Ccec035155.1
Basic Information
- Insect
- Calycopis cecrops
- Gene Symbol
- -
- Assembly
- GCA_001625245.1
- Location
- LUGF01059896.1:1211-1570[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-12 2.9e-09 37.5 0.1 2 40 15 53 14 58 0.90
Sequence Information
- Coding Sequence
- ATGGGGCGTTATGAAAGAACAACTGAAGGTCCTTCATGGTCCAGAGATACTTTAAATGAAGCAGTCGAAGCTGTTCGATCAGGTAGAATGTCTGGGTATGCAGCCGCATCAAGCTTTGGTATCCCAAGAAAAACTATTATGGACCATGTCACAGGTCGAAGGGGCCAAAAGTCATTAAGTCTAGGCAGACCACCAGTATTTAAATATGAGACAGAACAAACTATGGCAAAATGTTTGCATATAATGGAGAAAAATGGCTTCGGCTTGACTCGTACAGAATTTCTAGATATTGTTAAGGGATATGTCAAACAGATTGATCTAAAAACACCTTTCAACGATGGTActcctaatatattttag
- Protein Sequence
- MGRYERTTEGPSWSRDTLNEAVEAVRSGRMSGYAAASSFGIPRKTIMDHVTGRRGQKSLSLGRPPVFKYETEQTMAKCLHIMEKNGFGLTRTEFLDIVKGYVKQIDLKTPFNDGTPNIF*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00261774;
- 90% Identity
- iTF_00261774; iTF_00261775; iTF_01202401;
- 80% Identity
- -