Basic Information

Insect: Campoletis raptor
Gene Symbol: -
Assembly: GCA_948107755.1
Location: OX403624.1:4511460-4521223[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.13 11 6.7 3.8 1 23 416 438 416 438 0.98

2 19 0.00015 0.013 15.9 0.8 2 19 474 491 473 495 0.90

3 19 0.0033 0.28 11.6 5.3 1 23 501 523 501 523 0.98

4 19 0.001 0.088 13.2 0.1 3 23 531 552 529 552 0.92

5 19 5.9 5.1e+02 1.4 1.1 1 23 559 582 559 582 0.96

6 19 4.1e-05 0.0035 17.7 0.7 1 23 586 608 586 608 0.97

7 19 0.0018 0.16 12.4 0.5 1 23 614 636 614 636 0.98

8 19 3.2e-05 0.0027 18.0 2.0 1 23 642 664 642 664 0.97

9 19 0.001 0.09 13.2 0.1 1 17 669 685 669 686 0.92

10 19 2 1.7e+02 2.9 0.7 3 20 1154 1171 1152 1174 0.91

11 19 7.7 6.6e+02 1.0 2.1 1 23 1180 1203 1180 1203 0.96

12 19 0.00016 0.014 15.8 0.8 1 23 1209 1231 1209 1231 0.98

13 19 0.76 65 4.2 0.8 1 23 1237 1259 1237 1259 0.97

14 19 4.8e-05 0.0041 17.4 0.8 2 23 1266 1287 1265 1287 0.95

15 19 0.37 32 5.2 1.3 3 23 1296 1317 1295 1317 0.92

16 19 5.9e-06 0.00051 20.3 1.3 1 23 1321 1343 1321 1343 0.98

17 19 0.88 75 4.0 5.4 1 23 1348 1370 1348 1370 0.98

18 19 3.5e-07 3e-05 24.1 0.5 1 23 1376 1398 1376 1398 0.98

19 19 0.0013 0.11 12.9 1.3 1 21 1403 1423 1403 1424 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.13	11	6.7	3.8	1	23	416	438	416	438	0.98
2	19	0.00015	0.013	15.9	0.8	2	19	474	491	473	495	0.90
3	19	0.0033	0.28	11.6	5.3	1	23	501	523	501	523	0.98
4	19	0.001	0.088	13.2	0.1	3	23	531	552	529	552	0.92
5	19	5.9	5.1e+02	1.4	1.1	1	23	559	582	559	582	0.96
6	19	4.1e-05	0.0035	17.7	0.7	1	23	586	608	586	608	0.97
7	19	0.0018	0.16	12.4	0.5	1	23	614	636	614	636	0.98
8	19	3.2e-05	0.0027	18.0	2.0	1	23	642	664	642	664	0.97
9	19	0.001	0.09	13.2	0.1	1	17	669	685	669	686	0.92
10	19	2	1.7e+02	2.9	0.7	3	20	1154	1171	1152	1174	0.91
11	19	7.7	6.6e+02	1.0	2.1	1	23	1180	1203	1180	1203	0.96
12	19	0.00016	0.014	15.8	0.8	1	23	1209	1231	1209	1231	0.98
13	19	0.76	65	4.2	0.8	1	23	1237	1259	1237	1259	0.97
14	19	4.8e-05	0.0041	17.4	0.8	2	23	1266	1287	1265	1287	0.95
15	19	0.37	32	5.2	1.3	3	23	1296	1317	1295	1317	0.92
16	19	5.9e-06	0.00051	20.3	1.3	1	23	1321	1343	1321	1343	0.98
17	19	0.88	75	4.0	5.4	1	23	1348	1370	1348	1370	0.98
18	19	3.5e-07	3e-05	24.1	0.5	1	23	1376	1398	1376	1398	0.98
19	19	0.0013	0.11	12.9	1.3	1	21	1403	1423	1403	1424	0.92

Sequence Information

Coding Sequence: ATGGAGATGAAGCTAGAAGAGGCGCAGATCTGCAGGCTGTGCGGTGAATGCGAGAGTATATACATCGATGTTTTTGGCGAGGAAGGCACAAAGAGATTTCTCGGAGTCAAGATTCACACGAAAATCAACATTTTGATTGATGAAACGGACCCTCTGCCTAAGGCGATCTGTGTACAGTGTCTGGGTAAGCTCGAATTCGTTTGTGACTTTCAAGAGGAGTGTCTACGCACGCAACAAGTGTTGCGCGAACGATACAATCTGCCGCCGCTAACTGACGGTGATGAGCTAAAAATCGAGGATCCATCAATACCGGCGGGAACGTCGACGAACAACAATAGCACTGATAAAAATTTGAATCCTCCGTTGGATAATGAACCGGAGATAACGACACCGACGTATGAGAAATCGAGTCCTCCGACAGCGACGGAAAATCATCAAACAAAAGCAAAAAAAAAATTGCGAGCGCGTAGGAGATCGATATCGCAGAGCGAGAATGAAAAGCCAGAAAGCGAGCGTGAGAATGTTCGTGAGCCGAGTACAGAAAATGTCAACAAGCGTTGGTTGCGAAGTCGAAATTcgacagcggcatcaacggcgacgacgacgacaacaacgacgacaaattcgacatcaggaacgttgacgagtgtagattgtgcgaaaacagtgACAGCTTCGATAGCTCGTAGATTACGAAGTCAAAATGATTCGTTAGACAAGAGCAAAGATGTTTTGGAAAATACGACCAAAGATTCAACGAGTCCAAGTTCAAAGCCGTTGGGCGACGAATCAATGATTCAAATTCCAACTTCGGCATTGAACAAAGTTCTAACCGTAGTTTCTTCGTCCCCGGACATGGAAGTTTCAGTGAAAGAGTCGACCAATCGTCAGGGTGACATAGAAGACATAAGCTTCACACTGGAACTTCGGCGTAAAAAACAAGACACGGAATTCGTAACGGTCCTTGCCAAAGTTTTTCCCGATCAAGGCTCTTGTCTCGTTGGTTCTGGGATCGTGAATCTCTTGGAGAATGAAAACAACGTCGAGGTCGATAAAATCGTAAGCACGATTATAAATGGCTCGTCGAAACGAAAAAGCATTAATAGCGGAGTTACGAAAATTGACGAGCTCGAAGAAATGGAAAAAAGATTGTCAACAACGCAAAATCCCGAGGAATTATTTCGTGTTGATGGCGAAGAAATTCGGGTTGATGATAATATCGAATACGTCGATAGTCAAAACGGTTATGCTTGTAAATTGTGCCGTAAAATGTACGAACGACGAGACAAATGTACGGTACACGTGAAAACTCATCTTGGCATAAAACAATACGCTTGTACTCTATGCTGTGCCAAATTCGTTTGTAAATCTGACGTTATGAAGCACATTAGATGTTCGCATACAAATCCACGACCTATGCAATGTCCCAAGTGCCCGAAACGCTTCAGATCTAAATTCGATCTGACCGAGCACGACAACGTTCACAAAGGCGTTAAACCTTATCGTTGTAGCGATTGTTCACAAAGTTATCACCACAAAGTTTCGTTGCAAATGCACGTTAAATCTCATCAACCTCCACAAAATTTAGCCTGCGAATATTGCGGCAAAGTTTTCCCATTTCGTACACGTCTACTTTCCCACATCGGCAGCGTTCATTTGAAAAATCGTCGCAATTTTCGATGTCGTTTTTGTTACAATTTGTACTCGAGTCTAGCTGTTCTTAATGATCACGTTAAATCTCGTCACGCGACAACTTATACTTGCGAAATATGCTCGAAAACTTTCAAGGTCGCCTCCAAATACAAAGCCCATGTTTTACAACATTCCAATCCAAAGCCTTTTGTCTGCAACGTTTGTAATAATCGTTACGCCTCCAAAGCCTTTCTCAATGAACATCTACTCAAACACGAGGGCCTCCGGAAACATGTCTGCCAAAAATGTGGCGCCAGTTTTGCCCAAGCCAGCCATTTGGCTGCTCATCGTCATGTCCATGGCGAAAAAATTCACGTTTGTCCAGAATGCGGAAGAAAATTTAACCGACGGGACAATATGAAAATAAGCGAAAACGATGGATTATCGCACAATATCTGCATCAAATGTCTCGGAACTCTGGAATTTCTGTGTGACTTTCACGAGCAATGTCACAATACTCAGAAAAAATTGGCAATCGCAAAGAAGGCCGAGAATAGTAAAGAAGTCGTACCTGAGCCATCGAATCCACCGCCGTTCGAGGTGGATTTCGACAAGGAAAACGCCGCGCCGATTATGAGGTCTAACATTAAAAGGAAAAAATCTACTAACCCGGAAACGCCAAAGAATGAAGCAGTTGCTAATAATGTAGAAAGCAAACGTGTTAAGGTTAACGTTCAAGAACCCAAGAAGTCACAAGCTGAGGCAAAAGTTAATAAAAATGAGAAAGAAAACATGAATACAACGAAGGAGACAAAAAAGAATGAAAATGAAGCAACAAAAGTGAATAAAAATGGAGAAAACAACACGAAAAAAAATAATGACAAGAAAATAAAAGATATCGAAGAGACAAATATCAATAATCAAGAAGGAATAATCAATAAAAATGTTGAAGCGAAGATGAATAAATTGGTGGAGAAAAATCTCAATAAAATCGAGGTTTCGAAAGAGACCAATAATTCAAACAAAACTTCATCTCCTTCGGCTAAATCAAATGAGTCAAAATACTCAATGAAAATGGAAACAGGATTGACAACTTCTCCGAGAGAGAATAAGAAAATAACGGATTGGTTATTGAACAAATTCTCTCGCCAAGAGGCGCCAAATTCCATGGATCCAAAATGTGATAAAACTGCTAAGAAAATTAGCGTAATTAATACGAAAGGAACGTTATCGGATAACGAACCAATAGAGGTGATAGTGAAGGTTGAGAATGATGAAAACATGAGCGAGGCTGTGATTCCAAAAAACAAATTATTGAGTAAAAATAAAATCGTATGGATACCGAATATGATAAAGTTACCGGATGTTTCGATTCCGAAATCAGCGAGAATGGAAACATTGCACGGGGATTCCCCGCCTAGGGGAGATGAGGCTGAAACGCAAAATATTTCTTGCGGTGATGAGAAAAATGTACAGAAAAAGAAAGAAGGAGCTTCAATGGAAGTGGCAAGAAAGAGTGTGATCGAAATAAATGATACGAGAATGGAGGACGGTCGGAGTAAACGAAGTGACTCAAAAATTGAAACAAAAAAATCAAGCGTGGTTGAATCAGAAGAAAATGCAGAAGAACCCACGGATGAATCGGACGAATCTGACGAATCGGACGAAGATGGAAACGTAAAAACGCGAAAATTCGGTAAAATCATGGATCTTATAACCGAGGAACAAAAAGAAGCAATCGAGAAATTTTACATATGCAATATGTCGGTTGTCAATGAAAAAATCGTTGGGGAACATATCATTTTTCTTGATCGAAAAAAATTCGGCTGCAAACTCTGCGATGCTTCTTACGTTCGACAAGATAAATGCCAAGTTCACATTTGGGCACATCTTGACATGAAACCCTATCGATGTAACGCTTGCGAATTTTCCACCGTTACTGTCAGCAATATTCGCTGCCATGTGAGAAAAAGTCATCTTAAAATCAAACCGTACGCGTGCGAGATTTGCGAGAAACGTTACGTCACTTCTTTTCTTCTTGAAGAACACTTGCACACACATACTGGATCGAGGCCTTATAGCTGCGACGTGTGCGAATTCACCAGCGCTAGCAGACAGGTCCTCAGTTATCATAAAACGACCCACAAAACTGTAAAGGACGTAACTTGTAACGATTGTGGCAAAAAATTTTTTTCAAAGAGTCGTTTGCGAGCACATTCGATTATCCACAAAAAGGACAAGGCCGCGAACATGTGCAAATTCTGCTCAATTTATCTGTGCAATAGCGAGGCGCTCCAAAAACATTATGCAAATGTACACAATAAGGATTACATATGCGATGAATGCGGAAAAATATGCAAATCGAAGAAAGCTTTGAATAATCATCAGAACGTGCATTCACCTGCAAAGTATAAGTGCACTCTGTGCTCGAACGTCTATAAAAGCAGCCATATACTTAAAGAGCATCATTTGAAACACGAGGGTATAAGAAAGTACAAATGCAATGTTTGCCAAAAGGATTTTGCTCAACAGTCTCATCTCGCAGCTCACATGGCAGTCCACAGCGACAAGAGATTTTTGTGTCCTGGATGCAAACGTCCTTTCAATCGTCATGACAACATGAAAATGCACACAAAACGATGCGGGGCCTTTCTCGCAAATCCAGAGCTGGCGACTCTTTTATCAACTCGAAGAAGCCAAAGTCAGAGCCTTAAGAAAAATACGGAGAAGGTGGCTCCAGTAGAAACAGTAGTATCATCGATCGAGGCGGTTTATACGAAGACTGATATTCGCATGAACGAGGAGAGAGAGATTGTAAAAGATGTGCCAAAAACGAGGGATGAGTACCGCGAAGAATTTACTACGATCGTCGTCGAGAGCACGATTCCATGTACCTGA
Protein Sequence: MEMKLEEAQICRLCGECESIYIDVFGEEGTKRFLGVKIHTKINILIDETDPLPKAICVQCLGKLEFVCDFQEECLRTQQVLRERYNLPPLTDGDELKIEDPSIPAGTSTNNNSTDKNLNPPLDNEPEITTPTYEKSSPPTATENHQTKAKKKLRARRRSISQSENEKPESERENVREPSTENVNKRWLRSRNSTAASTATTTTTTTTNSTSGTLTSVDCAKTVTASIARRLRSQNDSLDKSKDVLENTTKDSTSPSSKPLGDESMIQIPTSALNKVLTVVSSSPDMEVSVKESTNRQGDIEDISFTLELRRKKQDTEFVTVLAKVFPDQGSCLVGSGIVNLLENENNVEVDKIVSTIINGSSKRKSINSGVTKIDELEEMEKRLSTTQNPEELFRVDGEEIRVDDNIEYVDSQNGYACKLCRKMYERRDKCTVHVKTHLGIKQYACTLCCAKFVCKSDVMKHIRCSHTNPRPMQCPKCPKRFRSKFDLTEHDNVHKGVKPYRCSDCSQSYHHKVSLQMHVKSHQPPQNLACEYCGKVFPFRTRLLSHIGSVHLKNRRNFRCRFCYNLYSSLAVLNDHVKSRHATTYTCEICSKTFKVASKYKAHVLQHSNPKPFVCNVCNNRYASKAFLNEHLLKHEGLRKHVCQKCGASFAQASHLAAHRHVHGEKIHVCPECGRKFNRRDNMKISENDGLSHNICIKCLGTLEFLCDFHEQCHNTQKKLAIAKKAENSKEVVPEPSNPPPFEVDFDKENAAPIMRSNIKRKKSTNPETPKNEAVANNVESKRVKVNVQEPKKSQAEAKVNKNEKENMNTTKETKKNENEATKVNKNGENNTKKNNDKKIKDIEETNINNQEGIINKNVEAKMNKLVEKNLNKIEVSKETNNSNKTSSPSAKSNESKYSMKMETGLTTSPRENKKITDWLLNKFSRQEAPNSMDPKCDKTAKKISVINTKGTLSDNEPIEVIVKVENDENMSEAVIPKNKLLSKNKIVWIPNMIKLPDVSIPKSARMETLHGDSPPRGDEAETQNISCGDEKNVQKKKEGASMEVARKSVIEINDTRMEDGRSKRSDSKIETKKSSVVESEENAEEPTDESDESDESDEDGNVKTRKFGKIMDLITEEQKEAIEKFYICNMSVVNEKIVGEHIIFLDRKKFGCKLCDASYVRQDKCQVHIWAHLDMKPYRCNACEFSTVTVSNIRCHVRKSHLKIKPYACEICEKRYVTSFLLEEHLHTHTGSRPYSCDVCEFTSASRQVLSYHKTTHKTVKDVTCNDCGKKFFSKSRLRAHSIIHKKDKAANMCKFCSIYLCNSEALQKHYANVHNKDYICDECGKICKSKKALNNHQNVHSPAKYKCTLCSNVYKSSHILKEHHLKHEGIRKYKCNVCQKDFAQQSHLAAHMAVHSDKRFLCPGCKRPFNRHDNMKMHTKRCGAFLANPELATLLSTRRSQSQSLKKNTEKVAPVETVVSSIEAVYTKTDIRMNEEREIVKDVPKTRDEYREEFTTIVVESTIPCT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -