Ccec001407.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Calycopis cecrops
Gene Symbol
ct
Assembly
GCA_001625245.1
Location
LUGF01002500.1:75894-105977[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.3e-27 6.8e-23 81.5 0.0 3 70 207 275 205 281 0.94
2 3 4.2e-32 5.4e-28 97.9 0.0 4 77 608 682 606 684 0.96
3 3 7.7e-31 9.9e-27 93.8 0.0 3 75 811 884 809 888 0.95

Sequence Information

Coding Sequence
ATGTGTATTGTCATTGTCTATTTGGCAGAGATAGCCCAGCTGGTCGAGGATGTGCGGAGACTCCAGGCATCGCTGTCAGCGCTGCAGGAAGCTCACGCGCAGCAGCTGCAGCGGCTGGAGGAGCGGCTGGACGAGAAGAAGCAGCATATAGCTCGTCTGGAGGCGAGGCTCGACACGCAGCGCGACTACGACGACATCAAGAGAGAGATCAGtttACTCAGATCTATGGACTTGGGGTCAAATGAAAGACTTGATCGGAAACCGGAACCCTTGAGATCACCTTCCGCGCCCGCCCTCCGTGAGGAGAGGGACTCCGCAGAACGAGAGCGAAGCACCGAGAGGCGAGACCCTGGTGCCGAGGAGTGGGCCAGCACTCCGCCGCCCCTCAACAACAACACCACCCACCACAACAACAACGGCCCGCTGCCGCTGCCGCTGCCGCCGCCCAGCCCCTACCGCTTCGAGGAGCACCGGCCCTACCGGTTCGCGGAGGACATGGGCCCGCTGCCGCCCGGCGCGCTCGTCGGACGACTCGGCGACTCCCTCATACCCAAAGGCGACCCGATGGAGGCGCGCTTGCAAGAGATGCTCCGATACAACATGGACAAATACGCCAACTCCAACCTGGACACGCTGCACATAAGTCGGAGGGTGCGCGAGCTGCTGTCCGTGCACAACATCGGCCAGAGGCTCTTCGCCAAGTACGTGCTGGGACTGTCCCAGGGAACGGTCTCGGAGCTGCTGTCCAAACCCAAGCCGTGGGATAAGCTAACAGAGAAGGGACGAGACTCGTACCGCAAGATGCACGCGTGGGCATGCGACGAGGCGGCCATCATGCTCCTGAAGTCGCTAATCCCCAAGAAAGtTGGGACGAAGGATGGCAATTCCGGCCCCGGATTCGGAAGGTCAGAGAGCGATAGCGACGAACGCTTGGCGCATATGCTAAATGAAGCCTCGCATATCATGAAAACACCAACCCTGCAGAGCAACAATGACGACTCGCGGAGCAACGATGACTCCAGCTCCCCCCGGACGCAGTGTCCCTCGCCGTTCTCTAATAAGGACTCGAGTCAAAATAGAAGgctgaaaaaatatgaaaatgatgaCATTCCGCAAGAGAAAGTTGTGCGCATATATCAAGAAGAACTTGCAAAAATCATGACGAGAAGGGTGGAAGATATGCGACACAATCGAGATGGATTTCCAGGCATGTTTCCTCCTTTTTTCAGCGGCGGCATGCCTCCGCACATGGAGAGGCCACCAGAGGATATCCGGATGGCATTAGAAGCATATCATCGAGAACTAGCTAAAATACAACCTGGTGGCAACATTCCAAACCTTCATAACTTGCCCGGAATGCCACCCTTCCCCAATCTACTGGCTCTCCAACAACAAGCGATGCAAGTACAGAATCAACACATGAATGGTTCAGGAGCCGTTCAAGATTTGTCCCTTCccaaagaaaaaagtaataaagtgaATGGCATAATCGACAACGATAAAGAAAGGCAAATGGATGCCGAGGAAGCGATAAGACACGCTGGGAGTGCATTTTCATTAGTGAGGCCCAAACTTGAACCTGGGCAGCAGTCAACAGGATCATCGGCTTCCAGTCCTCTGGGAAACGCTATATTACCTCCAGCAATAACACCTAACGATGAATTCAGCAGTTCCGCAGTAGCGAGCCCGTTACAAAGAATGGCATCTATAACAAACAGCCTAATATCTCAGCCTCCCAATCCTCCACATCATGCACCACCTCAGAGGTCAATGAAAGCTGTTCTTCCACCAATAACTCAACAGCAGTTCGAtctctttaataatttaaacactGAAGACATTGTTAAGAGAGTTAAGGAAGCACTCAGTCAGTATTCAATAAGCCAAAGGCTATTTGGAGAGTCGGTACTTGGCTTGTCGCAGGGTTCCGTGAGTGACTTACTCGCCAGGCCCAAACCATGGCACATGTTGACCCAGAAAGGAAGAGAACCCTTTATtagaatgaaaatgtttttagaagaTGATAATGCCGTGCACAAATTAGTAGCATCGCAATATAAAATTGCTCCAGAAAAACTTATGAGAACTGGAAACTACAGCGGAGCACcaaTTTGTCCGCCGAACATGAACAAGCCGATGCCACCAACACAAAAAATGTTGTCCGATGCTACTTCACTTCTAAGTAAAATGCAACAAGAACAGCTTCTTAGTTCTGGCCATTTGGGACATTTAGGACAACCTACACCACTCTTGTTAACCCCACCCGGATTTCCTCCACATCACGCGGTAACTTTACCGCCTCAGCATCACGATAATAACAACAAAGAAAGAAAACCACAACCCCCTGCCCAACCGCACCATCAACCTTCTATTATGCGAAGTCTACATCAACATATGTCGCCTAGTGTTTATGAAATGGCAGCTTTGACTCAAGATCTGGATACCCAAACTATCACAACCAAAATAAAGGAGGCATTATTAGCAAATAACATTGGACAGAAAATCTTCGGTGAGGCCGTATTGGGCTTATCGCAAGGATCAGTTAGTGAATTACTATCCAAGCCCAAGCCGTGGCATATGCTTAGTATAAAGGGCCGAGAACCATTCATCCGAATGCAGCTTTGGCTCAGTGATGCTCACAATATCGATCGTCTTCAAGCATTAAAAAATGAAAGACGAGAAGCAAATAAACGAAGACGATCAAGTGGTCCCGGACAAGACAACTCTTCGGACACGTCTTCCAACGACACATCGGAGTTTTATCATTCAAGTTCCCCGGGTCCCACTTCTGGAGTACCGTCAGCTAAAAAGCAAAGAGTATTATTTTCCGAGGAACAGAAGGAAGCATTAAAATTAGCATTCGCGCTGGACCCTTATCCGAATATGCCTACAATTGAATTTTTGGCATCCGAATTAGGATTGTCTACGAGAACAATAACAAACTGGTTCCATAATCATAGAATGCGGTTAAAACAACAGGCGCCTCATGGTCTACCGGCTGAGCCGCCAGCACGAGATCAATCATCGGCACCCTTCGATCCTGTACAATTTAGGCTTCTGTTAAATCAGAGGTTGCTCGAATTGCAAAAGGAAAGAATGGGGCTTGCTGGCGTGCCCCTTCCATATCCGCCATACTTTGCCGCCAATTCTAATTTTGCCGCATTGATGAGTCGAGGCCTCTTGCAGCCGGACGATCAAGCGAAGGACGCAGCAAGCGGTCTGGACCTGTCGATGCCTCTGAAGCGAGAGCCGGACGGCGATGACTTCGAGGACGATGACGTCGAGAGCAACCTCGGCTCGGAGGACTCAATGGACGAGGAATCGAAGACTGAGCCGAAAGCGGCATCGACGCCGGCGAGTCGGTCCAGCAGGAGAAAACCGGTGGCTCCCCAGTGGGTCAACCCGGACTGGCAGGACGAAAAGCCGCGGAACCCCGACGAGGTGATCATCAACGGAGTGTGTGTGATGAGGAGCGACGACTTCCGACGGGACCCGGAGCAGACGGTGCGCGTGGAGCCGTCGCCAGTGCCGCGCGAGACGTCGCCGGGCCCGCGCACGCCGCACACGCCGCACACGCCCACACCGCACACGCCGCGCCCGCCCCTCACCCCGCACGCGCCGGACGTGCTGCCCGACGACAAAATTAAGACTGAGGCAGACGACGACCGGTGGGAGTACTAG
Protein Sequence
MCIVIVYLAEIAQLVEDVRRLQASLSALQEAHAQQLQRLEERLDEKKQHIARLEARLDTQRDYDDIKREISLLRSMDLGSNERLDRKPEPLRSPSAPALREERDSAERERSTERRDPGAEEWASTPPPLNNNTTHHNNNGPLPLPLPPPSPYRFEEHRPYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGNSGPGFGRSESDSDERLAHMLNEASHIMKTPTLQSNNDDSRSNDDSSSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDMRHNRDGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPGMPPFPNLLALQQQAMQVQNQHMNGSGAVQDLSLPKEKSNKVNGIIDNDKERQMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNDEFSSSAVASPLQRMASITNSLISQPPNPPHHAPPQRSMKAVLPPITQQQFDLFNNLNTEDIVKRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPICPPNMNKPMPPTQKMLSDATSLLSKMQQEQLLSSGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPQPPAQPHHQPSIMRSLHQHMSPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGVPSAKKQRVLFSEEQKEALKLAFALDPYPNMPTIEFLASELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNFAALMSRGLLQPDDQAKDAASGLDLSMPLKREPDGDDFEDDDVESNLGSEDSMDEESKTEPKAASTPASRSSRRKPVAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRRDPEQTVRVEPSPVPRETSPGPRTPHTPHTPTPHTPRPPLTPHAPDVLPDDKIKTEADDDRWEY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00887212;
90% Identity
iTF_01443621;
80% Identity
iTF_00261736;