Ccec000960.1
Basic Information
- Insect
- Calycopis cecrops
- Gene Symbol
- CSRNP3
- Assembly
- GCA_001625245.1
- Location
- LUGF01001810.1:160220-162394[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.062 2.4e+03 -0.7 2.9 59 114 8 63 1 102 0.58 2 3 0.56 2.2e+04 -3.8 0.4 85 105 151 170 125 191 0.49 3 3 9.8e-103 3.8e-98 328.8 8.6 1 218 204 413 204 413 0.94
Sequence Information
- Coding Sequence
- ATGGAAAGGATTTCGTGCGACCGGGAAGACCTTAATGAGCTTAATTATACCAGTGATGAATCTTCTATAATAATGGAAACCAACAGAGAAGAAAGTTGTTCACCTGTGATAAAGAACGAGAAAAGTGACAGTGATGCTAATAGTGATAACATTAGTGATAATCAAAATGATGatcaaatttatgtaaataataatgtttctcAGTTTTATGAGAGTAGTGACAGTAAAATTGATTACGCCGTTAAATTAGATGATAATGACACTTTAAGTgatatagaagacattaaaacAGACACTGCTTCGGCAGACAGTGAAGATTCAGCACTTGGCAGTTTACCTCCTGATGTTATCTCACATGACAGAGAAGACGTGAACGACAGATCTGATGGCAGCGACTCCGGTACGGAGAcgacaaaatttataaaactaaccTACTTTGATAACACTGCTAAAGCAGAAGATAAAAAGCCTCCTGATCAGGAAGACAAACAAGATGAAATCAAAAACAACGAGGCCTCAAAAAACCCAGTCGTAGAAACCATAAGACCCCAAAGAAGCAGCCTAAAAAGAAAATGTGAGGACGACAAAAGCTGTGAACTTCAACCAAAAAAGAGGaaaggaaatattaaatttgacaaCGTAACTGTATACTATTTTCCTAGATCTCAGGGTTTTACATGTGTACCGTCACAAGGCGGCTCTACGTTAGGAATGGAGTGGGAGCATAGTCACagtcaaaaatttacattgacGGAACATGCTTTAGAACAAAGAAGATTGCACAGACAAATATTACAGCAACTGAAGAATGAGCGACATTCCAGTCAAGGTGAGTCACAATCTTCTAGCGAAGAGAGTGACACTGAAGAAGAAACCAGCGACATTTCAGAATCAGAGCTAGATTTAGATAGCTACTATTTTCTGCAGCCTGTACCAACTAGACAAAGAAGAGCTCTTTTACGTGCTGCAGGGTTAAGAAAAATTGAAGGTTACGAAAAAGACGAATGTAGAGATATTAGAACATCTCGTGAATTTTGTGGTTGTGCTTGTAAAGGCGTTTGCAATCCAGAAAACTGTTCTTGTAGTTTGGCGGGCATAAAATGCCAAGTGGACAGGCTGAACTTTCCATGTGGTTGTACAAGAGATGGGTGTGGTAATACTACCGGTAGGATAGAGTTTAATCCCTTAAGAGTAAGGACTCACTTCATCAATACTTTAATGAGAATAAGTTTGGAAAAGAAAAATGAAGAACAGCAAGAAGCTAAAAGACAGTGGGCTGAAGCACACAATACAAATGCTACAGCTGCTTGTATGCCAAATATAAGTATGCCATATGATAAAACAGTTTGCCATAATCAGGACATCAATACTTTAAGAGACGTCAATACCGGTTTGCCTATTAAAAGTTGTACTAGCAACTCTAATACCTATAATAAGATTCTCTGTAATCAACACAATGCTAATATTTCTGGTAGCGTTCATAACGAGGTCTCGTTTAATTTTCAAAGAAGAGACCAAAGCGTGATAAACTATGACGGTAAAACGGACAACAGATCGCACGATCCGTACAACTCAAATGTTATTCAAGGAAAAGGTCCCCCTTATCCTTCTACCAGCACAGCCGAATATAACGCATTATCCAATAGTATACATAGGTACCAATGTGATctcaataattatatgtatgaaCAACACTCAGAGAACCACCAATATAAAGGAATACAATCATTTTCGGCGTCTAGTTTTGAAGAATTCGCACACAATTCACAAATATCTATGTTCAACCACTATGGCCATATGTATATGCCAGACTACGTTCACAAACAAAACGGCAACATGCCAGAGCACAACGCACAATATTCTATGCCCCAGAACCATTATGATGTATACAGAAATAATGTAGAATGTTACAgtagtgaaaataaaattgattctcAGTACACCACGTTAATGGCGATgccttatcaaaataataaattgcaaGCTTTAGAAAGTGACGAGAACTGGTTTTGTCACAATAAGTTGCTAAATTTAGATAACGCAGACCAAGTAGCACAAGACGCACCACATCCCCAAGCTGATGCAACTCAAAAGACCACTGaagaaaatgtaaatgaaacTGAGAACTTAGGagaactaattaaaaaaactatggtAGAATCTGTCGCTGTTTAG
- Protein Sequence
- MERISCDREDLNELNYTSDESSIIMETNREESCSPVIKNEKSDSDANSDNISDNQNDDQIYVNNNVSQFYESSDSKIDYAVKLDDNDTLSDIEDIKTDTASADSEDSALGSLPPDVISHDREDVNDRSDGSDSGTETTKFIKLTYFDNTAKAEDKKPPDQEDKQDEIKNNEASKNPVVETIRPQRSSLKRKCEDDKSCELQPKKRKGNIKFDNVTVYYFPRSQGFTCVPSQGGSTLGMEWEHSHSQKFTLTEHALEQRRLHRQILQQLKNERHSSQGESQSSSEESDTEEETSDISESELDLDSYYFLQPVPTRQRRALLRAAGLRKIEGYEKDECRDIRTSREFCGCACKGVCNPENCSCSLAGIKCQVDRLNFPCGCTRDGCGNTTGRIEFNPLRVRTHFINTLMRISLEKKNEEQQEAKRQWAEAHNTNATAACMPNISMPYDKTVCHNQDINTLRDVNTGLPIKSCTSNSNTYNKILCNQHNANISGSVHNEVSFNFQRRDQSVINYDGKTDNRSHDPYNSNVIQGKGPPYPSTSTAEYNALSNSIHRYQCDLNNYMYEQHSENHQYKGIQSFSASSFEEFAHNSQISMFNHYGHMYMPDYVHKQNGNMPEHNAQYSMPQNHYDVYRNNVECYSSENKIDSQYTTLMAMPYQNNKLQALESDENWFCHNKLLNLDNADQVAQDAPHPQADATQKTTEENVNETENLGELIKKTMVESVAV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00687885;
- 90% Identity
- -
- 80% Identity
- -