Ccec021145.1
Basic Information
- Insect
- Calycopis cecrops
- Gene Symbol
- osa
- Assembly
- GCA_001625245.1
- Location
- LUGF01040639.1:206955-227938[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-19 4.4e-16 60.1 0.0 26 89 246 306 221 306 0.89
Sequence Information
- Coding Sequence
- ATGCTCATCCTGGTAGACGCTGCTGGAACTCAGAACGTACCGATGCCACCGCGGCCGTCGTCGTCGTTGTCGGACGGCAGCGGTCCGACGGCGCGCGCGGCCGGCCCCCCGCCGTCCGCGCCGCCGCCGGGCGCCATGCTGCCGCAGCCCTACCCTCACCACGGGTACAAGCCGGCGCCCTACCCGCCGCAGCCCTACCCCTACCCGCCGCGCAACCACCATCCCTACCCGTACGGCGCGTACCGGCCCACGCCGCCGCCGCATCCCTCGCAACACTATCCACCTATGAAGGGCGGCAGGCACATGGGCCCACCGGGCGAGGCGATGGGCCCGCCGACGGCGCCCGGCGAGCACGACAACGGGCCCGCCGCGCCCGCCACCGCGCTCGTCACCACCGGCCCCGACGGCGCGCCGCTCGACGAGGGCAGCCAGCAGAGCACGCTCAGCAACGCCTCAGCAGCGAGCGGCGAGGAGCCCTGCGGCACGCCGAAGAGCTCGCGCAAGGAGTACAACGCGGGCAGCGCGGCGCCCTCGCCCTCGCCGGGCGGCGGCTCGCACTCGTCTCTACACGACGACTACGACGCCTCCCCCTCGCCCTGGCCGCGCCCGCCCTCTAGTCCCGTATTTAACAGTCACATACCGCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCCCCGGAGCGGCGCGGCTGGGTGGAGCGCCTGCTGGCCAAGCAGCCGCTCGACCTGTACCGCCTGTACCTGCTGGTGCGCGAGCGGGGTGGGTTCGTCGAGGTGACGAAGAACAAGACATGGAAGGACATCGCCGGGCTCCTCGGCATAGGCGCCTCGTCGTCGGCGGCGTATACGTTACGCAAGCACTACACGAAGAATCTATTAGCGTACGAGTGCCACTTCGACCGCGGCGGCATCGACCCGCAGCCCATCATCAACCAGGTCGAGGCGTCCACCAAGAAGAAGAGCGGCAAGTCCAACAGCACGAGTAGCGCAGGCTCGTCTAACTCGTCGGAGCAGTTCGGTAGCAGTACGGCCCCGGGCGGAGCGCCCATGGAGCCCTACCCCGCGCACTACGCGGGTTACCCTCCCCAGCCCAACCAGCCGCAAGGCGGCGGGCCGGGCGGCGACAACCTCGCCGCCTCCAACCCCTTCGACGAGCCGCCGGGGCCGAGGCgacccccagGTTACCAACAGGGTTACGGCTACGATTATGGATCTCCTTACCCTACAAATAGGCCCGTCTATCCACCTTATGGCCCCGAAGGCGACAGGGGCTACGGAGCGGGCGGCGAGTACCGGTACGGCAGCTATGGCGGCGCGTACCGACCCGGTGGGCCGCATGCGCAGCACCCGCCTCACCCGCAGCACCCGCCGCATCCCCCGCACTCGCCACATCCGCCCCACCCGCCGCAGCAGCCGCACGAGGTAGGCCACTCCTACAACTTGTCCAACGTctaa
- Protein Sequence
- MLILVDAAGTQNVPMPPRPSSSLSDGSGPTARAAGPPPSAPPPGAMLPQPYPHHGYKPAPYPPQPYPYPPRNHHPYPYGAYRPTPPPHPSQHYPPMKGGRHMGPPGEAMGPPTAPGEHDNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEPCGTPKSSRKEYNAGSAAPSPSPGGGSHSSLHDDYDASPSPWPRPPSSPVFNSHIPPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAKQPLDLYRLYLLVRERGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKSNSTSSAGSSNSSEQFGSSTAPGGAPMEPYPAHYAGYPPQPNQPQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYDYGSPYPTNRPVYPPYGPEGDRGYGAGGEYRYGSYGGAYRPGGPHAQHPPHPQHPPHPPHSPHPPHPPQQPHEVGHSYNLSNV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00642124;
- 90% Identity
- -
- 80% Identity
- -