Basic Information

Insect: Campoletis sonorensis
Gene Symbol: -
Assembly: GCA_013761285.1
Location: JACEOJ010000069.1:1805072-1810536[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00031 0.025 15.2 0.1 2 23 867 888 866 888 0.97

2 17 5.5 4.5e+02 1.8 0.2 3 19 896 912 894 914 0.88

3 17 1.9 1.5e+02 3.3 1.2 2 23 921 942 920 942 0.96

4 17 0.0007 0.057 14.1 1.9 2 23 950 972 949 972 0.96

5 17 0.0016 0.13 13.0 3.2 1 23 979 1002 979 1002 0.98

6 17 0.00069 0.056 14.1 2.1 3 23 1010 1031 1009 1032 0.96

7 17 3.4 2.8e+02 2.5 1.6 2 23 1039 1059 1039 1059 0.91

8 17 1.6e-07 1.3e-05 25.5 2.1 2 23 1065 1086 1064 1086 0.97

9 17 2.6e-06 0.00022 21.7 0.2 1 23 1092 1114 1092 1114 0.99

10 17 0.0051 0.42 11.4 2.8 2 23 1126 1148 1125 1148 0.95

11 17 0.54 44 5.0 2.6 1 23 1154 1177 1154 1177 0.92

12 17 0.0035 0.29 11.9 2.0 2 23 1199 1221 1198 1221 0.95

13 17 0.001 0.081 13.6 0.8 2 23 1228 1250 1227 1250 0.96

14 17 4.8e-05 0.0039 17.8 1.7 2 23 1258 1279 1257 1279 0.97

15 17 0.0014 0.12 13.1 2.3 1 23 1285 1308 1285 1308 0.96

16 17 0.38 31 5.5 3.2 2 23 1315 1336 1314 1336 0.96

17 17 0.6 49 4.9 1.9 1 23 1342 1364 1342 1364 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00031	0.025	15.2	0.1	2	23	867	888	866	888	0.97
2	17	5.5	4.5e+02	1.8	0.2	3	19	896	912	894	914	0.88
3	17	1.9	1.5e+02	3.3	1.2	2	23	921	942	920	942	0.96
4	17	0.0007	0.057	14.1	1.9	2	23	950	972	949	972	0.96
5	17	0.0016	0.13	13.0	3.2	1	23	979	1002	979	1002	0.98
6	17	0.00069	0.056	14.1	2.1	3	23	1010	1031	1009	1032	0.96
7	17	3.4	2.8e+02	2.5	1.6	2	23	1039	1059	1039	1059	0.91
8	17	1.6e-07	1.3e-05	25.5	2.1	2	23	1065	1086	1064	1086	0.97
9	17	2.6e-06	0.00022	21.7	0.2	1	23	1092	1114	1092	1114	0.99
10	17	0.0051	0.42	11.4	2.8	2	23	1126	1148	1125	1148	0.95
11	17	0.54	44	5.0	2.6	1	23	1154	1177	1154	1177	0.92
12	17	0.0035	0.29	11.9	2.0	2	23	1199	1221	1198	1221	0.95
13	17	0.001	0.081	13.6	0.8	2	23	1228	1250	1227	1250	0.96
14	17	4.8e-05	0.0039	17.8	1.7	2	23	1258	1279	1257	1279	0.97
15	17	0.0014	0.12	13.1	2.3	1	23	1285	1308	1285	1308	0.96
16	17	0.38	31	5.5	3.2	2	23	1315	1336	1314	1336	0.96
17	17	0.6	49	4.9	1.9	1	23	1342	1364	1342	1364	0.95

Sequence Information

Coding Sequence: ATGAGCGAATCTATTAAAAACTCCTCGAATCTTAGTGTTAATGAAAACAACGATTCGGACAATTTTCACGAGAATTTACAACATGACGAGTCTAACCACGACGATCTCATACGAGATCTCACTTCTGAAAGTATCGTAACCCTGGATTCTGTTGTTTCTGGCAATGAACAAGTTCAAATCGTCGCTCTGCCTGAAATTCCAGCTCCAATTAATGTCGGCGGAGGAACTTCTGTGCAAAACAGTGGCAGCTCCAAAATGACAACGGATACCGCACCGAAACAAGACAAAACATGTCCGAGTCCGGTGTCAAAGCCGGACAAACAAGACCACGACTACGTTGAAACCCAACGGACGATAACTCCTGAAAGGTCACTAAAAATTTTTGACAAAAAAGCGTGTACGATAGTGAAAAGCAACAGTGCATTAGCGCTGAGAGCACCGAAGCGTAGAATGCAAGCGCCGATAGCTCAGGTGAAAAATATAAACGATTTGAAGAAAGTAACGCCGCGAGTGAAGCTTATATCGTCGGAGCCAACGACTTTAGCGCAATTAACAAATCCGTTGGGGGTGACAGACGGCAGAAGCTTTTTGAGCCAAGAGAGAGCGAGAGATCAATTGAGAAACTATTGCCGCACTTGCGCCGGCCAGAAATTACCTCTTGTAGATATATTCAGTGAGAAAGGAATGCAAATGCGGCTGAACCAGCAAATGAAACATTTAGAAGAGATAAAAGAGCAGGACAGTCTTTCCACGCAAATGTGCATGGATTGTATATGCGATTTGAAAATGAGTTACAAATTTTTCATGCAAATAAAAAAAGCTCAGGTGAAATTGCAATCGATAAGTTCTTCGCTGCAGGTCAATACGGCGAACGTTATTAAGACGAACAACGACGAGGACAAATCACGTCCGATAGCAACAATATCATTGACGGATAGTCCTGAGCGAACGACTTATGTGGCAAGAAAATCAGAGAGCGAAAGATCGGAGTTATTAAGTAAAGGTTCAAGTTCTACAAAAGTTGTTGGAGAGCCCGAAGCGGTGATAGAAAAAGTTGATGAAATTGGCTCCCTGATGAAAAGCGAGTGCGAAGGGACGGAAGAATCGATGGGCCACGTGAGCGACGATAACGAATCCATAGAGGAATTCGATCCGGACGACCCGTCCTTCCATTCGGCCGATGGCGACGAAGAAGTCGATTGTTCGGTGGAAAACTTGGAAAATTGTCCATCCGAAAAGGTCGAAGAAACACAGGATGTGAATAACGAAAATGCAATTTTAGTCGCAAAAGAATTACCTGTTAAAGTAGAATCTAAAGTCGATCGGAAAGCAGAAACAAACAAAGATGCTAATAAAACGGTTTATCAGTACGATGCGAAATTGAAAGCTTACGTTAAAGTTGAGCCTCCGGACGACGACGGCTATCAAGAGGATCAAGTTGACACGACCTCTGCGAAGGATAAAGATAAAATGGACAACAAACCGGAAGTAACGAGCAAGGACACAGTGAAACAGCCGAATATTCTCAAACGTAAGATTTCGATACACAAGGATTTTTTAGGGAATCCCGTGGCGTGCGTCAAACAGTCGGATTCGACGCTCGTCAGATCGGGACTGAAAGAAATGAAAAAATCCAAATTGGAGATAAAGAAACCAAAGTTGGACTTGAAAAAACCAATATTGGACTTGAAAAAGCCGTTGCTCGATATAAAAAAGCCAAAATTGGATGTGAAAAACGCGTTGAACGTACCGAACGAGAACGAGGACGGCATAATGTACGTCAGGGTAAAAGGAACTAAGCCGAACGAGGTTCTGCTGGTGAAAGTTAAAAAAATGGATAAAGGAGCTGACAATAAGAAGCAGGATGAAAAGAAGAAGCCAGTCGAGTCTTCGTTGCCGGTTGAGAAACTTTTGAAGAAGCTGGAGCCTTCGATAAAGAAAGAAACAGAATTTGAGATGGAGCGATCGAAGGAGCTGGACATAAGAGAGCGAAAAATCGCTGAACAGATTGAGGAGTACAAGAGAAGACGAGAAAAAATATTGGGTTCTAGTTCTGGAACACCAAATGCTCTGAAGATCGAAGATGGAACGATACGTTTCGTAAATTCTGCAGATAAACCATCGACTCCGGTGGACAATGGTTTACGAGTTAAAATCGAGCCGATCGATGACGTTGACGACATCCGGCACTTCATTGGTTCTCCGAAAGCTCAGCGGATAAAGGAAGAACCGAATAAGGTGAAAACCGAGGACTCCGAAGCTTATGACAATGCAGGAGAATATTTGACACGATTAGCAAAATTGAAAAAAAAGTGGGAAGAGGCGAAGAGAAAGAAGGAGAATTTAAAGCGTGAAATAGACGAGTCTTACACCGAAGGAAATATGGAAAAGTTGTCGCGAGTACTTGGCGAGAGGGAGAAAAACTTGGCTGATTTTCAGAGTTATTTAAAACAACGTAAAATCATAATAAATCGATTGACCGACGAAGACGTTATTTCGTTGTACGAGGATCGCAACAATGCAGCGTGTAAGAAAAATTTTCCGGATCTCATCGACGCTGCCGAACCCTTGGACTACATTGCGGAAGAAGATTATCTGGAGTGTGACTACTGTCCCGAGACATTTTCACTCCGGGACGTGCTCGAGGAACACTTGAAAACCCACGATTACAAGCTCATGTATTGGTGCGAAGATTGTCATCTCGAGTTTCCAACTGTCAAGACAAAACGTGCACACAACGCCGAATGCATTAACAAACTTACTTGTCGTTACTGCCAAATAGTTCTTGACTCGAAAGGTAAGAAGAGGCAACACGAGCAAAAACACGTTGACAATATGTACGGCCAAATGTGCGATGTTTGCGGTGAGAAATTCAAGCACCAAGCGACCCTCGATCAACATTTCAAAACCCAACATATGACCTGGGAGAAAATATATCAATGCACGAAATGCCCGAAAAAATTTGCATTCAAACAAAAATTGACGTTTCACATGAAATCTGTGCACACGACTCTGCGAGCATGGTTGTGCGAGGACTGCGGTGCCGATTTCAAGAATCCAGCAAGTTTGAGACACCATCGTATCAGAAAACATCATCCAACTGGTAACAAACGTGAATGTCAGGTTTGCCACAAACTGGTACCTTTTTACAGTCTATCGAAGCACATGTACACGCACAAAGCATACACGATACAGTGTCCACACTGTGACAAAATGTTTAAAAACAGCTCGACTCTTAAGCAACACGTTAGAATCCACGAGGACCAACGACAGTACAGATGCGACACTTGTGGCGTAGGTTTCAATCGTCGCGATGGTTTAAGACTGCACATGAGAGTGCATCAGAAGTCTGACAGTCGTTCTCTCAAAGAATGCTCCTGTCAGATATGCTCAGAAAAATTTCCCAACCACTCGATGCTCGTTATTCACAGAAATCGTGTTCACAAAGACGGCAGACAATACACTTGTCATATATGCAATCGTTCAATGTTGTCGACGAGGTCACTCGAGTGGCACATGTCTCATATTCACAACGAAACTATGCCTGGTGGCATTAAACAAGAGGCTGAAACACAACCAGAAAAGAAGCGAGTTTCTTGCGGACATTGCGATAAAACATTCAAAACTGAAATGATATTGAGGACTCATATTAAAAACACACATATCGAAAAAAATCCGACGAAATGTTTGGACTGCGACGAAATGTTCACGTCGGATGTACGGCTGAGGCATCACATGATGATCGCTCACAATAGACTGGAAGGAACACTCACTTGTCCACATTGCCCCAAACGTTTTGTCAATCAGTTACGCCTTAAAACTCACATGATTTCTCACTCCGAAGATCGGCCTTATACCTGCGAAATTTGCGGCTTTAATCTCAAGACGAAGATCCAATTGATCAAACATCATCAGAATCGACACAGCGATGAAAGACCCCTTCAATGTCGCTACTGCCCTTGGAGATGCAAACAAGTGAGTGCTCTCGTTTGCCACGAGAGAACGCACACCAATGAACGACCCTATTCCTGCATCGTTTGTCGACAGAGGTTCAAATATCTTGGCGATAAAAACAAACACGAGAGAAGACACGAGAGCCTCGGTGGCTCAGGATTCAAGAGGATCGTCGCTGGCAGAAACATCAAACAATCGAAACTTCAAACCGAAGAAACTTCCACCTCGGAACAAGACCAAATTGATTATGAAAATCAGGACGAAGAAGAACAACTTATCGAAGAACAACAGTCCGAAGAATTCACTGATGAAAAATACGCTGAAGAAGAAATCGTGAAATTCGAGTCCGAGGAAATGGCCGAAGAGTACGAACAACATTATGAACAGGAATACGAGGAAACGTCAAGAGAAGCCTCGGACGCTGCAGAAGTGATTATGAACATGGAAGACACGACGGTGTACACGGAGGAAGTAACAGCCGACAATATAGAGACAGCGGAAATGATAACGGACGAAATGATAACGGGTGATATTTTACAACCGGACATTACCGTTGTACATTTACAGCAACAAGATGATTCTGGTAAAATTCAAGTAATACCGGTAATGCTGTCACTCCCTGATCTGAGTGACACGAGCGCGGAAGTTAATTTAGCCACTGCATCGATAATGTACAATAATTGA
Protein Sequence: MSESIKNSSNLSVNENNDSDNFHENLQHDESNHDDLIRDLTSESIVTLDSVVSGNEQVQIVALPEIPAPINVGGGTSVQNSGSSKMTTDTAPKQDKTCPSPVSKPDKQDHDYVETQRTITPERSLKIFDKKACTIVKSNSALALRAPKRRMQAPIAQVKNINDLKKVTPRVKLISSEPTTLAQLTNPLGVTDGRSFLSQERARDQLRNYCRTCAGQKLPLVDIFSEKGMQMRLNQQMKHLEEIKEQDSLSTQMCMDCICDLKMSYKFFMQIKKAQVKLQSISSSLQVNTANVIKTNNDEDKSRPIATISLTDSPERTTYVARKSESERSELLSKGSSSTKVVGEPEAVIEKVDEIGSLMKSECEGTEESMGHVSDDNESIEEFDPDDPSFHSADGDEEVDCSVENLENCPSEKVEETQDVNNENAILVAKELPVKVESKVDRKAETNKDANKTVYQYDAKLKAYVKVEPPDDDGYQEDQVDTTSAKDKDKMDNKPEVTSKDTVKQPNILKRKISIHKDFLGNPVACVKQSDSTLVRSGLKEMKKSKLEIKKPKLDLKKPILDLKKPLLDIKKPKLDVKNALNVPNENEDGIMYVRVKGTKPNEVLLVKVKKMDKGADNKKQDEKKKPVESSLPVEKLLKKLEPSIKKETEFEMERSKELDIRERKIAEQIEEYKRRREKILGSSSGTPNALKIEDGTIRFVNSADKPSTPVDNGLRVKIEPIDDVDDIRHFIGSPKAQRIKEEPNKVKTEDSEAYDNAGEYLTRLAKLKKKWEEAKRKKENLKREIDESYTEGNMEKLSRVLGEREKNLADFQSYLKQRKIIINRLTDEDVISLYEDRNNAACKKNFPDLIDAAEPLDYIAEEDYLECDYCPETFSLRDVLEEHLKTHDYKLMYWCEDCHLEFPTVKTKRAHNAECINKLTCRYCQIVLDSKGKKRQHEQKHVDNMYGQMCDVCGEKFKHQATLDQHFKTQHMTWEKIYQCTKCPKKFAFKQKLTFHMKSVHTTLRAWLCEDCGADFKNPASLRHHRIRKHHPTGNKRECQVCHKLVPFYSLSKHMYTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHQKSDSRSLKECSCQICSEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMLSTRSLEWHMSHIHNETMPGGIKQEAETQPEKKRVSCGHCDKTFKTEMILRTHIKNTHIEKNPTKCLDCDEMFTSDVRLRHHMMIAHNRLEGTLTCPHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCIVCRQRFKYLGDKNKHERRHESLGGSGFKRIVAGRNIKQSKLQTEETSTSEQDQIDYENQDEEEQLIEEQQSEEFTDEKYAEEEIVKFESEEMAEEYEQHYEQEYEETSREASDAAEVIMNMEDTTVYTEEVTADNIETAEMITDEMITGDILQPDITVVHLQQQDDSGKIQVIPVMLSLPDLSDTSAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00829002;
90% Identity: iTF_00262870;
80% Identity: -