Basic Information

Gene Symbol
RERE
Assembly
GCA_001625245.1
Location
LUGF01002310.1:20539-26013[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-08 2.5e-05 25.3 0.4 2 45 125 169 124 170 0.94

Sequence Information

Coding Sequence
ATGGCACAGAATCAAGGGGAGATTCAAGTGACACCAAACCAAACAGTGAAGGATAAGGATATTTACGCTTGTTTACCCGATATTCGCACCAATGGGCCTCTAGGTCCGGATGAGCCGTGCCCTGGTGGTGAGGAATTACGATGGTTGCCAGAGCAAGCTACAAACAGAGACTTGGTTATGTACCTTCGTGCTGCGCGTTCTATGGCAGCGTTTGCTGACATGTGTGACGGGGGATCACCCGACGATGGTTGTGTTGCTGCCAGTCGGGACGATACCACTATTAATGCTCTTGATGTATTTCACGACTCTGGCTATGACCCCGGTCGAGCACTTCAAGCGTTAGTGAAATGTCCAGTTCCTAAAGGAATTGAAAAGAAATGGTCAGAGGAAGAGACAAAACGATTTGTCAAAGGAATCCGACAGTTtggtaagaatttttttaagattCGAAAAGACTTATTACCGCATAAAGATACATCAGAGTTAgttgagttttattatttgtggaAAAAGACACCTGGTGCAAGTAGTAACAGACCTCATAGAAGGAGACGTCAGGCATCACTTAGGCGAGTTCGCAACACCAGAAATTCTCGTGCAGGTACACCTAAGGAACAAACTCCTGAAGCAACACCAACAGTGCCAGAAAGTAATGGATCCAGGCCTTCACCTAATCCCAAAGAAGGTGGTGAAATGAGTTCCGTTACCGAGGATGAAAATTCAGAAGatgatagtgattcaagagatgCTGGAGATCTATCAAAACCGGACAATGGTAGAATTGAAAATCCTGACGACTCACCCAGCAGAATGAGAACGAGAAATAAATCTAAAGAACAAACAACACCAAGCATCAAGACCAAAACACAAGATGAAAGTGATGGTGATACAAAAGCAAAGAAACCTAATAAGCTTATTGCACaaagtacaaataataatattacagagAAAGTTCTTTCATCTCCTGTAAGTAGTAGTAAAGATAGTAAGAAGAAAGTTGCTAATGGCAAAGTTGATGTATCAAAAGTTAAGAAACGTCTTCCAGATGATAGTAAACTTGAAGGAATCATGGATGGTGATGTGCAAATGAAAAAGTGCAGACCCGATGATCCAGCTGAGAGTCCTTCAGAGAGCTTGACTAATGATAGCTTTCCAGCAATGGATGACACTGAACCAGCAGAACCAGAAAGTGAAGTTTGTGATTTTAGCTTTAACAAACCCGATAAAGAGATGGAGCAAAACAAAGACATTGAAAGTGAACTATCTAATAAGACATCAGAGCCTTTAATAAAGAGTGAGATAATGGAGCCACAGATCAAAATGGAAAAAGATCCATTGCCACCTCTATTCAAAGTTGCACCTGAAAATGAAGATAGAGGTGCCCTAGATCTTAAGACTGATTCAAGTACGTCTAAAACATTTGAGTGTGCTGAGCCTAGACCGCTGTCTGTATTTTCGAAAGCTGAACTTATTATTCCTAAAGTAACACCTCTAAGTGCAGAAGctatagaaaaaattaaaataaaagaagaaatagaCACAGACGAGCCATCTTTAAATTTACAGAAAGAAGATTTTCAGAAAGATCCATTATCTCACAATTTCTCTGGTCACAGTTTAAGTCAATCCAGTAAACcacttaatttagaaaatacaaatttctttattaaagacaatcataatatgtttaatcCTAAACTTactcataatattaaaatagaaggagtttcaaacaatattttcaatCCCGCAAATATGACTAAGGACAGTTCTATTATAAGAAGCACTAAAGATTTTCCTTCAAGTATGGCATTCTCTTATCCATCGAGTATCAACTTTGCAAGTGATCCTAGTAAACATAATCCTCACTTAAATCCTTTGAAAACAGTTATTAAATTAGAACCCAGAGATGAAGCCAGTGAAATGAAGAATCAAAATACACCTGAAGTTTTCACTGCAACTATATCAGGATCTAATAAAGTGGACTCTCCAAATGCACCCAGGTTGGACCCATTACAAAGGATAAGTCCCTCTCCTACAAATGCAAGAGTGGCCTCTCCACCCCATATGGAACACCCTGCGGTTACTAATATAGAACCAGTTTCTCCTGCTACAGCTCCAGAAATGAAACCTCAAGAACCTGATAATGAAGACAAACAACCAACTGATTTGAAAACACAGCCTTCACCGAAACTTGATAATTCAAATGGAAGCTTAAGACCTCCAATATTTCCTTCACCTATACGTCCTGAGAACCTTGGAATTAGACCATCTGAAACATCAGCAATTCCTGTATCAGGACAGACTATGCCACCTCCGGCACTTACCCAACCTTCCATAACAGGATTGTTACCTCCAGGACCGTTATTATCTGTTGGTAGTGGATCAAATGTTGGCCCCTATGGCTTCATGCCAACATCTCTATATGCCCATTCCGGCCATCCAGGTCTAGAAAAGCCAGGTTCTATGCCTCCATTAATGCAAATGCCTTCAGGACATAGTCTAGCAGGATCTAGTTTAATATCCCAGCAGGCAAATCAAGCAGATCCTTCAATGCCACAAGacctaaaaattaaacaagaaattcCTGATAATATGCCTGCTAATTTATCAACACAAAGCGTAACGGATCCTCTGCAGTCACTGAAAGAGGTTAAAGTACCTGGTTACCCCATAGGAAGCTCAATAGCACAGCACTTAAGTTCAGAACGTGATAGAGAATCTCTACCAAGTGCTGAAAATTCTGCCCGGCCTCCAAGCCAACCACAAACAGAAAATACAAACATGCCAAGTGCTTTCCTAGGGCCGAGGATTGAAAGTATAAAGAAAGAACCTGATTTCTTACACCAACCTCACATTACTCCGGTGTCGACAAGTCAGAGTAATATTTCAGAACCAAGTAATGCTATCCCACCAGTAAAGAGCCCCCATACACCAACACCAACAAAAAGCCAAGGTCATAATGGAACTGGTCACCCACGTCCGTCAGCTACAACCTCACCTTTCTCGAGGCACTTGACCAGTCCTTCTCAATCTAGGCAGATTTCAGCTTCGCCTACTCACCATAATCCTCCGACATCACATTCAGCGTTGAATTTAATGAACCCTAGTCCTCTGACAATACCAGCTACAATTCCAGGACCTGTAATGCATTCTGGTCAACAACCTGGACATCCACATCCATTTGCGTCACCGCTTCATCATCCACATCATCCTTTATTACATCCTTCGTCTATATTTCAACTTTCTGCTGCTGCAGCAGCGCATGCAATGCATCCGTACTATGGTCATCCACATCCTGGCTACTCAATGCCATATCCATATCCATATGGACCATTACCTCAACCGCACCCTATACCTCCGATGCATCCATCAGCTAGTGCGGCAGGCAGACATGATCCGGTTAAACCATCAACTATTGAATCTACAACTATGCTGAGTGCGCACCACAGTACTAGTTCTTCGGTAACAACTAGATCACTACGAGAAATTTCGGAAAGTTCTGATGATCCTAGAAACCCTAATGCTTCTGAGAGACATCAATTACATGAAACGACTATGACTCACCATCATTCGACGAGTCATCACAGTGCAGTTCATACTAGTACAGAAAAGCAACCAAGCCATGCTGGAGGTGGCACTAATCATACTCTTTCGATATCCCACTCGACCTCAAGTAGTTCTTCGCAATCTATTCAGCACAAAATTAATACGCAACAAAAAAGTAGCTCTCATTCAAGCTCTCCTCTACATTTATCGGCGAGTGTGTCGCAGACAACTAGTACATCTGCTAGTGTAAATGTGACGAATAATCACACCCATCATCACTCTCATCACCTTGCTCACCACCCCGAAAGGTTATCTCCAGCTGATTCGATGCTACTTCGTCATCACCCTAAAATGCTTCCTGGCAATCCCAATCACCTTATGATTCAACCGCCTTCTATGGGTCATCCAATGGGTCTCGGATTACCGCCTGGCCCCGGACCAAGTTCTATTGAAAGTTTGCGTTTGCATGCCCAAGCAGCCGCAGGTTTGCAAGCTTCCCATGCTCGCTCTAATTCTCCTCACCAAATGTCTCATGGTCACCCCCACTTACGCGGTCCTCCTCGACCACATCCCGAGGAAAATCCAGAATTAAAGTTAGAGACACAGTCTCAAcccgaagaagaagaaattcCTAGCCCAGCACACATACCACACGGACCAAGTCCGGAACCGAAGATAGAAGACACAGAATGTCACAGATCTCAATCAGCTATATTTTTGCGACACTGGAATAGAGGTGATTATAACTCTTGTACTAGAACTGATCTTATATTTAAACCAGTGCCCGAGTCGAAACTTGCTAGAAAAAGAGAAGAGAGACTCAGAAAACAAGCAGAGCGTGACAGAGAAGAAAGAGAAAAGATTGCGCAGCAAGCTCATAGAAAGATTGCAACACCTGAAAAACCAGAAACGAAACCTCCGTCGCGAGGTGCAATTGAAACTATAACATCGCCTTATGACAGATTTCCACGCCCGCCCGGATATCCGGATACGCCGGCACTGCGACAATTATCAGAATATGCCAGGCCACACGCTGGCTTTAGTCCTGGCAACATACCCCGACATTGTATGGATCCTATGCTACAATATCAATTAAGTTCAATGTATGGTGCAGCCGGTGCCAGGGAGCGACTGGAACTCGAGCATCTTGAAAGAGAGAAAAGAGATAGAGAAATAAGAGAGCTCCGTGAGCGCGAGCTTAATGACAGATTAAAAGAGGAACTGCTTAAAAATAATGTGGGCCCTCGTGCCTTAGACCCACATTGGCTGGAAATGCATAGAAGGTATGGAATGCCTCCGCCCCCTCCGCAGGGTGCTATACCAGTTCAATTCGGATTGTATCCCCCAGGACATGGACCCGGTGCTTTATCTCAATTGGATCGCGAGCGCTTAGAAAGGTTAGGAATACCGCCCGGAGGAGGCGGTGGCCCTCCGCAGGCAGTACCTGTAACGGGGGCTCCGCCCCATCACCCGCATCATCCTCACCCAGGAGTCGCCGCCGCTCAACTGGAGGCGGCCGAAAGACTAGCACTAGCGGCTGACCCCATGGTGCGTTTACAAATGGCGGGTATAAATCCAGAATACCACGcgcacacacacgcgcacactCACGCTCACTCCCACACACACCTGCACCTCCATCCGGGGCAACAGGCGGCGCAGGCACAACAGGACGCCCTGGGACTGAGTCTCGGAGCGGGCGGGCCGTACAGGCCACTGCCCCACCCTGACCTGCTTGGAAGGCCGTACGCCGAGCAGTTGGCGCAACAGGCGGCCGCGCACGAGCAACTGCAGAGGCAGTTGCTGCTCGAACGAGAGCGTGGCTTCCTGCACCCGGCACACCACGAAGATTTCCTAAGGCAACAGCGCGAACGGGAGTTGAAGGTCAGGGCGCTGGAGGAGGCGGCGCGCGCGTCGCGACCTTAG
Protein Sequence
MAQNQGEIQVTPNQTVKDKDIYACLPDIRTNGPLGPDEPCPGGEELRWLPEQATNRDLVMYLRAARSMAAFADMCDGGSPDDGCVAASRDDTTINALDVFHDSGYDPGRALQALVKCPVPKGIEKKWSEEETKRFVKGIRQFGKNFFKIRKDLLPHKDTSELVEFYYLWKKTPGASSNRPHRRRRQASLRRVRNTRNSRAGTPKEQTPEATPTVPESNGSRPSPNPKEGGEMSSVTEDENSEDDSDSRDAGDLSKPDNGRIENPDDSPSRMRTRNKSKEQTTPSIKTKTQDESDGDTKAKKPNKLIAQSTNNNITEKVLSSPVSSSKDSKKKVANGKVDVSKVKKRLPDDSKLEGIMDGDVQMKKCRPDDPAESPSESLTNDSFPAMDDTEPAEPESEVCDFSFNKPDKEMEQNKDIESELSNKTSEPLIKSEIMEPQIKMEKDPLPPLFKVAPENEDRGALDLKTDSSTSKTFECAEPRPLSVFSKAELIIPKVTPLSAEAIEKIKIKEEIDTDEPSLNLQKEDFQKDPLSHNFSGHSLSQSSKPLNLENTNFFIKDNHNMFNPKLTHNIKIEGVSNNIFNPANMTKDSSIIRSTKDFPSSMAFSYPSSINFASDPSKHNPHLNPLKTVIKLEPRDEASEMKNQNTPEVFTATISGSNKVDSPNAPRLDPLQRISPSPTNARVASPPHMEHPAVTNIEPVSPATAPEMKPQEPDNEDKQPTDLKTQPSPKLDNSNGSLRPPIFPSPIRPENLGIRPSETSAIPVSGQTMPPPALTQPSITGLLPPGPLLSVGSGSNVGPYGFMPTSLYAHSGHPGLEKPGSMPPLMQMPSGHSLAGSSLISQQANQADPSMPQDLKIKQEIPDNMPANLSTQSVTDPLQSLKEVKVPGYPIGSSIAQHLSSERDRESLPSAENSARPPSQPQTENTNMPSAFLGPRIESIKKEPDFLHQPHITPVSTSQSNISEPSNAIPPVKSPHTPTPTKSQGHNGTGHPRPSATTSPFSRHLTSPSQSRQISASPTHHNPPTSHSALNLMNPSPLTIPATIPGPVMHSGQQPGHPHPFASPLHHPHHPLLHPSSIFQLSAAAAAHAMHPYYGHPHPGYSMPYPYPYGPLPQPHPIPPMHPSASAAGRHDPVKPSTIESTTMLSAHHSTSSSVTTRSLREISESSDDPRNPNASERHQLHETTMTHHHSTSHHSAVHTSTEKQPSHAGGGTNHTLSISHSTSSSSSQSIQHKINTQQKSSSHSSSPLHLSASVSQTTSTSASVNVTNNHTHHHSHHLAHHPERLSPADSMLLRHHPKMLPGNPNHLMIQPPSMGHPMGLGLPPGPGPSSIESLRLHAQAAAGLQASHARSNSPHQMSHGHPHLRGPPRPHPEENPELKLETQSQPEEEEIPSPAHIPHGPSPEPKIEDTECHRSQSAIFLRHWNRGDYNSCTRTDLIFKPVPESKLARKREERLRKQAERDREEREKIAQQAHRKIATPEKPETKPPSRGAIETITSPYDRFPRPPGYPDTPALRQLSEYARPHAGFSPGNIPRHCMDPMLQYQLSSMYGAAGARERLELEHLEREKRDREIRELRERELNDRLKEELLKNNVGPRALDPHWLEMHRRYGMPPPPPQGAIPVQFGLYPPGHGPGALSQLDRERLERLGIPPGGGGGPPQAVPVTGAPPHHPHHPHPGVAAAQLEAAERLALAADPMVRLQMAGINPEYHAHTHAHTHAHSHTHLHLHPGQQAAQAQQDALGLSLGAGGPYRPLPHPDLLGRPYAEQLAQQAAAHEQLQRQLLLERERGFLHPAHHEDFLRQQRERELKVRALEEAARASRP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00077442;
90% Identity
iTF_00288829;
80% Identity
-