.036 2.9 8.7 1.1 2 23 76 98 76 98 0.92

2 7 1e-05 0.00082 19.9 0.6 2 23 118 139 117 139 0.97

3 7 6.2e-06 0.00051 20.5 7.8 1 23 148 170 148 170 0.99

4 7 0.00019 0.015 15.9 2.6 1 21 176 196 176 197 0.95

5 7 9.7e-05 0.0079 16.8 4.2 1 23 652 674 652 674 0.94

6 7 2.4e-05 0.002 18.7 7.3 1 23 680 702 680 702 0.98

7 7 0.0017 0.14 12.9 4.3 1 21 708 728 708 729 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.036	2.9	8.7	1.1	2	23	76	98	76	98	0.92
2	7	1e-05	0.00082	19.9	0.6	2	23	118	139	117	139	0.97
3	7	6.2e-06	0.00051	20.5	7.8	1	23	148	170	148	170	0.99
4	7	0.00019	0.015	15.9	2.6	1	21	176	196	176	197	0.95
5	7	9.7e-05	0.0079	16.8	4.2	1	23	652	674	652	674	0.94
6	7	2.4e-05	0.002	18.7	7.3	1	23	680	702	680	702	0.98
7	7	0.0017	0.14	12.9	4.3	1	21	708	728	708	729	0.96

Sequence Information

Coding Sequence: ATGGGTTCCGAAAAGTTATCCGGTGACGGGACGTGCACGCGCGAGGACGAAGCCGGCGCTGAGCTTGCTGAGGTTGCCGATTGTGCTGGTGGGGCGGCGGCTCAAGGTGGTGGTGGTGGGGGTGGAGGAGGAGGAGGAGGTGGTAGCGAAGGCGTTGGAGGAGGCGCCGGTGTCGCCAGTAGTGGCGGCACAGGAGGCGAGTCCGGCTCGGCAAAGCAAGGCGAGAGATGCCCGCAGTGTGGCATGATCTGTAGAAATTTACACGTTCTTCAGCTTCATCTCGAAGACATCCATAAAACTTCATTCGCCAACATCGACAAACACGATCTCAGCGCTCAATTCTCTCAAGTTTCGTGCAAAGTGTGCAACAAAACATTCGCAAACGTCTATCGTCTTCAAAGGCACATGATCAGCCACGACGAAAGCGCAGTTTTGCGTAAATTCAAATGTCCACACTGTGAGAAGGCCTTCAAATTTAAGCATCATCTGAAGGAACATCTCCGAATCCACAGCGGTGAAAAGCCATTCCAATGCAACAATTGCAGCAAACGTTTTTCTCATTCGGGCTCATACTCGAGTCACATGACATCGAAAAAATGTTTGATAGTAAATTTGAAAAAAACACGTCAGACCTCGATAGCGAATGTCGATCGCGTCGCAAAAAAGTCACAACAGAATCTGTCCAACTCGCGGCGAGATCCTGTCGATCTTCACGTCTCAAACAACAATACTTTCATGCCGATATTGCCGAAATTGTCGCCTTCGGATTATCGGGATATACAACGAGAAGGAGCAGGTATCTACGATATGCCTACACTGTTACCTCAAATGATGGGCTTCGGTAGTTATTTTTTGCAATCATCAATCGGAAAAATTCTAAACCAATTGCACACGAAGAGATTGGACGAGGTTGCAGAACAATTCGAAACTCATCGCGAAGTAATGAGTCCTTCGACCGCTGATTCCGAAGGAACTGAAGGTACCGAAGGCAAAAATTCACCATCACCAAGTGATCCTCAAGGGCTCGATGCTGTCAGACGAATTCTAGAGACCGTCAATACCTCAGTTACGAAACAATTGCTCGAGGCGAATGTGAGGAAATTAGCCTCGTCTCCTGCGACCATTAAGCGAGAATACGACGAAGATTACCAGGATCAGGACAGTGAAATGTCAAGCGAAATGACACACAGTCAAGATTGGCAAACGGCTGATCAATGTGATTCGCAGAGCGAAGGTCTCGCGGCAAAACTGGAAGACGTTAATCGACCGTCGCTGGACCGTCAGAGTTACAAGAGAAAAGCAGAAGACAACGGTGTCGAAAGTTCTGAGGGCGATACGGACGATGAAGAGAGTACACAGCCGCAAAACGAATCGGGCAGAAGAGTCAGAGCACGCTCGTTGATCGATGACGAACAATTGGCCGTCCTTAAGGGTTATTACGCGATAAATCCACGACCTAAGAAAGAGGAAATCGCCATGATAGCGAATTACATTAATTTTCCAACCCGAGTTGTTCAGGTTTGGTTTCAAAATTCACGAGCAAGAGATCGCAGAGAATCGAAAATTCCGGCACTTTTGCCGCTGGCGAACCTCAGCAATCACAATAATATTGAGCAACCGCTTGATCTTTCGAAAAAAGAAGCTTACACGATATCTGTCGTGAAGGACAGCGATGGCGGATCGAGCAGACACACCGCATCTCCCTGTGGCCCTAAAGAAGAACAAATACGTCCTGTTTCTCAACCTCACAACGAAGTCGAAGACGTCGATGATTCGCCACTTGTTATCGACGAGGAAACGACAGACTGCAGCGAACCCAAGAAAGTAGAGGTCATTATCAATGAGGAAATCGTCCCTAAGAGTCAACCAGTAGTTGTAACGAAAACCGCCGAGCCTGTAATCAACACAACGACGGAAGCACCACCACCAGTCGAGAACGAACAAGAAGGTTTATACTTTTGCGATCAGTGTGACAAAACATTCTCAAAACACAGTTCACTCGCCAGACACAAGTACGAACATTCCGGTCAAAGGCCTTACAAATGCGAGGAATGTCCTCGTGCTTTCAAGCACAAGCATCATCTAACGGAACACAAGAGACTTCATACCGGTGAAAAACCTTTCCAGTGTTCCAAGTGCCTGAAGCGATTTTCTCATTCGGGTTCCTACAGTCAGCACATGAACCATCGTTACTCCTATTGCAAGCCGTACAGAGAATAG
Protein Sequence: MGSEKLSGDGTCTREDEAGAELAEVADCAGGAAAQGGGGGGGGGGGGGSEGVGGGAGVASSGGTGGESGSAKQGERCPQCGMICRNLHVLQLHLEDIHKTSFANIDKHDLSAQFSQVSCKVCNKTFANVYRLQRHMISHDESAVLRKFKCPHCEKAFKFKHHLKEHLRIHSGEKPFQCNNCSKRFSHSGSYSSHMTSKKCLIVNLKKTRQTSIANVDRVAKKSQQNLSNSRRDPVDLHVSNNNTFMPILPKLSPSDYRDIQREGAGIYDMPTLLPQMMGFGSYFLQSSIGKILNQLHTKRLDEVAEQFETHREVMSPSTADSEGTEGTEGKNSPSPSDPQGLDAVRRILETVNTSVTKQLLEANVRKLASSPATIKREYDEDYQDQDSEMSSEMTHSQDWQTADQCDSQSEGLAAKLEDVNRPSLDRQSYKRKAEDNGVESSEGDTDDEESTQPQNESGRRVRARSLIDDEQLAVLKGYYAINPRPKKEEIAMIANYINFPTRVVQVWFQNSRARDRRESKIPALLPLANLSNHNNIEQPLDLSKKEAYTISVVKDSDGGSSRHTASPCGPKEEQIRPVSQPHNEVEDVDDSPLVIDEETTDCSEPKKVEVIINEEIVPKSQPVVVTKTAEPVINTTTEAPPPVENEQEGLYFCDQCDKTFSKHSSLARHKYEHSGQRPYKCEECPRAFKHKHHLTEHKRLHTGEKPFQCSKCLKRFSHSGSYSQHMNHRYSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00266735;
90% Identity: iTF_00266735;
80% Identity: iTF_00263320;