Basic Information

Insect: Campoletis raptor
Gene Symbol: -
Assembly: GCA_948107755.1
Location: OX403624.1:23900835-23907688[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.45 38 4.9 1.0 1 13 243 255 243 256 0.88

2 14 3.4e-05 0.0029 17.9 1.1 1 23 500 522 500 522 0.98

3 14 3.7e-05 0.0032 17.8 0.2 3 23 534 554 532 554 0.92

4 14 1.4e-06 0.00012 22.3 1.3 1 23 560 582 560 582 0.97

5 14 0.012 1.1 9.8 1.6 1 23 587 610 587 610 0.97

6 14 0.0096 0.82 10.2 4.9 1 20 616 635 616 638 0.95

7 14 0.0038 0.32 11.5 0.6 1 23 644 667 644 667 0.96

8 14 0.002 0.17 12.3 3.8 1 23 870 892 870 892 0.97

9 14 0.00076 0.065 13.7 1.0 1 23 902 924 902 924 0.98

10 14 0.1 8.9 6.9 1.1 1 23 934 956 934 956 0.95

11 14 0.0014 0.12 12.8 1.1 1 23 998 1020 998 1020 0.98

12 14 0.17 14 6.3 1.8 1 23 1030 1052 1030 1052 0.93

13 14 0.00013 0.011 16.1 4.1 1 23 1058 1080 1058 1080 0.97

14 14 0.026 2.2 8.8 0.5 1 23 1085 1108 1085 1108 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.45	38	4.9	1.0	1	13	243	255	243	256	0.88
2	14	3.4e-05	0.0029	17.9	1.1	1	23	500	522	500	522	0.98
3	14	3.7e-05	0.0032	17.8	0.2	3	23	534	554	532	554	0.92
4	14	1.4e-06	0.00012	22.3	1.3	1	23	560	582	560	582	0.97
5	14	0.012	1.1	9.8	1.6	1	23	587	610	587	610	0.97
6	14	0.0096	0.82	10.2	4.9	1	20	616	635	616	638	0.95
7	14	0.0038	0.32	11.5	0.6	1	23	644	667	644	667	0.96
8	14	0.002	0.17	12.3	3.8	1	23	870	892	870	892	0.97
9	14	0.00076	0.065	13.7	1.0	1	23	902	924	902	924	0.98
10	14	0.1	8.9	6.9	1.1	1	23	934	956	934	956	0.95
11	14	0.0014	0.12	12.8	1.1	1	23	998	1020	998	1020	0.98
12	14	0.17	14	6.3	1.8	1	23	1030	1052	1030	1052	0.93
13	14	0.00013	0.011	16.1	4.1	1	23	1058	1080	1058	1080	0.97
14	14	0.026	2.2	8.8	0.5	1	23	1085	1108	1085	1108	0.97

Sequence Information

Coding Sequence: ATGTTCCACTGTTTTGTTTTTGTGGTGAAACGACGGAAAGGAAGGAAAGAATTAAGCTTCGCCGTCGACGATGATCCAGAGACCGAAGTGGATATCAAAGAGGAATTTTGTAAAGAAGAAATAGGGGAAGCTGATCCATTGGACATTGGATGTCATTGTTCGAAATTGGGCGACATCGTAGGCGAGGGAGGAGGAAAAAAGTGTAAAAAAAATCGGGACAAAATAGGATACGAGTGTAAGCCTTGCGGTTACAAATTTTTCTTTAAATCAAAGTTCATCTCGCCAGATCCGCTAGGGCCCGACTATCTGACGGTTAAGATAATGGACGATATCTATCGTATTCCAAAATCCAAGTGCTACATGGTATTGAATCATCCAGCGATGGGCAATAAAGGGGTATTGGATCAAACGCCATTTCTGGAAGTGGATAATTTCGCAAACGTTGGAATAGTCGCTGATAAAGAAGTTGCCAACGCGTCTAGGCCATCAATGAATTTCAACAGTAATATACCAATGGTTAAAATTGGTTGTCCCTTTGAAATGGAGATTGCGCCTAAGCCCGTTAAGAAAAGAGGCAAACGAGGAAGAAAACCAGCAGCGGCACCACCGAGAGACAATAAAAAGACTCGAGCGAAAGAAGAAACGAGGCAGGAGAAGCCTGCTGAAAAAAGTTCGTTCGAATGTACTTGGGTGAAGAGCGAGCCGGAAGAGGTCAAAGAGAAAGAATTTTTATGTACCACTTGCCCGAAAAAATTCCGTACCAATCCATGTGGTTGGAAGACTCGCGCGAGATGTGTGAACCAGAAGGATTACGACAAATCATCCAAGAGTCTATTTGGCCCAACGTCTTTCGTTCGCAAGATATGCGGCGGCATCTCGCCCCGGAAATTTTTTAGGTACATCACGCCAGATCCGCTAGGGCCAGATTATCTGACGGTTAAGATAATGGATGATTTCTATCGAATACCAAAATCCAAGTGCTACATGATGTTGACACGTCCAAAAATCGGGGACAAATCGACGTTGGATAAAAATTTGACGAAGGATATAGAGAGTGGGGAGAGCAGCAACATTGAAGCTCGTATCGACGGAGAAACAGTCTCGTTGGTACGTTTAAAATGTAGCGAGATTGCAACAACAACAACGTTGAAGCTCGAGCGTTCCTCGGACTTGGAAATTGCGCGTGAACCAGGGAAGAAAAGAAGAAAAGTAAGAGGAGCGAACGAGAAGCGAGAGAGAGGAAAGAAAAAGTCTCGTCCGATCGAAGAAACTGAGCAAAAGGAGGAAATTGAGTATGAAAAATGTGTGGAGATACGTGATTCGGAAGATTTGGACAATGTGCCGTTGGACGATCGGGAAACGCGTCGAAAACGCGAGGATAATGTTGACAATATTTTGGACAACGATCCTGTGGATTCTGGTGGTGAAGCAGAAATCAAAGAAAAACATTCAACGGATAAGAAAAAAAAGAGTGATAAAAAATCGGCGTCAATGGCGTACGAGTGCGAGCCTTGCGGATACAAATTTTCTCGTAAATGGAAATACGAGAGACACATGAATTCGCATTCGAGGAAAAAAGTTGAATCGACCAAGTTGGAGTGTGCTCCTTGCGGTAAAAATTTTACTCGACCCTcggcgtacaagcaacacatgttgaagcacagcaacgagaagcctcacaagtgtgacgtttgcgacaaggctttcaagagaccgtacgaattaaagatgcatcgtgagattcacagtggttcgatgcatacttgtgacatttgtagTTTCAGTACAGCGTACAAAGTCTCACTGATGGTGCACAAAAAACGAGTTCATCAAAAGATCTATCGTCACAAGTGCGACGAGTGCGAGAAAGCTTTTATGTCGAAACACGAATTGGAGGATCATCGAACTTGTCATCTCGGTGAAAAGAGTTTCATATGCGAAATATGTGGCAATGGTTTTTTGCAACGAAGCTATTTGGTTCATCACAAACGCGTTGTACACGGTGTTCACAATCGAGCACCGATGGAGCTCAAATGTGAAATGTCCGCCGTTCCAGATCCGCTAGAGTCGGAGTTTCTCATAGTAAAGATATTGGACGAGTTCTACCGAGTACCAAAGTCCCAGTGCACGAAGGTATTGACCCTTACACCGTATCCGGACTCGGCGAAACCGGATAAATCATCCGCGAGGAGGAACAAGAGATCGGCGAAGAGAAAAGAAAAAATTGCGGAGGAGGAAAAAGCGCGAGTGGCCGCGCAGGCGATGGAGTTTGTTGCTGTGAAAACGGAATATCCTTCGGACGAAGAAATGACGAAATTGGAAATGTCGTCCATTGAGCAGAACGCGTTGGAAGAGAAGGAGACTGAAATTCCCAACGAATCACCAACCAAAGACTATGAGATTAAGGATGAAACGGAAGCGACACCCGCGATCAAGCACGAATCTATTGATCTCGACGACGTTCCTCTCTATGAGCGAGAAATGTTGCTATTGAAAGAGGATAAACGTCAAGAGGAAGAGCGGTCGAACGATGAAGAAAACGAAGGTTTCTCAATAGTTGGATTTCGTAAATCTGCTGACTTTATAAAATCGAAAAGCGATGCGATGTTCGTGTGTAAACCTTGTGGTTACTTGTTCAAGCACAAATCCAAATACGAGAGGCACATGTACATGCACAATGGTCAACGACCTCGTTTGAAAAGTTACAAGTGCGAGCCTTGCGGATTTAAATTCTCGTCGAAGCCAAAATACGATCGTCACATGAATATTCACAACAGGGAGGACGATAAAACTGTTAATTTCGAATGCAGGCCTTGTGGTTTTCAAACGGCTTACAAATCAAAGTACGATCGTCACATGAAAATTCACAGTAAAAACAAAAGCGAAGAATCGCCTTATCATTGTTGTCCTTGCGGATACGATTTTCCTTGTCAATCCGAATACGACAGACACATGACTCTCCACGTTGGCAAACATTCGGAATCCATGAATTACGATTGTGAAATTTGTTATGAAAAATTCGATACTAAATGGAGATACGATCGTCATATTAAAACTCACACGAGAATTAAACCCGAACCCGTTGACTACGAGTGCGAAACTTGTGGTAGACACTTTTTGGGCATCAATCCATTCAAAAAACATCTCAAGTCCCATAGCAACGAGAGACCGCACAAGTGTGATTTGTGCGGTCGTGCTTTCAAACGATTGCACGAGATGAAAAAACATCGTGACATACACGGTGAAAGTGTTTACAATTGTGACACTTGCGACTTTTCGAGCAATTATTGGCTCGTACTGAGGTCACACTTGCGATCCGAACATCGAGCCAGTCGGTCTGATAAAAGTGATCGCAGTGAAGAAACTTGA
Protein Sequence: MFHCFVFVVKRRKGRKELSFAVDDDPETEVDIKEEFCKEEIGEADPLDIGCHCSKLGDIVGEGGGKKCKKNRDKIGYECKPCGYKFFFKSKFISPDPLGPDYLTVKIMDDIYRIPKSKCYMVLNHPAMGNKGVLDQTPFLEVDNFANVGIVADKEVANASRPSMNFNSNIPMVKIGCPFEMEIAPKPVKKRGKRGRKPAAAPPRDNKKTRAKEETRQEKPAEKSSFECTWVKSEPEEVKEKEFLCTTCPKKFRTNPCGWKTRARCVNQKDYDKSSKSLFGPTSFVRKICGGISPRKFFRYITPDPLGPDYLTVKIMDDFYRIPKSKCYMMLTRPKIGDKSTLDKNLTKDIESGESSNIEARIDGETVSLVRLKCSEIATTTTLKLERSSDLEIAREPGKKRRKVRGANEKRERGKKKSRPIEETEQKEEIEYEKCVEIRDSEDLDNVPLDDRETRRKREDNVDNILDNDPVDSGGEAEIKEKHSTDKKKKSDKKSASMAYECEPCGYKFSRKWKYERHMNSHSRKKVESTKLECAPCGKNFTRPSAYKQHMLKHSNEKPHKCDVCDKAFKRPYELKMHREIHSGSMHTCDICSFSTAYKVSLMVHKKRVHQKIYRHKCDECEKAFMSKHELEDHRTCHLGEKSFICEICGNGFLQRSYLVHHKRVVHGVHNRAPMELKCEMSAVPDPLESEFLIVKILDEFYRVPKSQCTKVLTLTPYPDSAKPDKSSARRNKRSAKRKEKIAEEEKARVAAQAMEFVAVKTEYPSDEEMTKLEMSSIEQNALEEKETEIPNESPTKDYEIKDETEATPAIKHESIDLDDVPLYEREMLLLKEDKRQEEERSNDEENEGFSIVGFRKSADFIKSKSDAMFVCKPCGYLFKHKSKYERHMYMHNGQRPRLKSYKCEPCGFKFSSKPKYDRHMNIHNREDDKTVNFECRPCGFQTAYKSKYDRHMKIHSKNKSEESPYHCCPCGYDFPCQSEYDRHMTLHVGKHSESMNYDCEICYEKFDTKWRYDRHIKTHTRIKPEPVDYECETCGRHFLGINPFKKHLKSHSNERPHKCDLCGRAFKRLHEMKKHRDIHGESVYNCDTCDFSSNYWLVLRSHLRSEHRASRSDKSDRSEET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -