Basic Information

Insect: Campoletis sonorensis
Gene Symbol: -
Assembly: GCA_013761285.1
Location: JACEOJ010005747.1:14185-18968[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0088 0.72 10.6 2.3 1 23 370 392 370 392 0.95

2 19 0.029 2.4 9.0 0.5 2 23 442 463 441 463 0.96

3 19 0.0016 0.13 13.0 2.0 1 23 542 564 542 564 0.94

4 19 0.07 5.7 7.8 3.5 1 23 568 590 568 590 0.96

5 19 0.00035 0.028 15.0 4.6 1 23 696 718 696 718 0.97

6 19 0.0027 0.22 12.3 0.1 3 20 734 751 732 753 0.93

7 19 0.0012 0.094 13.4 0.6 1 20 762 781 762 786 0.93

8 19 3.8e-05 0.0031 18.1 3.9 1 23 894 916 894 916 0.98

9 19 6.5e-05 0.0053 17.3 3.9 1 23 1007 1029 1007 1029 0.97

10 19 0.0019 0.15 12.8 1.1 1 20 1034 1053 1034 1055 0.94

11 19 0.036 2.9 8.7 0.6 2 23 1066 1087 1066 1087 0.97

12 19 1.7e-05 0.0014 19.2 0.7 2 23 1126 1147 1125 1147 0.97

13 19 3.4e-05 0.0028 18.2 1.6 1 23 1152 1174 1152 1174 0.95

14 19 0.00052 0.043 14.5 1.1 1 23 1180 1202 1180 1202 0.98

15 19 6e-06 0.00049 20.6 0.4 1 23 1220 1242 1220 1242 0.95

16 19 1.9e-06 0.00016 22.1 0.3 1 23 1248 1270 1248 1270 0.99

17 19 3.3e-05 0.0027 18.3 1.1 1 23 1276 1298 1276 1298 0.98

18 19 0.0002 0.016 15.8 4.1 1 23 1304 1326 1304 1326 0.96

19 19 0.014 1.1 10.0 0.4 1 20 1332 1351 1332 1353 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0088	0.72	10.6	2.3	1	23	370	392	370	392	0.95
2	19	0.029	2.4	9.0	0.5	2	23	442	463	441	463	0.96
3	19	0.0016	0.13	13.0	2.0	1	23	542	564	542	564	0.94
4	19	0.07	5.7	7.8	3.5	1	23	568	590	568	590	0.96
5	19	0.00035	0.028	15.0	4.6	1	23	696	718	696	718	0.97
6	19	0.0027	0.22	12.3	0.1	3	20	734	751	732	753	0.93
7	19	0.0012	0.094	13.4	0.6	1	20	762	781	762	786	0.93
8	19	3.8e-05	0.0031	18.1	3.9	1	23	894	916	894	916	0.98
9	19	6.5e-05	0.0053	17.3	3.9	1	23	1007	1029	1007	1029	0.97
10	19	0.0019	0.15	12.8	1.1	1	20	1034	1053	1034	1055	0.94
11	19	0.036	2.9	8.7	0.6	2	23	1066	1087	1066	1087	0.97
12	19	1.7e-05	0.0014	19.2	0.7	2	23	1126	1147	1125	1147	0.97
13	19	3.4e-05	0.0028	18.2	1.6	1	23	1152	1174	1152	1174	0.95
14	19	0.00052	0.043	14.5	1.1	1	23	1180	1202	1180	1202	0.98
15	19	6e-06	0.00049	20.6	0.4	1	23	1220	1242	1220	1242	0.95
16	19	1.9e-06	0.00016	22.1	0.3	1	23	1248	1270	1248	1270	0.99
17	19	3.3e-05	0.0027	18.3	1.1	1	23	1276	1298	1276	1298	0.98
18	19	0.0002	0.016	15.8	4.1	1	23	1304	1326	1304	1326	0.96
19	19	0.014	1.1	10.0	0.4	1	20	1332	1351	1332	1353	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTGGATATGGATCCGGCGGCGGCGGCGGCTGCGGCTGCGGCGGTGGAGGATTCTCATGATGACACGATCGAGGAAACGGTACCCGAAGTTTGTCGGGTCTGTTTGCTCGGACATATGATAATGCGCGATCTTTTCGTCGAAAACAATGTCATTTCGCTCTCCACCAAAGCTATGAGCTTTGCTAGCGTTAAGATGGTACCCGACGACGGTTTGCCGGCTCAAGTTTGCTGCGATTGCGCCGACAAATTGGAAGCGGCTTACGAATTTAAACTTCAGGTGGAACAGGCGGACAACGTTTTGCGACAAAGGTACGACGGACTGAGTATCAAGGAAGAACTTTTTTTCAACGAAGTGGAAGTTGATCTGGAAGGTGAAAGAGTCGACGACGCGCGCGCTCTCGACGTAGACGTTCGTTATCGAGCGACGGTGGATAGTCCGAGCGGCGTCGATACCGATAGCCAAAAGTCTACGCTGCTAAAGGATCATTTGGCGCTTTTGGAAGTGGAAAAACTGTCGAAAGAACAAAGCGCCTTTGAAGGTGAGCACAAAGACGAACGAGTATCGGAGGAAGAAAGCAGCGGGGTGGTATCGGCGATGTTGGAAGCGAACGAGGGTGAGGCGCATTATTTGGACGAGAGCGAAGGCGGGAGCGTGGTGGTTGAGCTGGGTGATTGCAACGAGGTGGATTATCGCGGTGAAACGATAAAAGCTCAGGGGGGGATTCAAGATTCGGATGGGATAACGGCGGAGGAGCACAATTACATAATGCAGCAGGGCTTTGCGTTGACGTCCAACGAGGGTGAAGAATTGGTGTCGCAGGAGAGCGTTGATACGGTAAACAACGAGTCGGTCAATTATTTGGCATTGATGGAGGAGGAGGAGGAGGACGAAATGATAAAGAGGGTGGAGCGCTGCGAGCAACGAGAACAAGAGGAGAGTATGGAAAAAAGTGAAATTTCGACGAACGAAACGCGTCGCAGTAAACGCAAATTGACGAAACGTCGTCGTACGAGCGACGAGGATAATTATTTTGAAAATTTGAATCTGAGCAGTAGATTGAAACGAAGGCAATCGCAGGAGAAGAGCGAAAAATTATATTTTCTCTGTTATTTGTGCGACAAGAGATTCGTATCGAAAGAAATTCTGAAGGAACACATGCACTCGCACGAGGAAGTAAGACGCGCGTTATCCTTGAAGAAACAAGATAAATATGATAAATGTTTGACGAGTCCGAGTAAAAGTGGGGCGGCGTCTACGAGCGCCGCGTCTCCACCGATCGCCGGTGGCAATAATTTGTCGGGAAAAAAAGCCAACAAGTGTCCCTATTGTGGCAAAGAATATCTCTACGTCATATCATTCAACAAACATGTTCGTCAACACGAGAAAAGCAAAGGATTCGATTCTAAAGATTCTTCGGATTATCTCGATTATGACGAGACGAGAGAATCCATCGATACGAATAATCGTACAAATACTAATGAAAACGATAGTGTTGTTGGGGAGAATTTAGACGAGGAGCAGCAGCAGCAACACTTTGGAATCGAGTCCGAAGGTTTGAATTCATCGTCGAAAGTACACGGACGAAGATCATTGCGAAACGAAGCTCCTCCGTTTTACACTTGTGATAAATGTAACGAAAGCTTTGCCGACAAACGTTCATTTTTCGAACACTCGAGCCAACATTTTAGCATTTTTAAATGTAACACCTGCGAGTGTGAATTTGACGAATTGGAAAAACTTCGTAAACACAGAACGGAGCACGTGGTCGAAGGAGTTTTGTCGCAACAAGATCTCGAAGAAAACGTTTACGAGAACGAATTTGATGGAAAAATGCACGAAAACGATGCGAATGAAATTTACAAGAACGAAGACTTTGAAGGAGGAGGAGGAGGAGGGCATGAGTTGGAAAATTGCGATCAACGGGAAGACGAAGACGATGATGGGGATAATCGGGACATTGAGACGGAAAATTCGTGGCATTTGGAAGTTGAGGGCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGTCACGAGGAAATGAGAGATATTTCAGAAAATTGGAGAGCAAGTAAAAGTTACAAATGTCCACATTGTACGATAACGTGTTCGAGCAAAAAATCATTGATTCGACACGTAGAATATCACGAAGAGGCGGCGGCGGCGGCGGCGGCGAAGACGACGCAACAAATTTGCAAATTGTGCAAAGCCGTATTTGCGAGCAAAGAAGAATTACAACGGCACGTCGAGCAGGAATACGCTTGCAAAACGATTATATTCAAATGTACCGATTGCACCAAAATATTTGCCAATGAATTGACATTGAGAAATCACTTGTTCGCCACAGATCATAAAACGATCATTCATGGAGAACCTTATGATCCGAACAAAAGAATAAAGCGAGTAGCTGCAAAGGCGGCACAGAAAATAATCGATAAAATAAAGACAGAGGGCGATTTGGAGGATTCCGAGGATGAAGAAAAATTGATGAACAATTCGGAAGACGAGGCGGAGGAGCGGGAGGAGGAGGAGGAGGAGGAGGAAGAAGGAGAAGAAGAACACTTGGATTGCAGTGATTCAAAGATGAATAATGTTCGATGGGAACGTACAGATATTAAAATGGAGTCATCACCGAGAAAAATGCAAACGCAACGTAATCGTCGAAGACACAATTACGAGTGTGAAACTTGTGGACGTAAATGTCGCTCGAAGCAATCGTTGACGAAGCACATGTTGCAACATCGTGCCAAAGAGGAGGAGGAGGAGGAGGCGGAGGAGGAGCGCATCGATATGAGGGAAAAGTTGGAAAGTTTGAGTAGAAACAATTGTGCTCCGACAATGTCGAGCGAGAGGTCAGGATCGTTCAACAATCAACAACAACAACAGCAACACACGAATAGAACGATGAATTTGAAGAGGGCAGAAAAAAGGGAGGAGGAGGGGGAGGAGGAGGAGGAGGAGAAGGACGATAATTCGGATTTCGAGAGTGGTCTCGATTGGCCGGTGGACAGTCACGAGTGTCCAACGTGTAAGAAAAAATACAGTACGAAAAAATCGTTGCTGCGTCATCAATTGTTACATCAAAAGCCCAATTTCGAGTGTGACATTTGCAGCGTTAAATTCTATCGTAAGGACAAACTAAAGTCCCATTATGACAAATGCTCGGAAAAAAATCCGGATCAAGTGAGAAAATGCAATATTTGCGGTGATACGTTTGAGAATAACGATATATTGAAAGAGCACAGAAGTCGTCACGTGGACGAAGGTATATTGACGGAGGAGGATCTTCGCGAGATCGAACCGGGAATGGAGGAGAGAAAAGAATCGACGAAAGTGGCGCGAAAGAGACGAACCGATATCGTTGGATTGGAATGTACGGAATGCAACAAACGTTATACCTCGAGGAAAGGTCTTTTGCGTCATATACAAGTGCACGAGGGTAAAAAGTATCTGTGTGACATTTGTCCAAAGAAATTTTATCGTCGCGAACATTTAAAGATTCACGTAGCCAAGCACAACATGATTAAACCGTACAAATGTCCGCGTTGCACCAAACGTTTCATCAAAGAGGAACAGTTGTCGGGTCATTTGTCGAAACACGATCGTACCTTTAAAAAGCCCAAGGAAACCACCACCGACACGTCAAAGAGATTTTTGTGCGAAATATGTTCCAAGAGTTTCACCCAATCGACCACGCTGATCGCACATTTGAGAGCACACAACGGTATTAAACCTTACGTGTGCGAAGTTTGCGCGCGTCCTTTTACCACGAATGCTTATTTAAAAATGCACATGAGAACTCACACCCAAGAGAGACCCTATACCTGTCAACATTGCTCGAGAGCTTTTGCTCGGGCCGATACTTTGGCCAATCATTTGACATCTCACACCGGTGAAGCCAAATATCATTGCAAATATTGTCCGAAAAATTTTCGACGTCTCAAATCTCTCAAAGAACACGTATTCATTCACACCGGTCAACGACCCTACGCCTGCCCAACCTGCGATCGTCGTTTTAATAACAACGGTAGTCGTTACGCTCACAGCAAAAGATGCAAACAAAATCACTTGCAAAATTCCAATCGACCGCCAACCACCAACAACACCTCCTCCTCCTCCTCCTCATCCTCCTCCGCCACCACCACCACCACCACCACCACCACCACCCCAACCATCCTTGATCCAATGTTACAAGATCAATCGATTGTACACAATCAGATCGTACAACCCATCAGACTTCATCAGTTGACGACTACTCATCAATTACTTTCCGACCAACACGATCAACAAACTCAAATACAATTGGTCAAATCACAGTCGATCAAAACCATCACCATCGCCAGAACTACCGACGATCATCTCAATGGATCTCAAATGATGCAACATCAGGAAATACTCATGCCGCTTATCTTACCTCTGACCGTCACGCTCACTGACCCCGACCAAGAAGTCATTTTGCCCGAAGGCACCAAAATTTATACCACCGCTTAA
Protein Sequence: MDAVDMDPAAAAAAAAAVEDSHDDTIEETVPEVCRVCLLGHMIMRDLFVENNVISLSTKAMSFASVKMVPDDGLPAQVCCDCADKLEAAYEFKLQVEQADNVLRQRYDGLSIKEELFFNEVEVDLEGERVDDARALDVDVRYRATVDSPSGVDTDSQKSTLLKDHLALLEVEKLSKEQSAFEGEHKDERVSEEESSGVVSAMLEANEGEAHYLDESEGGSVVVELGDCNEVDYRGETIKAQGGIQDSDGITAEEHNYIMQQGFALTSNEGEELVSQESVDTVNNESVNYLALMEEEEEDEMIKRVERCEQREQEESMEKSEISTNETRRSKRKLTKRRRTSDEDNYFENLNLSSRLKRRQSQEKSEKLYFLCYLCDKRFVSKEILKEHMHSHEEVRRALSLKKQDKYDKCLTSPSKSGAASTSAASPPIAGGNNLSGKKANKCPYCGKEYLYVISFNKHVRQHEKSKGFDSKDSSDYLDYDETRESIDTNNRTNTNENDSVVGENLDEEQQQQHFGIESEGLNSSSKVHGRRSLRNEAPPFYTCDKCNESFADKRSFFEHSSQHFSIFKCNTCECEFDELEKLRKHRTEHVVEGVLSQQDLEENVYENEFDGKMHENDANEIYKNEDFEGGGGGGHELENCDQREDEDDDGDNRDIETENSWHLEVEGEEEEEEEEEEGHEEMRDISENWRASKSYKCPHCTITCSSKKSLIRHVEYHEEAAAAAAAKTTQQICKLCKAVFASKEELQRHVEQEYACKTIIFKCTDCTKIFANELTLRNHLFATDHKTIIHGEPYDPNKRIKRVAAKAAQKIIDKIKTEGDLEDSEDEEKLMNNSEDEAEEREEEEEEEEEGEEEHLDCSDSKMNNVRWERTDIKMESSPRKMQTQRNRRRHNYECETCGRKCRSKQSLTKHMLQHRAKEEEEEEAEEERIDMREKLESLSRNNCAPTMSSERSGSFNNQQQQQQHTNRTMNLKRAEKREEEGEEEEEEKDDNSDFESGLDWPVDSHECPTCKKKYSTKKSLLRHQLLHQKPNFECDICSVKFYRKDKLKSHYDKCSEKNPDQVRKCNICGDTFENNDILKEHRSRHVDEGILTEEDLREIEPGMEERKESTKVARKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCPRCTKRFIKEEQLSGHLSKHDRTFKKPKETTTDTSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCARPFTTNAYLKMHMRTHTQERPYTCQHCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNHLQNSNRPPTTNNTSSSSSSSSSATTTTTTTTTTPTILDPMLQDQSIVHNQIVQPIRLHQLTTTHQLLSDQHDQQTQIQLVKSQSIKTITIARTTDDHLNGSQMMQHQEILMPLILPLTVTLTDPDQEVILPEGTKIYTTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00262827;
90% Identity: -
80% Identity: -