Cspl038679.1
Basic Information
- Insect
- Calopteryx splendens
- Gene Symbol
- stc
- Assembly
- GCA_002093875.1
- Location
- LYUA01000451.1:1-15289[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.68 8.2e+04 -3.6 1.6 15 19 516 520 515 520 0.81 2 7 0.06 7.2e+03 -0.2 2.8 4 13 549 558 548 559 0.86 3 7 2.4e-08 0.0029 20.2 14.0 3 19 566 582 565 582 0.92 4 7 3.6e-09 0.00043 22.9 12.4 1 18 618 635 618 636 0.97 5 7 0.1 1.2e+04 -0.9 1.5 7 13 640 646 640 647 0.81 6 7 1.1e-05 1.3 11.8 11.8 1 18 676 693 670 694 0.85 7 7 0.14 1.6e+04 -1.4 1.4 5 10 728 733 728 733 0.96
Sequence Information
- Coding Sequence
- ATGGAGAATTGGAACAATCCGTATTACTACGGGGGAGACCctatggatttttttggaatgtacGAACATCAGCAGCAGGAGTCAGTTCAGTGTGGTCCACTGACTGATTTTAGTCAACTGCCTGTGCTAAGTGCCATACCACTGGCACCTGCCATACAGCCGACACCATTGGAATACGTGGAAAGGAATTTAATATCTCAAAACCATCCTCCTCCTACAATGTCCCATGATAACTCCAATCCCCTATACATCCCCCATAGTATTGGAAGTGATAACAATATGATCGATCATTATAGTGCTATGACTTTTTCGTCTGTGCCTTCTATACCTAGTGAACCACCTCCAAGCGAATGGTTAGGACTTCCTGCGACAACAACATACGATCATTCGATTTCATGTTCCATAAGAGGTGGTCGTTCCATAAACAGCTCTAGAATACGTTCCAGTAATCGTTCGAATTCAGGACGAGTCTTCAATAGTCGAGGCAAGCACCAGGGGCGATCTGCCGAGGGAGGCGGAATAACCAACCCTGAATCAGAAGAGAGCTCGAAAAGAAATGACGCGGAAAACAAGGGTAACTCCGAAAGACAGCGGTACTTTTACGACAACATTAGAGGTTTCCGGGGGTCTGGACGACCAAGGAGTGGCGGAAATTCTTGGAGTCGAGGTCCTCGTGGAAGCTCATCCCGTGGTATGACTTTAGCTCGAAATGATACCGCACCGCCTTCTTATACGTATGACAAATCAAATGGTCGCGAAGAAAGACATAGGGAACGTCGTAGAGTAGTGGATGAAGCTGCTGCTTTTTTGATACCGCCCCAGTCCGAAAACTGGAACAGTCAGCGTCGCGATGAGAACCTGCCGAAGGAAAATTTCAGAAgctcaaatgaaaatatgagaagtCGCCCAGAAAATCGAAGAAACCGTCAATACAATAGAAGAAAACCTATAATCAATGGTGACGAGAAGGTGGAAAGTGGCTTGAGCCAGATAGATAGCGATAAGAATCAGCACGATAGCAGTTTGGATCACTCCGACAACGGAAGAGTTAGGACGGATGGTCGCAGGAACTTCGGCGAAAATGCGAGAAGTTCCAGTGAATACGGTAGAAACCACCGGGAAGGGCGCCGAAACCCGAATGACAACCCGAGGAATAAATCTGATTCTTGGAGAGGCACCAGCCGTGATTGGCGGTCCGGGGGAGATGGTGGTCGGAACTATAATGAAGGCGGTAGGAACTATAATGAAGGTGGTCGGAACTATAATGACGGTGGTAGGCAAGCGTATATTTCGAGTGACAGAAAGAATCAATCCGACTCCTGGAGAATTCGCAAGGAACGCGATGATGAATCTAAGGATAAGAGGAAAAATTTAGAATCTGAATCTTTTGGTAGGGTGGTCGTAGAAAACAGCGGTAAAGGTAAAGAAAATGAAGCGAGTCGAAGGGAGAAGCTAGAAGAAAATTTACGTAGAGGGAACTATGAGTGCATGTGTCAGTTTTTCATCTGCATCTCTTCTCTTGTACATTTAGATGGAGGTTGGCGTTGTCCTGCATGTCAGACTGTCAGGGAATCAATACCTTATGATTACTTTTGCTTCTGTGGGAAAGTGAGAGATCCAGAGTGGAATCGCCATGATACTCCACACTCTTGTGGGGAAGTTTGTGGAAAAGGCCACGAAACTCCAGCCCACTGCACGCACACTTGCATTTTGTTGTGCCACCCAGGGCCATGCCCTCCTTGCTCAGTGATGGCATCTAGgAACTGTGAATGTGGTAAAACATCTCAGGTCATAATCTGTGGAAGAAGCCAGGCTCTTCTGTGTGGAGATGAATGTGGAAAAGACCTAAACTGTGGTGTTCATAAATGTTCAAAGTTATGCCATGAAGGGCCTTGTTCAGACTGTGAGGTTATGGTGAAACAAGtctGTCACTGTGGGAAGAATGAACGCAGTGTTCCTTGTGTTGCTAGCTCTGCTGGGATAGAATTTTATGAGTGTAAGACAAAGTGTGGACGCACATTGGATTGCAAAAACCATAAATGTGAGGCATTGTGTCATCCATTGGAATGCAGCCCCTGTGCTTTAATGCCTGAACGTGTCACAAAATGTCCATGTGGGAAGGCTTCTCTGTCTGACATTGAAGGAGCAGTTCAGCGACAGTCTTGCCTGGACCTTGTGCCTACGTGTGAGAAGATTTGTGAAAAGGTTCTCAGTTGCGGTCAGCCAGNN
- Protein Sequence
- MENWNNPYYYGGDPMDFFGMYEHQQQESVQCGPLTDFSQLPVLSAIPLAPAIQPTPLEYVERNLISQNHPPPTMSHDNSNPLYIPHSIGSDNNMIDHYSAMTFSSVPSIPSEPPPSEWLGLPATTTYDHSISCSIRGGRSINSSRIRSSNRSNSGRVFNSRGKHQGRSAEGGGITNPESEESSKRNDAENKGNSERQRYFYDNIRGFRGSGRPRSGGNSWSRGPRGSSSRGMTLARNDTAPPSYTYDKSNGREERHRERRRVVDEAAAFLIPPQSENWNSQRRDENLPKENFRSSNENMRSRPENRRNRQYNRRKPIINGDEKVESGLSQIDSDKNQHDSSLDHSDNGRVRTDGRRNFGENARSSSEYGRNHREGRRNPNDNPRNKSDSWRGTSRDWRSGGDGGRNYNEGGRNYNEGGRNYNDGGRQAYISSDRKNQSDSWRIRKERDDESKDKRKNLESESFGRVVVENSGKGKENEASRREKLEENLRRGNYECMCQFFICISSLVHLDGGWRCPACQTVRESIPYDYFCFCGKVRDPEWNRHDTPHSCGEVCGKGHETPAHCTHTCILLCHPGPCPPCSVMASRNCECGKTSQVIICGRSQALLCGDECGKDLNCGVHKCSKLCHEGPCSDCEVMVKQVCHCGKNERSVPCVASSAGIEFYECKTKCGRTLDCKNHKCEALCHPLECSPCALMPERVTKCPCGKASLSDIEGAVQRQSCLDLVPTCEKICEKVLSCGQPX
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -