Ccec025778.1
Basic Information
- Insect
- Calycopis cecrops
- Gene Symbol
- -
- Assembly
- GCA_001625245.1
- Location
- LUGF01046601.1:185338-197817[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 1.4e-06 0.00016 23.0 0.6 1 23 189 211 189 211 0.99 2 32 0.0025 0.29 12.7 0.9 2 21 276 295 275 296 0.92 3 32 0.00013 0.015 16.7 0.1 2 23 322 344 321 344 0.96 4 32 1.1 1.3e+02 4.4 0.0 2 22 362 382 361 382 0.92 5 32 9e-05 0.01 17.3 0.9 1 23 392 414 392 414 0.98 6 32 0.012 1.4 10.5 0.3 1 23 434 456 434 456 0.98 7 32 0.00013 0.015 16.7 1.2 2 23 496 518 495 518 0.95 8 32 0.00031 0.037 15.6 1.9 2 23 564 586 564 586 0.97 9 32 0.00055 0.064 14.8 1.6 1 23 636 659 636 659 0.97 10 32 0.0066 0.77 11.4 0.8 2 23 716 737 715 737 0.96 11 32 0.00077 0.09 14.3 3.4 2 23 749 770 748 770 0.96 12 32 0.086 10 7.9 1.8 2 23 782 803 781 803 0.96 13 32 0.014 1.6 10.4 0.7 1 23 813 835 813 835 0.98 14 32 0.1 12 7.7 3.2 1 23 864 886 864 886 0.96 15 32 0.00017 0.02 16.4 2.0 1 23 897 919 897 919 0.98 16 32 0.0017 0.2 13.3 1.4 1 23 927 949 927 949 0.98 17 32 0.00069 0.08 14.5 0.2 2 23 969 991 968 991 0.97 18 32 0.6 70 5.2 1.5 1 23 1009 1031 1009 1031 0.96 19 32 0.1 12 7.6 3.7 1 23 1038 1060 1038 1060 0.97 20 32 0.0018 0.21 13.1 0.8 2 23 1071 1093 1070 1093 0.95 21 32 0.0031 0.37 12.4 0.2 2 23 1116 1137 1115 1137 0.95 22 32 0.2 23 6.8 1.0 2 20 1141 1159 1140 1160 0.93 23 32 3.6 4.1e+02 2.8 3.7 2 23 1180 1202 1179 1202 0.96 24 32 0.0024 0.28 12.8 0.2 2 23 1218 1239 1217 1239 0.95 25 32 2.9 3.4e+02 3.1 2.8 5 23 1249 1267 1246 1267 0.93 26 32 0.019 2.2 10.0 1.2 2 23 1278 1300 1277 1300 0.95 27 32 0.12 14 7.4 3.6 2 23 1317 1335 1317 1335 0.94 28 32 1.8 2e+02 3.8 2.2 2 23 1380 1401 1380 1401 0.96 29 32 0.61 71 5.2 2.5 2 23 1408 1429 1407 1429 0.95 30 32 0.0023 0.26 12.9 0.5 2 23 1440 1462 1439 1462 0.96 31 32 2.9 3.4e+02 3.1 0.8 2 23 1478 1496 1478 1496 0.78 32 32 3.3 3.8e+02 2.9 2.3 2 20 1500 1518 1499 1520 0.84
Sequence Information
- Coding Sequence
- ATGGCATTCAAGTTGGGAAAATGTAGGCTTTGCCTCAAACTTGGAGATTTTTGTTCCATCTTCACCATGGATAACAATATTCAGCTCGCCGAGATGGTTATGGAATGTGCTCGTGTAAAGATTTACGATGGCGATGGACTTCCGGATAAAATATGCAATGAATGCATTCAAAAGCTAAGTGGTGCTCACATATTTAAGAATCAATGTGAGCGTTCAGATCAAGAATTAAGGCGAAACTATGTGCCACCGCCagGTTTTAGTACAACACCACCGCCACCAAACAGACAAAGCAGCGATTCGGCATTTTCGTCGCACACTGAAGTATCCAAACCCTCTTCAGTGGAAAGAAAAATTACACCTAATGCTCGAAATCGTAAACGCAGTGCGGATAGTATTGATGAACCTCCCGTGAGCAGTCGAATCAATGATTACCGTCATGGTGTGACGAAACGCGTTGACGAATTGCGTACTACAAAGAAAAAAGCAAGATATACTTCTGATTCTGATTATGAAGACAACAGCGCATTCTATTCCGCTGAAACGGATTCTGACGATCTTCTAGAATACAAGTGTAAAGAATGTCCAAAGGCGTTTAGATCAAGCAAGAGCTTGTCAGCACATGTTAAGGTACACAGAAGAAAATCTCATCAACCTGAGAAAACAACCACAGAAGACTACTCTGCCCTTGATACTACCAAAGACTACTCTGCCCTTGATACTACCAGTAAAAGTGTTGACTTTCCTAAGAACAGTTCCATTGCGTCAAATTCTACATTTGACACATCGAACAACTTTGACGACGCATTGGACGTGGAGGATAAACTTAGCTGTGACAAATGTAGTAAAACATTCAAATTGAAGATAATGTTAAAACGTCATTATGAGACCTGTGGCAAAACGCCTCAAAAGATGCTTCAAGTGTCTTTAGAACCACTAGAATTGCCAGAATCCAATGAAAAGATCACTTGCGAAATGTGTAACGGAGAGTTTAAAACTATAGAAAATCTTGAGAAGCACATGAGAATTGTCCATGCAGCTGTGTTGAAAAAGAATAACGAAGACACAGTCACTGCAGTCACTGTTCCATGTTATTATTGTCAAGAGCCTTTTGACGAATTCGCTGCCTACAAAAGTCACATTGAAACATGTCCTAAGACGGAAGACGTGTTGACATTCGAGTGTCCTCTTTGCCAGAAACCGTTATCAAGAAAACATGCTTATAATGCGCATATTAAATCGCACTTTTTCCCAACCTCGCATACAAGGTTCCCCAATACTCCAAAAACTGAAACTAGAACTTACCAATGTCGCTTCTGCTCGCTTATCTTGTCTACGCAGGAGGAATTAATAATTCACTTATCTAAACATATGTCAAGTATTGATGATTCCAATGAAGGCGGGGACGAGGAATCAAGAGCGAGTACCATTGAAGATTCAGTGTCTGTGCATTCTGAATACAGCGGTGCCGCGCCAAATGGGACTTTAAACTGCGAGTATTGCAATAAACAGTTTACATACAAAAAGTCTTTATTGACACACATTGCTAAACTACATCAAAACGATGTGAAAATCAAAGATGAACCGCCCGATAAAAACGAATCTTTGAATTTGCTCAGTGAAACCGTTCAATCTAACAACACAGGCATGACTGACTCGGAGTCTAGTCAAGACGAAGGCGAGGACGATAACACGTGTGATATCTGCGAGAAGCAGTTCTCGTACCGCCGTCTCTTGATACAGCACAAGCGTACGAAACACAACATGTCGTCTGGTACTAAACGTGCCAAAATTAATTTGAAGGACTGCAACGTGAAGTGTCTAATTTGCGACATTGAGATGAAAGTGGGTGTCATCAATGAACACAATCAGACCCACACTTCTGCCAACATAAAGCCGCGGAATTTGTACACGTGTGTGCTCTGCTCCATGACGTTCAAGAGCTGCAGCAGCTTGGCGAGCCACATAAAGCTAGTCCACAGATTAAAACAACAAGCTCCAAAATTGGACAGGTCCAATCCAAATTTAGCGGATTTTTGTGAGGTCGTTGTGACGAAGGCGGAGCCCATGGATGAGGTCCAGGGTCACAACGGCTACAATGAGGCTACCGCCAGCAACACCGTACCACTGGTCAATATGAGTGGACTGACGTGCCATATTTGTAGCAAACAGTTGCCGACACTTATATCTCTCAAGAGACATGTCAATTGGCATAAGAATGTTGGCAACAACTTGGAAAAGAAAATGGAATGCTTCGTATGTAATGAGTCGTTCAAATTTCAGCGGCACTACAAGCTGCACATGCGCGAGCACTACACCGACACCAACCTCGACCCCAAGCACCTCACGTGCTCAATATGCAACCGCAAGAGCAAGCATCTGCGCGCCGCCCAGGCGCATATGAACTTCCACAAACAAACTCGCTTCAAGAACAAAGACTACGAGTGTTCCATTTGCAAACGCATCTTTCAATATAGAAAAGTGTACCTCTCGCATATGGCTGTTCACTTTAAAAAAGGCGACAGCGCCGTCAATACCGTGGTCGGGTCAGTTCTCCCGACTACGGCGGATAAGACCATCTTCGACGGGAAACACACGTGCCATCTGTGCGGAAATGTTTCCGACTCGGAAAACTCCTTGAAACACCATCTCATTTGGCACAAGTCGAAAACTGTCCTGTTTGGCGCGAGACACGAGTGCGACATCTGTACCATAGTGTTCACAAATAAGAGGAGATTGGAACTCCATTACAGAACTCACTTTGAGAATGATGATGGTCCCTACAAGTGTCACATTTGCGGCAAGGGATACATTGCGGAAGAGTTTTATAAGAAACACTTGAAAGGACACAACTTTGATAATCAGTCTCATAAAAAGCGAATCGAAAAACTTAGGAAGGATAAAGTGAAATGTCCCATTTGCTCACGATACTATCCTGATTTGGTGAAGCTTATTCGTCATTTACGACGCACTCATCCCGAGAGCAAAATGATAAAAGAGGACCCCGATGCCCCTGCACCCAGTTACTACTCATGTAAACTTTGTGCGAAGGTGTTCTTGGACGAAAGGAGGTTGCAACATCACGAAGAATCCCATTTGAGGAAGCCAGAGTttttcaaatgtaaattttgCGGCAAAAAAACTATATCGCTCAAGAATCATAGAGTTCACATTAAGGGCCATTTGACCCAAAAATATTTCGACAATCCTCTTAAGTGTCCGAACTGTGAGGAGACATTCAACAGGGGGTACGACTTGCACTATCATCTTCGCGATGTTCACAGCATTAACGAAACTTGGATCGCCGAACGCGGCACCGAAACTCTCAACGGCCCTTTAAAGGACCTGCAATGTTCTATTTGTTACAAGATTTTAGCCAGCAAAGGCAACTACGAGAGGCACATAGACTACCACAACACATTGCGCTGCAACTACTGCTTTGAATTCTTTACCACTCATAGATTTTTGGAAGGCCATCTTGCATTCAGTTGTGAGAAGAAGAAGCTATTGGGCGATACTGAAATTTATCCGAAAAAAGTAAAATGCGAGGTATGCTACAAAGCCTTCCATATACAAGTAAAATTGGATTGTCACATGAGAACCAAGCATGATATAAAAGTGTTTAAGGGAGAATATATCGGGAGGAAGGAGATCGTTTGCGATTATTGctttaaagtatttgaaaatgaGTACGCCTTGAGTACTCATAAAATTTATCATCGCACCGTTGGCTACTACGGCTGTATCTATTGCGCTAGAAAATTCAACACTCTAACCGcttacaaaaaacacaaaaaccacCATTTCTCGCAACTTAACGTTGACAACCCCACGAAATGTGAGCACTGTGACCAAACATTTGTCGCATTTAGAGAGATGATATATCACATGCGCGACGAGCACGGAGACGATAAAGAGTGGATCATACAGCCAAAGGAATCGATTGAAGAAAAATGTCCTATTTGCCAAAAGACTTTCTTCAATCTTCACAGACACATGGATTATCATGAAGAAAACAGGTGTAAAAAGTGTGGTGAATATTTCTATTCGACCATAGATTGCGATAATCATTTGTGTGCGATCGATAGCGATGATGAAACAGAAAATCCTAACGTGACGGACCTGCGTCCTAAATATGAGGAGTGCAGCTTCTGTTTCAAACCGACTACCAAAAAGAATTCCCAGAAAAAGCACGAGCTCATCCACAAGGGTTCGGGATCGATATCTTGTCGATTCTGTACTCACAAATTTAAAACCATAGACGCATTTAACATACACGCCTTCACGCATAGAAACAGAAAGTACAAATTGAAACCAATAAAATGTAAGAAATGCAACGAAGCGTTTGTGAAGTATGGGCCGTTTATAAAGCACATGAAAAATGTCCACAAAAGTGTCAAAAAACTTCACTACAGGGCGACAGTGATGGCGGAGCGGTGCGTCGTGTGCGGGGAAAATTTCCCCAACTTACACAATCACTACCGAGCGCATCTTCAGAACCAATGTCAGCAGTGCAATAAGTACTTCACCTCGACTCGTGTGTTCGATTTGCACCAGTGTGATAAAGAAGACTCGGACCCTACGAAAGTATTCACTTCTGATGCTGATTTGGTGAAACTTATCAATGAGTACGTTCCTAAAGATGAGAAGGACGATGAAAAGTACTACGGCGCTGACAACGAAGAAGAAGACGAGGTTGAGGAACCCAAAGAACAAACAAATGAACCGCGGGCCCAGAAACAACTGCAAGACAGCAAACTAATGTCAAGCCACAAACAATATCCAGGCCTCAAACAGTATCACGGCCCGAAACAGAAAACGAAGACCTCGGGCCAAATTTCACAAGACGACGAAAGCCAAACCTCCTTCGATCCCGACGAAGGTGAATTGCACGAGATGGTTCATGCGCCAATAATTTCAGACGTGTTATCTCTGTACCGCAAGAAAGAAGACAAGAAGAATAATAAGGAAGACGAAGAAAGCGATGTGGTTATTTTAACTGACGAAGATTCCAATGGTTTCGAAAAAGTAGTCCCTATTGTAGTAATAGATGATGATTAA
- Protein Sequence
- MAFKLGKCRLCLKLGDFCSIFTMDNNIQLAEMVMECARVKIYDGDGLPDKICNECIQKLSGAHIFKNQCERSDQELRRNYVPPPGFSTTPPPPNRQSSDSAFSSHTEVSKPSSVERKITPNARNRKRSADSIDEPPVSSRINDYRHGVTKRVDELRTTKKKARYTSDSDYEDNSAFYSAETDSDDLLEYKCKECPKAFRSSKSLSAHVKVHRRKSHQPEKTTTEDYSALDTTKDYSALDTTSKSVDFPKNSSIASNSTFDTSNNFDDALDVEDKLSCDKCSKTFKLKIMLKRHYETCGKTPQKMLQVSLEPLELPESNEKITCEMCNGEFKTIENLEKHMRIVHAAVLKKNNEDTVTAVTVPCYYCQEPFDEFAAYKSHIETCPKTEDVLTFECPLCQKPLSRKHAYNAHIKSHFFPTSHTRFPNTPKTETRTYQCRFCSLILSTQEELIIHLSKHMSSIDDSNEGGDEESRASTIEDSVSVHSEYSGAAPNGTLNCEYCNKQFTYKKSLLTHIAKLHQNDVKIKDEPPDKNESLNLLSETVQSNNTGMTDSESSQDEGEDDNTCDICEKQFSYRRLLIQHKRTKHNMSSGTKRAKINLKDCNVKCLICDIEMKVGVINEHNQTHTSANIKPRNLYTCVLCSMTFKSCSSLASHIKLVHRLKQQAPKLDRSNPNLADFCEVVVTKAEPMDEVQGHNGYNEATASNTVPLVNMSGLTCHICSKQLPTLISLKRHVNWHKNVGNNLEKKMECFVCNESFKFQRHYKLHMREHYTDTNLDPKHLTCSICNRKSKHLRAAQAHMNFHKQTRFKNKDYECSICKRIFQYRKVYLSHMAVHFKKGDSAVNTVVGSVLPTTADKTIFDGKHTCHLCGNVSDSENSLKHHLIWHKSKTVLFGARHECDICTIVFTNKRRLELHYRTHFENDDGPYKCHICGKGYIAEEFYKKHLKGHNFDNQSHKKRIEKLRKDKVKCPICSRYYPDLVKLIRHLRRTHPESKMIKEDPDAPAPSYYSCKLCAKVFLDERRLQHHEESHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYFDNPLKCPNCEETFNRGYDLHYHLRDVHSINETWIAERGTETLNGPLKDLQCSICYKILASKGNYERHIDYHNTLRCNYCFEFFTTHRFLEGHLAFSCEKKKLLGDTEIYPKKVKCEVCYKAFHIQVKLDCHMRTKHDIKVFKGEYIGRKEIVCDYCFKVFENEYALSTHKIYHRTVGYYGCIYCARKFNTLTAYKKHKNHHFSQLNVDNPTKCEHCDQTFVAFREMIYHMRDEHGDDKEWIIQPKESIEEKCPICQKTFFNLHRHMDYHEENRCKKCGEYFYSTIDCDNHLCAIDSDDETENPNVTDLRPKYEECSFCFKPTTKKNSQKKHELIHKGSGSISCRFCTHKFKTIDAFNIHAFTHRNRKYKLKPIKCKKCNEAFVKYGPFIKHMKNVHKSVKKLHYRATVMAERCVVCGENFPNLHNHYRAHLQNQCQQCNKYFTSTRVFDLHQCDKEDSDPTKVFTSDADLVKLINEYVPKDEKDDEKYYGADNEEEDEVEEPKEQTNEPRAQKQLQDSKLMSSHKQYPGLKQYHGPKQKTKTSGQISQDDESQTSFDPDEGELHEMVHAPIISDVLSLYRKKEDKKNNKEDEESDVVILTDEDSNGFEKVVPIVVIDDD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -