Crap015353.1
Basic Information
- Insect
- Campoletis raptor
- Gene Symbol
- Hivep1
- Assembly
- GCA_948107755.1
- Location
- OX403630.1:6253710-6262093[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 6.2e-05 0.0053 17.1 0.6 1 23 101 123 101 123 0.98 2 9 0.019 1.6 9.3 2.1 1 21 129 149 129 153 0.86 3 9 0.0038 0.33 11.4 0.1 1 21 376 396 376 397 0.96 4 9 1.4e-06 0.00012 22.3 1.6 1 23 1156 1178 1156 1178 0.99 5 9 5.9e-06 0.00051 20.3 5.1 1 23 1184 1208 1184 1208 0.92 6 9 1.9e-06 0.00016 21.8 0.1 2 23 1882 1903 1881 1903 0.97 7 9 0.00074 0.064 13.7 1.8 1 23 1909 1933 1909 1933 0.92 8 9 0.0013 0.11 12.9 3.3 1 23 1954 1978 1954 1978 0.93 9 9 0.055 4.7 7.8 1.4 1 19 2144 2162 2144 2167 0.94
Sequence Information
- Coding Sequence
- ATGACAGACCCACAGTTGACGAATAATAACAACAACAATAACAATAACAACAATAACGATGGAGAGCCAAAGTATTTGCACAAAAAGTTCAAAAAGATGGCGACGAGCGAGACGTCGTCGCCGACGGTGGTCGAGACAAAAAATCATTTGTCCAACAGTGAAAATACGACGACAGGAGCGCCTTCTGAAATAAATCGGAAACGCAACCTCCCCAAGGAAGTCGTGAAAGAGTCTTCCAGAACCACCGAGGTCGGATCTCCCGAACCCGAGGGCGAACCGACCGAGTCACGGAAAACCGGATATGTTTGCCCCTATTGCAAACTCTCCTGTGCCAAACCGAGTGTCCTACAGAAACACATTCGTGCCCACACTAATGAACGACCTTATCCGTGCGTACCTTGTGGTTTCGCCTTTAAAACTAAATCCAATCTCTACAAACACTGCAGATCCAGGGCTCATGCACTCAAAATGGAAGGTGGCGATCCCAGTAAGGTGTCGGAGGATTCGGACATAAGTTTATCGGACAGTGCGAGTAACGGGACAGGAACGCcaccaccgccaccacaagcgacgatgacgacaacgacaacgacgacgatgacgacaatgtcatcgtcacaaggatcgtcaacgacgTGCGTAAAAACGGTTAAAACTGGCAAAATATACAAGCCGAAATTTCATACGGGTCTTCAGAGTGTGAGCAGCGGTGAAACGACGACAGAGATTTCGATGACGTCAAGTTCGTCGAACGGTTCGACGAGTAGCGGCGGAAGCGGAGGTTCGAAACCAAACGCTGAAAAATTGCAGGAGCATATAGACAAAATAATAACGGATAACCAGGCGATAGTGGAGGCGATTGATCCGAGATTACACAAACTTATGCAGCGACAGCAGAGTCTCGTGGAGACGAAAAACATAAATAACAACAATAACGAGCAGCCGTTGAATCTTTCATCAATCGAGGAATGCTCGACAACGAGAAAACGTTGTTACAGCGACAGTTTTGCTCAGGAGAAAAGAGACGTTACAAAGATTAATCCAGAGGGTTCGATAATAAAAGATTTATTATTAAAATCACGTGGAACGAACGGCGAGGAAAGTCCGTTGACAGAAAGCGAAAACTTCGTTTGTTCTACGTGTAAAATGAGTTACGGAAGTGCTGACAGTCTCGAGGCTCATCGTCGATATTATTGCAAAGGAAATTCGAGCCCGAGTCCACGAAGAACTGATTTTCAATTGGATCTCGACAAACGCGAGGATTATGAGAGTCCAAGAAGCTGCGATTATTACGGTGCCATTCAACCTTTACCTTCACCGGGACCATTGCTTGGAAACACAAGACTCGTTGATGCATATCCACCACCAGTGAAAAAGCAGCGTCCCGAATCCGTACCAACGAGTCTACGTTCGCTCGAGGAACTCTCCAAATATCCGCGGCCAAATTCCCTTCAAATGTTCGGTGGCGAAGTTCGTATACTTGATAATTCCGGAGAAACGAAAACCATGAGAATCGAACCGAGACAAACGGGTTCACCGTCGAACGAACATCTTGTTAATAATAACAAATGCGTTACATCGGAAACCTCCTCGATCGTTGTACGCTCAGGTTTACACTCGGGTGGAACAATGCTTCATAAACCTCCCAACACTCCCGTCACTAACTCCACTCCAAATTCCAGTATTTCACTTCCCAATACACCGAAAATTTTAGCACCAATAATGCCCAACATATCAACACCAAATCTTGCACCCACAATGTCCTGTTACAATTATTTGGAACCACATTTAAATCCACTCACAAGTATCACTGCCTACAATCCTTTGACCTTGCCACAAGCTGGCATCGCGAGTATACTTCACGGTGGCAAAGTCATACCGTACGTTCCTGGTATGCCCGGACCCCACAGCCTCAACTCCAATCCCAACAACAGTAATCTTGACATATCATCTGACCTTACGAGCCTGGATACGTCAACGACAACCTACAAGGTCATTCCAGGCTTACCGGGTCTCCACGTTATTTCTCAACCCCTTGACCTCGCCAGTCCAGTTAGAGTACAAACCCCCAACATCCCTGGCATCCCTGGACCAACATCCAACGGTCCACACACCCTGCCTATTCCTCTCGATCTCGCAAGCAGTCCTGCCAAGGAGCCAAAAATTCATTTGAAGAATCCTGTTGATAATTCGAGATCAATTTTACTCACGAGTCCCAAAATTCTCACTCCCAAAACACCCACCTCTAACAACGACTCTACGAATACCAACGACAAATGGAGACTGCCCAGGACTTGCTCAACACCAAACACCATCGAATATTCAAAAAATAATAATGAGCTCGATCGCCATATCAAAAATAATTCACAACAGAAATACACAATTTTACCTGACAATGTTCGGGACCGTAAGGAATTTACGTTTGAAAAAAATTCGAAAATTACCGAACAGCCTCCCTTCAATTTTACAAATGGCAACGATTCCAACAGTCGATTGTCACCTAATTCTTATACCAAAAGATTTTCACCCAAAACAACAACGAGTGAGAGCAGAAAACGATCGTCCACCTGGAGCATAGCGGAGCTTGAGAATCCTGCAAAATTTGAGGCTTCAATCTCACCCACAACGATGTATAACAATCCGCAAGACAACGAGAGAATGAGAATCGATTCGATGCCTGAAACAAAGTCTACCGTTATCGAGAATTATATTAATTTGAACGGTGTTAAACCGCGAAACGATTCGATCTCTCAGGTCATCGTAAACAACGTCGAAACACACAAAATGTCTTATTTCCCTGGCAAAAATACTAGCGATCTTACAATCAAGGTCGATCGCCCGGAAATCAAAGTTAACGGCGGTGAGCTCGTTCCCAAAATCGACAAACCTGAAGTCAAGGTCAACGACAATGAAATCATCGCTGAAGAAACTAGCACCAAATTCCTCAGACCCACTTCGTTGCCTTTGAAACCAGGTACTTTTACCCCAAAACGTCATCATGGAATAACACCGACTGCAAATACATTGCCTCTCATTAGTCCCGAAACTCCGAGACCTAAAAAATCCTATGGACAACTTTATCTCAATGGACACGCTTACACTTATCTTGGTCTCAAATGCTCCACTCGCGTTTTTTACTGCACCGTTAATCGACCTCAACCCATGTACGTCACTCAACAACACGGTTTATCCATGTACTCCAACTGGAAAATTTGCAAAGAAACACCACCCGACCTCGACATGGCACATTATGACTCCAGACATCGACCACCCAATTATACTGTCGCTTGGAAAAAACAGGATGATATTTTAACACACTCTTCTCATCGACCTACCACACCCACCAGCCCGGATAGCGGCCTCGAGAGTGATACTCAGGAAAAAACTCGTAGGGTCAAAATTTTTGATGGTGGCTTTGAAAGCAACGAGGATTACACTTATGTTCGTGGAAGAGGTCGAGGTCGTTACGTTTGTGAAGAATGCGGCATACGATGTAAGAAACCGTCGATGCTAAAGAAACATATCAGAACTCACACGGACGTCAGACCGTACACTTGCAAACATTGCTCGTTCAGCTTCAAGACAAAAGGCAACTTGACGAAACACATGAAATCAAAGGCTCACTACAAAAAGTGTGTCGAATTGGGAGTAACGCCAGTGCCAACGTCCGTGTGTGACGAAAACATAGACAAGGAGGCAATAGCGCGTTTGGTAGCAGGAGGTGGAAACGCGGATGACACATCGGACGAGGATGAAGAAAGTGAGGCGGAGGAGAGCGACGAATCGGGTAGCGAAGAGCAGGAAGCGGCTCAGAGTCTCTTGAGTCTTTCTCAGAGAAGTTCGAACCGAATTCCTGGACTTTTACCGAGCGGAAGACCAACGACTTATCCTTATGCTTTGAGTTTGGCTTGCGTGACGACGAGTCCAAGCGTgggaacaacgacgacgatgacgaccgcatcttcgtccatgaacgttacaacaacggcgacgacgatgatACAGAGCGAGCTGTCAAATCGTTACTATTTTCCATCAACGCGTTCTTCGGTTGTTGAAGAGCGTCGCGACAGTGTTATTCGTTCATCAAAAAGTGGTGAAGACTCTGACGTCGAAATCGAAGAAACAACGGAACCGGAAACTAGGGCTCAACCGATGGATCTCACGACGAGCAGTAAAACTTCGTCCCAAATAATCGGAAATCCAAGGCCACGTACCAACGATATTCTCACCCCGGTATCCGAACCCGTTCTCATGCAAACTATCGTTCAAACGATGGAACGTTTGCCCTTGCAATCAACGAGGGAATGGAAACCCGATGCCGATGGACAAATGCTTCAAGCATATCTCACCGAACGTCACGTTATGGACAGCAAAATGAAACAACAATATCGCGTTGGAAATACTAAATTAGAAAAACAAACTCATCCGGATAATTATGGCAAAAATGTCGATTTCATTAACTCTAGAAACACCGATTCAAGCAGTACGCCTACCGTTACTTACACCAATCCAAGCAGACTTCAACAAAGTGGACTCGATACGAGAATGAAGAGTATTTCGAAACCCCACACTACGGAGGACATCAAAATGGGAATAAGAGAAAAAATTTATCAGCACAACGGTGCTACCATTGAGAGACGACCATTCGACATTGAATCTCTCCACATCGACAAAGATAACAAACACGAAAACAACGATCCACGCATTTTTAATCCTGCGGCTACACGAGCCAACGAACATCACTCGATTATTACTAAAAATAGCTTGGAACGCTCGAATTTTCATATAGAAGCTGGACGCACAACTCCTGGATGCCTGGATCGTCAATCACCGAGAAATTTCAATTCTGATATTAACAACAGAATATTTAGCGGCTCGCAACCACCCAAGAACGAAATTGATCGGGAATCCATCTTCAAAAGTATCAATGAACTTGAAAGAACTCGGGAATCTACTATCAAAGATTATCGCGACGTCAGATCACGTGATTCGCCACCAGAAGCCAGAATTTTATCAAGTCCTGTCTCGAGGTGTCATGAAAATGGAAATTCCCAACCCCCCAGCAGAGAAATGAGAAATCCTACTCAAGATTATCGAGGTCCGACTTCTTTTCACGACGTCACTTCAAGATCATCTAGTCAAGAATTCAAACTTCCTCCTCAAGAATTAAGGCCACCGAGTCGTGAATTCAAATCTCCTCTATCAGACTCACGAACTTCCGAATTAAACAACATCGTCGTCGAGCAACAACGTCGAGCCAACCTCAATGACGTTCGTTCACCGAATCGTGAACAACGCAACGACCACCGAAGTCCTCACGACATCGCAAGAAACAATTTTGACACTCCACCTAATTTGCATCACGAGCCAAACAAATTACACGATATTTCGAGAATTCAAGCCTCCATCGAAACAAGAAATTCTGAACTCGCTGAAATAAAACGTCACGAAATGGAAAGGACCAAACAGAGCATATCCGAAAGCGTTAAACACACCGTCGCCAGGAAAATGGTCGTCGGTGGACCTGGTTTCAGATCTCCTTCACCCCCAGGTGGAAGCAACAAACCTCAAGCTGAATTTTTGCAACCTTCCTCCGGACCTGCCCCTAATTACGTCAGTGTGACCGAAGATGGTCGAAGTGTTTGTGGCATTTGCAACAAAGTATTTAGCAAACCGAGCCAGCTCAGATTGCACATAAACATTCATTACTTCGAGAGGCCATTCCGGTGTGAGAGTTGCGCCGTATCTTTCAGAACAAAAGGTCACTTGACCAAACACGAACGTTCGGTTTCCCATCACAATAAGGTCAGTATGACCTCCACCTTTGGCGCTGCGACAACGAGCAATCCAAGGCCCTTCAAGTGTACAGATTGTAAAATTGCTTTTCGAATTCATGGACATCTCGCCAAACATTTGCGCAGCAAAATGCATATTATGAAACTCGAGTGTTTGGGCAAACTTCCTTTCGGTACCTACGCCGAGATGGAACGTTCCGGCGTTAATCTCAACGACATTGATACCACCGACTGTGATAATAGTTTAACTAGTCTCCAGATACTGGCGCAGAAGCTTTACGAGAAGGATCCCAGCAAAATGGGCCAATGGGACGCAGAAATGTTGCCACACCAGGGTGCAAGTGGTGGAGAAACGTCATCGGACGAAGGTGAGCCAATACCTGGTCATAATTTGCACCAATATGGCCCACAGCAGATGAATAATCAAGAAATGGAAAATTCGCGTGCATATCACATGCCCATGTTGGTGGGCGACGACCAAAAATCTTTAAACGATAATGGTCGCATTGTAAATACGCATTACGTCGTTAATTCGCAGCAACAGCAACAGCAAAGACTTGATTACGGTAGAATACAAGATAATCACGAAAACATACGGGTCGTGGACGACGAAATGTCGTCGTCGAATCCTTACAAGTGCCAAATTTGTTCGTTTTCCGTGAGAACTGCGAACGAGCTACAAGTTCATTGTTTCGTCGAGCACAACGGTGATTCTCAAAAGCTTAAAAATTCTCAATGTCATCAAAACGAACAACAACAGCCAAGGGACAACAAAGACAATTTTCATAAACGTATTACCGAAGAAATGAGCCTCGTACGTAGCGACGAAAAAATCAAGCGAAAGAGCGAAGATTCATAG
- Protein Sequence
- MTDPQLTNNNNNNNNNNNNDGEPKYLHKKFKKMATSETSSPTVVETKNHLSNSENTTTGAPSEINRKRNLPKEVVKESSRTTEVGSPEPEGEPTESRKTGYVCPYCKLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHCRSRAHALKMEGGDPSKVSEDSDISLSDSASNGTGTPPPPPQATMTTTTTTTMTTMSSSQGSSTTCVKTVKTGKIYKPKFHTGLQSVSSGETTTEISMTSSSSNGSTSSGGSGGSKPNAEKLQEHIDKIITDNQAIVEAIDPRLHKLMQRQQSLVETKNINNNNNEQPLNLSSIEECSTTRKRCYSDSFAQEKRDVTKINPEGSIIKDLLLKSRGTNGEESPLTESENFVCSTCKMSYGSADSLEAHRRYYCKGNSSPSPRRTDFQLDLDKREDYESPRSCDYYGAIQPLPSPGPLLGNTRLVDAYPPPVKKQRPESVPTSLRSLEELSKYPRPNSLQMFGGEVRILDNSGETKTMRIEPRQTGSPSNEHLVNNNKCVTSETSSIVVRSGLHSGGTMLHKPPNTPVTNSTPNSSISLPNTPKILAPIMPNISTPNLAPTMSCYNYLEPHLNPLTSITAYNPLTLPQAGIASILHGGKVIPYVPGMPGPHSLNSNPNNSNLDISSDLTSLDTSTTTYKVIPGLPGLHVISQPLDLASPVRVQTPNIPGIPGPTSNGPHTLPIPLDLASSPAKEPKIHLKNPVDNSRSILLTSPKILTPKTPTSNNDSTNTNDKWRLPRTCSTPNTIEYSKNNNELDRHIKNNSQQKYTILPDNVRDRKEFTFEKNSKITEQPPFNFTNGNDSNSRLSPNSYTKRFSPKTTTSESRKRSSTWSIAELENPAKFEASISPTTMYNNPQDNERMRIDSMPETKSTVIENYINLNGVKPRNDSISQVIVNNVETHKMSYFPGKNTSDLTIKVDRPEIKVNGGELVPKIDKPEVKVNDNEIIAEETSTKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTVNRPQPMYVTQQHGLSMYSNWKICKETPPDLDMAHYDSRHRPPNYTVAWKKQDDILTHSSHRPTTPTSPDSGLESDTQEKTRRVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCSFSFKTKGNLTKHMKSKAHYKKCVELGVTPVPTSVCDENIDKEAIARLVAGGGNADDTSDEDEESEAEESDESGSEEQEAAQSLLSLSQRSSNRIPGLLPSGRPTTYPYALSLACVTTSPSVGTTTTMTTASSSMNVTTTATTMIQSELSNRYYFPSTRSSVVEERRDSVIRSSKSGEDSDVEIEETTEPETRAQPMDLTTSSKTSSQIIGNPRPRTNDILTPVSEPVLMQTIVQTMERLPLQSTREWKPDADGQMLQAYLTERHVMDSKMKQQYRVGNTKLEKQTHPDNYGKNVDFINSRNTDSSSTPTVTYTNPSRLQQSGLDTRMKSISKPHTTEDIKMGIREKIYQHNGATIERRPFDIESLHIDKDNKHENNDPRIFNPAATRANEHHSIITKNSLERSNFHIEAGRTTPGCLDRQSPRNFNSDINNRIFSGSQPPKNEIDRESIFKSINELERTRESTIKDYRDVRSRDSPPEARILSSPVSRCHENGNSQPPSREMRNPTQDYRGPTSFHDVTSRSSSQEFKLPPQELRPPSREFKSPLSDSRTSELNNIVVEQQRRANLNDVRSPNREQRNDHRSPHDIARNNFDTPPNLHHEPNKLHDISRIQASIETRNSELAEIKRHEMERTKQSISESVKHTVARKMVVGGPGFRSPSPPGGSNKPQAEFLQPSSGPAPNYVSVTEDGRSVCGICNKVFSKPSQLRLHINIHYFERPFRCESCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLTSLQILAQKLYEKDPSKMGQWDAEMLPHQGASGGETSSDEGEPIPGHNLHQYGPQQMNNQEMENSRAYHMPMLVGDDQKSLNDNGRIVNTHYVVNSQQQQQQRLDYGRIQDNHENIRVVDDEMSSSNPYKCQICSFSVRTANELQVHCFVEHNGDSQKLKNSQCHQNEQQQPRDNKDNFHKRITEEMSLVRSDEKIKRKSEDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00263776;
- 90% Identity
- -
- 80% Identity
- -