Ccec020202.1
Basic Information
- Insect
- Calycopis cecrops
- Gene Symbol
- JARID2_1
- Assembly
- GCA_001625245.1
- Location
- LUGF01039482.1:101541-114602[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-19 8.4e-16 59.2 0.2 6 89 794 874 791 874 0.93 2 2 6.1 2.6e+04 -3.3 0.0 57 85 951 977 940 978 0.58
Sequence Information
- Coding Sequence
- ATGCGGCGAATAGGACATCTCAGACCTGAGTTTGTGCGGCAAACATTAGTTGAGAAGAGTGTGCCTGGACGGACCCTGCGCTTAAAGATAGTACACATCCATCGACACACACAACCCATCGTATTAGTTAAAAGACTTGAAAACACATTGGATGCGTTTAAAAAAGAACCAACCATTCCTAATCACAAAAAGAACAATCATGTTGAAAATCACAATGTGCCTAAATTTCCTGCGCGGCGTGAACCCGACAAAGCGGCACCATTTGCTAATACGCTCTCCTCTTCTTCCAAAAAGAAGACAGGAACAGAGGAGGCCTCTACATCTGCAAATGCCAAGATCAAAAACCTTAAAATGAAGAAGAAATGTGTTGAATCAGATCCTAATAATACAGGTTTATACTATGGAACTAATGGTATAGAACGTTGGATATCGGAAAGTACAAAGGATATCACAAAAGTTAAAGACTTTAAAGTTCCTGAATTGccacaaaagaaaaagaaaattgaaaaaagtcCAACTAAAACACGAAATGCTTCAAAAATTGTCAGCCCACCAAAGAATGTTTGTTCATCTAAAAAATTCGTGTATCTCAAAGACGTAATGACTGCGTCTCAGGACGACATTAATGGTAATTGCAACAATTGCACTCGTTGTGAAGTAATTAAAAAGGTAGTGGAGTTATCAAAACTAGTTAAGGATACACGCAAAACTACTCGTAGTAACGCCCTAGATATTGATCCGAATACAGATATGACAGTCTCTGCCTACACTAACATACCGAGCCCGCGTGTTCATGGTACGACCATAACACGTCCAGAAAAAACTAGAGCATTGAAAAACGATGAACAACAAGCATTTTACATGGACCTTTTACCAGGGTCTGATAAAATAGTAGAAGTGTCGTGGTGTAAAATTCCCAATCGTAAAGATTCCCTAATGAGCGCTCGCCTTATTTCGAAAACAAATTTGACAAACTCTGGGGACGTCACGTTGGCAAATAATGAGACGTTACTAGACAAGTTACTCCAACTGTATAAAGAAAAAACTCATGGAGAAAAATCGACTAAGCCTACAAATACGGAAAAAGaattatgtaaacaaaataattcaGATAAACCCTTAAACAAGTTAACAAATATCGAGACAAGCGTCCAAAAAGAAGCAACTGTAGTGATTCAAACATGCAAAcaaatttgttttgaaaatgtatcAAAACAAACGAATTTAGAGAAATCAACGTGTAAGCAAATAACTGCGGAGAAAGCAACAAGCAAGCAAGTATCCACGGAGAAAtctgcaaacaaacaatcaacctTCGAAAAAACCACAAGCAAACAAACAGGCGCGGATAAATTGACGGCCATGGagaaacctaaaaataaaataacaaacaacacGGACAAACCTAAAAATATTCCAAAAGCGGATCAACCAGTCAATAACTATCCAATAAACATGGAAAAAAGGAACAAACAACTTATTGTggagaaaacaaaaaacaaacaaacaactgtTGATAAAACAATTGGCAAACAAACTAATCTAGAGAAACCAGCAGGTAAGCCCACAACTCCCGAGAAATCGACAGGTAAGCCTACAATTCCCGAGAAACAAGCAGGGAAGCCCACAACTCTTGAGAAACCGGCAGGTAAGTCCACAACTCTCGAGAAACCGGCCGGTAAGTCCACAACTCTCGAGAAACCGGCAGGCAAGTCCACAACTGTCGAGAAACCGGCAGGCAAACCCACAACTCATGAGAAACCGGCAGGGAAACCCACACCTGTCGAAAAACCAACGAAAAAACAAACTACTGTAGAGAAattaacaagcaaacaaaccaCTGCCGAGAAACCAGCTACTAAACAGACAGCCACAGAGAAATTAACTAACAAAGCAACAACCGGGGAAAAGTCAATGAACCCCCAAACAAGTATCGAGAAGccaacaaacaaaacaactaACGTTCTAAAGAAAGATAAAGGTGACAATGAAATTTCTCTCGCAAAATTCGCAGAAACAAACGGCGAAAACAAGCCAGAGAAAATAATCAAACGAAGTTCGACAGATAAAAGAACACACCCGAATGATAGTGCAATGGGTGATAGTAAGAagaaaaaacttgaaaataattttcctaAGAGTTTAGACCGTGCGAAGTTGGTAGATGCTCCTGTTTTTTATCCTACAGAAGCAGAATTTACTgATCCTATTGGTTACTTCGAAAAGGTGATGCCAATAGCTTCACAATTTGGAATTTGTAAAGTGGTGCCCCCTGCGGATTTCACGCCAGCGTGTACGCTAAGCGACACAAGTCGTTTCACAGTAACTAATCAATACATACCGCGGTTGTACACTCGATGGGGGCCTGCCTTCAGAGAAATGTGCGCAATTCGTTCCTACTTAGCCTCACAAAAAGTGCACTTTACAAGGGCCCCGTTGttggAGGGTCTAGAAGTGAATTTGCCCAAAATGTATCACACAGTACAGCGGCTGGGTGGATTGAAAAATGTATTCGATAAGAAAAGATGGAACCGAGTCGCTGAGGAGATGCACTTTTATCAACTCACCAATCCGAGTAAAAAGCTTGAACAAATCTACGTTAAATATCTCCTGCCGTACGATACTCTGACAAACAGGGAAAGACAAATGAAAATATCCGAGGTGGAACAAATGTGGCAAAAGAAGAACAAGAAAATGTTGGAAAGGGCGATAAACCCATTACTTCGACAACAGCGCCTGCTGGGAGAAGCGAATTCGGAATCAGATTCGGATACGGATCTGGATGGAGAGGCGGAGGAGTGTATAGTGTCGGGGAGAACCATGAACCTGAACAATTTCGAGAAGGTAGCACAGAACGCGTTCAAAATGTACATCCCACCTAACGAGGAAGCGAGCACCAAGACCATAGAGAATTTATACTGGAAGTTGGTCCTGTTCGGAGCGGACCACGTGTGCGTCAACAGCGCGTCCGTAGACTCGGGGGAAGAGGGGTACGGGTTCACCAAGAACAAGAACAGCCCGTACGGGAAGCATCCGTGGAACTTGAAGGTGATAAGTCAAAACAACGGCAACCTACTCCGGCCGCTGGGCCCAGTGCTGGGGCTCACTGTGCCCACTCTACACTTGGGCATGATATTCAGCACTAGCTGCTGGCACCGCGACCCGCACGGACTGCCCTGGATAGAGTACATGCACCAGGGACCTGAGAAGATATGGTACGGAATACCGGACGAGCAAAGTCAGAACTTCCGCAAGGCTGTCGAGATACTCTGTCCGACGGTCTGCCAGAACAAGGGGATCTGGCTGTCGTCCGACATCACCATGATTCCGCCCAACATGCTGTTGGAACACGAAGTGTCGCTGTCTCGTATCACTCAGCGGCCGCACGAGTTTGTGATAGTGTTCCCCAAGGCGTATTCTAGTTCCATATGTACCGGCTACACTATATCGGAGAGTGTGTACTTCGCTACACAGTCCTGGCTGGGCAATATGGCTACCGTATTCCAGGAGCTGCGTGAGAGCTGCGAGCCGACGACATTCGCATTAGAGCAGTTACTGATCTGCGTCGCTCGGGACGCGCGCTCGCCGCTGTGCGTGCTGCAGCAGGTGCGCGCGACGCTCTCGTGTGTCATCACCGCCGAGCTCGCCGCGCGCGCCGCGCTCAAGAGATACGGTCTGCAGGTGACTGTTAACAAGGGTACGAGAGGAAAGCGAAGACTTATTCGGCATCAAGACGAATGTGAAATTTGTCGGACCACACTATATCTCTCAAAGGTAAAAGGCGTATTCGGCAAACAGTCCGCATTGTGCGTACAGCACGCACTGCGAGTGCTCGTGGAAAATAAGACGGAGGCAGAAGACAAGAAGAGGACAAAAGACAACATTGAGCTGGAAATATTCTTCACTAAGAATGAGTTCGAAGAAATCGAACAGAATCTGCAGAAACGTCTGCTAAGTATAAATGGCTTCGAGAAATAA
- Protein Sequence
- MRRIGHLRPEFVRQTLVEKSVPGRTLRLKIVHIHRHTQPIVLVKRLENTLDAFKKEPTIPNHKKNNHVENHNVPKFPARREPDKAAPFANTLSSSSKKKTGTEEASTSANAKIKNLKMKKKCVESDPNNTGLYYGTNGIERWISESTKDITKVKDFKVPELPQKKKKIEKSPTKTRNASKIVSPPKNVCSSKKFVYLKDVMTASQDDINGNCNNCTRCEVIKKVVELSKLVKDTRKTTRSNALDIDPNTDMTVSAYTNIPSPRVHGTTITRPEKTRALKNDEQQAFYMDLLPGSDKIVEVSWCKIPNRKDSLMSARLISKTNLTNSGDVTLANNETLLDKLLQLYKEKTHGEKSTKPTNTEKELCKQNNSDKPLNKLTNIETSVQKEATVVIQTCKQICFENVSKQTNLEKSTCKQITAEKATSKQVSTEKSANKQSTFEKTTSKQTGADKLTAMEKPKNKITNNTDKPKNIPKADQPVNNYPINMEKRNKQLIVEKTKNKQTTVDKTIGKQTNLEKPAGKPTTPEKSTGKPTIPEKQAGKPTTLEKPAGKSTTLEKPAGKSTTLEKPAGKSTTVEKPAGKPTTHEKPAGKPTPVEKPTKKQTTVEKLTSKQTTAEKPATKQTATEKLTNKATTGEKSMNPQTSIEKPTNKTTNVLKKDKGDNEISLAKFAETNGENKPEKIIKRSSTDKRTHPNDSAMGDSKKKKLENNFPKSLDRAKLVDAPVFYPTEAEFTDPIGYFEKVMPIASQFGICKVVPPADFTPACTLSDTSRFTVTNQYIPRLYTRWGPAFREMCAIRSYLASQKVHFTRAPLLEGLEVNLPKMYHTVQRLGGLKNVFDKKRWNRVAEEMHFYQLTNPSKKLEQIYVKYLLPYDTLTNRERQMKISEVEQMWQKKNKKMLERAINPLLRQQRLLGEANSESDSDTDLDGEAEECIVSGRTMNLNNFEKVAQNAFKMYIPPNEEASTKTIENLYWKLVLFGADHVCVNSASVDSGEEGYGFTKNKNSPYGKHPWNLKVISQNNGNLLRPLGPVLGLTVPTLHLGMIFSTSCWHRDPHGLPWIEYMHQGPEKIWYGIPDEQSQNFRKAVEILCPTVCQNKGIWLSSDITMIPPNMLLEHEVSLSRITQRPHEFVIVFPKAYSSSICTGYTISESVYFATQSWLGNMATVFQELRESCEPTTFALEQLLICVARDARSPLCVLQQVRATLSCVITAELAARAALKRYGLQVTVNKGTRGKRRLIRHQDECEICRTTLYLSKVKGVFGKQSALCVQHALRVLVENKTEAEDKKRTKDNIELEIFFTKNEFEEIEQNLQKRLLSINGFEK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00687698;
- 90% Identity
- -
- 80% Identity
- -