Cspl104331.1
Basic Information
- Insect
- Calopteryx splendens
- Gene Symbol
- -
- Assembly
- GCA_002093875.1
- Location
- LYUA01003797.1:1-36732[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0018 1.3 12.3 0.1 1 20 282 303 282 308 0.90 2 17 0.28 2e+02 5.4 0.1 2 23 388 412 387 412 0.92 3 17 0.087 61 7.0 0.3 2 23 438 462 437 462 0.91 4 17 0.01 7 9.9 0.1 2 23 488 512 487 512 0.92 5 17 1 7e+02 3.6 0.2 3 23 539 562 537 562 0.84 6 17 0.23 1.6e+02 5.7 4.1 1 23 593 616 593 616 0.96 7 17 0.00054 0.38 13.9 0.7 1 23 863 886 863 886 0.96 8 17 0.0045 3.2 11.0 0.9 1 21 892 912 892 916 0.92 9 17 0.0056 3.9 10.7 0.7 1 23 1659 1682 1659 1682 0.90 10 17 0.0082 5.7 10.2 0.7 1 23 1688 1710 1688 1710 0.95 11 17 0.036 25 8.2 1.4 3 20 1843 1860 1841 1862 0.93 12 17 0.0054 3.8 10.8 1.2 1 19 1866 1884 1866 1887 0.93 13 17 0.023 16 8.8 1.1 1 23 1895 1917 1895 1917 0.96 14 17 0.00024 0.17 15.0 5.0 2 23 1924 1946 1923 1946 0.95 15 17 0.24 1.7e+02 5.6 3.4 1 23 1953 1975 1953 1975 0.92 16 17 4.1e-06 0.0028 20.6 0.7 1 23 1981 2004 1981 2004 0.96 17 17 1.4e-06 0.001 22.0 0.5 2 23 2019 2040 2018 2040 0.94
Sequence Information
- Coding Sequence
- AGACTTGAGCCTCAGCGGCCTCATTTGGTATCCGTGAGAACGGGGTCTACTGCGGCTGCGGCCTGCTCATCGACCAACCAGAAGAAGAGACCAGCAGAGCCGCATTCCCTTGACGGTTCCGCATCTAAAAAGGTCAAATCCAAGAGGGGTGCCATCTCTGCGGCATCGGAGGGCCATGCGGTGGCACAGGTACGAGGAGCGGCTCCCAAGCAGTGCCGTTCACGACCCTCGTCGGACATCAAGAGGAAACCACAACCAAAGgatccAAAGGGAAGAACCGTTCCGACGGCATCACCGGAAACTCTCAGCCCATCTCAGCCAGCCAGTCCAGTACTATCCCTGGTGTCTTCGAGCCCGGATTTTTCGGTAAGGGACAACAAGAAACTAGCGGCACGGAAGCCGGCAGGGCCGGCTAACCGGGGGAAGAGAGCCAGTTCGATCGACGAGGAGGGGAAGGTCGGCACATCCACGGCAGACGGTCCAGACGTACCGAAACAGCCGAAGGACTCGACCAAAAGGCCGAACCCCAATAAGTTCGGCACGAAAACTGCAGTCGGTTTGGTCAAGAACCCTCCGGTAGCCCAGTCGAGCAAGGAATCGGtacagaagaggaagaagatcCAGGGCAGAGGCAATGTGCCGAACGTCGAGACGAAAGGTGGTTCTCGAACCAAGGGAGACATTGGCGGAACCGCAAACGCAACCCCGGAAATCATCGTCGTGGACAGTCCCGATGATTCTGACGGTGAAGGTTGCGTGGCGGAGATGTGGGGGGGTCTGGATTCCACAGATTCGGAGGAAGAGGTGGAGCGACAGGTCGTGGACCATTCGAACAGGGGGAAGTACTCGTGTCCCATAGATGGGTGCGACAAGACGTTCTCGCAGCTGAAAGGATTGCTGATCCACTCCGCGAAGGTTAAGCATTCCACCGACGAGCTAGTCAGCCTGCTAGTGGAAGATCCAGACCTGAGGGAGGAGTTGAGGAAGTCGAGTCTCATGAAAGGTTCCATTTTGCAGGAGATGCTCAAATCGGAGATTTTAGGAGCCGGGAAGGCTATGAAGAAGCCGGCGGAGACAGTTCCCTTGGTTCCCGATGGTGGGGACTCCGTTACGAGAAAGGAGACCTCGATTGAACCCAACCAGTCTACCCAACAGGTTTGGAAATGTGAAGTGGATGGCTGTGGGGTTGTGTACGGCACCAAACGTTCCATGTCCATCCACCAAGCTAATAAACACAATCCCGAGGGAGGAAACTCGGTTTCGAGCAAGGGAAACACCGCTAACCCCAACCAGTCTACCGGACAGCTTTGGAAATGCGATGTTGATGGCTGTGGCGTTGTGTACAACAGCAAACGTTGCCTGGCCATCCACCGAGCTTACAGGCACAATCCTGAGGGAGGAAACTCCGTATCTACCAAGGAAACCTCCGTCGATCCCAACCAGTCTACCGAACAGCTTTGGAAATGCGACGTGGATGGGTGTGGCGTTGTGTACAACAGCAAACGTAACCTGTCCATCCACCGAGCTAATAAACACAATCCCGAGGGAGGAAACTCCGTTTCGAGCAAGGAAAACACCGCTGACCCCAACCAGTCTACCGGACAGCTTTGGAAATGTGCCGAGAAGAGCTGCGAGGCTGTATTCAGCACCAAACGCTCCCTGGGCATCCACTGGTCTTACAGGCACAATCCAGACTTCGTCGGGAGGAAGTGGAGCGTCACAAACGTTCCCACCCTTCCTGTCCACCCTCTGAGCGAGGACCAAGTACCTGAGACCTACAAGTGCATCCATTGTGGGGAGCAGTTGAAAACAAGGAGTAGGTTGTACCATCACGTGCGAAATATCCACCGGTTTAATTCCGTGAGGCTTAAGACTGACAGGAAATGCAAGAAAGGAGGTTTGGATCGAGGGGAAGACCTTGTGCCGTCGCCTGTTGAGACGAGAACCGTTCCGGAGGACAGCCTGACTGCCGTTCAGGTCCCGTCGAGTTCCGGGGAGGGTCCGGCAGCTCCGCAGAGGACCTGGCCGAAGATGAGACCTTGCTGGGTGGTTTTGCACGACATCATGAAAGGGGACGGTCCACTGAACCACCTTCAGCGGGACGGCGAAGTGGACCTCGAAGACGAGCCTCCTGGAATGGGAGACGAGGTCAAGGCCCGCAGGGAGGGCATCATGAAGTACTTCCCGATCGTGTCCGGCATCTCTCCGATGGTGGGGACCCCTAGACCGAAATGCTTCTCGAATACTCCGTCGTGCACGGATAAGGTCAGGAAGACCATGGTTTCCTTCGGCAGCAAGCCGCCTGGCTTGAAGAAACCGACTCCGGTCGACCTTCTCTTCGCCAAAACCCTGAAGAATGTTCCCGGGGATTGTCCTGGGGAGGTCACGTCGTCGTCTTCGACATCTCCAGAGAAACCCGTCCAAGGGTGCTCATGGAAGCAGGCCGAACCATTGGGATTCAGGGAACTCTCGGTTTCCCTGGAGAAGTTACGCCCGAGACCAGGCAAGTCTGGGAGCGGTTCGGAGAAGTCTCCGGAGGAGGGAGATTCGGCCGACGAAGTTGACGGAGAGCAGTCCACCCAAAGTTACAACTGCGACATGTGTTCGCTGGTGTTCACAAACAAGATGAACATACGCTCGCATATAAAACTGATGCATGGACGGAAGGAGGCTTACACGTGTGGGGTCTGCATGAGGTCGTTCGTCAGCAGTCATAGTTTCACGAAGCACATCGAGGCAAGTGACCACGGCAAGGAGGCGGAATCGCTCGCCAACGGGAGCAGTTTCAAAGCCCATAGCAGGGTCATGAACCCACccaagaggaggaagagaaatgtgCTGATCCTCGACAGGACCTCGCACCCTTACAGGGAACAACTCGGTACCAGTCTTCAACACTCGGAAATGATGGACTCTGATACGGAAGCAGATTCGGATTTTCAATCTAATCGAGATTCGGAATCGAACTGCACGAAGACGTCTAGGTTTGGTGGCCGTGGATGCCCTAAAATAGATTCTCCAGTTGACCCTGACGCCTCTAGCCATACTGGAGATGTCGTTGAGGATTCCAAACTGTCTGAAGTGATACCGGAAGCTGGAATCCTAATGAAGGTATCTGAGGAGAGATCGCAGGACGGGTATCCAGTCAAGGACCTACATCGTGAACCTGTTATAGAACTCCAATCTTCCACTGATGAACCGAAGTCTGCAAACTCCCCAAGTCTTCCAGTGTCCGGAAAGTCTCCTAAAACTATTCCAGTGATCGGAGAGGAACCGTCATCTCCTGCGGGTGAAGCGGCCATTGGCAGCACGTCAGAACATCAAGATGCCAAGCCCGATGGACTGCGGTCCATTTCATCCAAAGGTGGCAGCACAGCAACCGAGAGTTTCTCCCTAGCTCGGGCAGAAGTTCCTGAATCAGTTCGAGAAGAGACTGGGGAGGAATTACTCTCAAAGGAATGCTTCACTGAAGACCCTTCAGGCTCTGGTACTTCGCAGCAGAGAGCTGACAGTGGCACATCAGAAGCCAGAGACTCGACTATAGGCCGAGCAAGCCCGCAACCGGTATCAGACAATGGAACAGTTTTGGTCGAAACAGCTCCGGATCTTCTGGTCCTAATTACTGACCCTGGTGATAATGATGTTTCAGGAGAAGAATCGCAAAGTGCAACTGATCCGCTTCATTTGGAGTCAGAGTCGGAAGATGAGAGGCCTGAAGGGACAGAGGAGAGCGCTGGGGCGAAATATGACGAAGATGAATCCGGCACAACAGGGTTCAGTATCTTCTGTACCTCATCGGAGGAGGTGGAGGCCGGAATCGTGGTGCGAGATAGATTGGTGGGCCCTGGAATTGAAGCGGTTTCCGTGACAGAGAATGAATTGGCAGATCTAGGAGAAGGAGTCACCAAGACAGGGGCTGGAGTGGCAGATCTAGGAAAGAGAGGAGTCACTGTGGCAGGGGATGGAGTGACAGATATAGGAAAAGGAGGAGTCACTGTAACAATGACTGGAGAGACAGATCTAGGAAAAGGAGACACTGTGACAGAGGATGGGGTGACAgataaaggaaaaggaggaatCACTGTGACAGGGGATGGAGTGATGGATCTAGAAAAAGGAGGAGTCACTGTAACAATGACTGGAGAGGCAGATGTAGGTAAAGGAGACACTGTGACAGAGGATGGGGTGACAGATAAAGGAACAGGAGGAATCACTGTGACAGGGGATGGGGGATGGAGTGACGGATCTAGAAAAAGGAGGAATCACTGTGTCAGGGGATGGAGTGACAGAGCTAGGAAAAGGAGTAGTCAATGTTACAGGGGATGGGGGGATGGAGTGACGGATGTAGGAAAAGGAGTCACTGTGACAGGGGCCGGAGTGACGGATTTAGCAAAAGGAATCACCGTGACAGGGACTGGATTGCCAGATCCAGGAAAAGGAGTCAGAGTAACAGAAAATGGTTTGGCAGATCCAGGAACAGGAGTAGTCTCTGTTACCATGACACCAGTTGAGGCTGCGATCGTGCCTGCTGAGTCAtcggagggaagggatggggtcGAGGAGGTGTCCTCCAGTACTGGTGAGTCGACAGTTTCCCGAGGGAAGGAGGATGGACTGGAGGTGGCAAACCAATCCACGGTCGAAGCGGACATGGGAGAGGAACAAGAGGAAGATCCTCCGGAATCTAGAAGCTCTGCAAGGGCTTCTGGTTGTGCGAGCGAGGAAACTCTCCGTGGCGATGACGAAACGGCCAGGGAAACAGCCGGAGAAGTGGTCTCCACTTCCTCAAATGGAGGGAATGACCCGGAAAGGACCACATCCGGAGATGTCGCAACAACTTCCAAAACTCCCGGCGAGCTGCAAGAACCGGAGGGCGAACCGGATTCGCATGGTCTGGAAACGTCTGCTTCTTGTCCAGACATCTCCGAGCTGGGTAAGGTGGGCTCGAGCACCGGCACGGATGTGGTATACGAGTTCCTTTGCGCCAAATGCACCAAGCCCTTCGCCAACAAGATCGCCCTGAGGAATCACTTCTACAAGGTCCACCGGAGGATTTGGCCGTACATTTGCCACAAATGCGGGTTGAGCTACAAGATTCGCGGATGGTACATGAACCACCTGGATTGGCACAGGAAGAATGACTGTTTGAATGCCGGGAGGGGCAGTTCAGCGGGGACGCCGGAGGGttcagagggagggggagagtgttCGAGCAGGATGGACGGGGAAGGTTCGACGGCCTCAGCCCCGGAGTCCCGGGAGTTGCACTGCGACAAATGCATGGGGACCTTCGAGGACAAGGCCTCGTTGAGCTACCACTTCTTCAACATCCACGTGAAGCGGAGGCTGTTCTGGTGCAAGCGCTGTCGGGTGGGCGTCCACCGGAAGCAGTGGGCCAAACACCTCTCGGGTCACGCCGGACCGGAGAAGACGTTCCGGTGCCGGAAGTGCAACATGGTGatggagacggaggagggagtCCTGGACCACTTCCGGCAGAACCACCGCTCTGGGAACCCGGTCATCTGCCCCGTGTGCCACTGTGGCTACCGCGACTCAGCGTCACTTAAGATTCACAAGTGCGCCACGAAGGATTACAAGTGCCCGCGGTGCGACAAGGAGTTCTCCTCAGTCCAGTGGTACCAGACCCACTTCTATAAGTGCCAGCTCGGCCTGTCCTACCACGAGTGTGACAGGTGCGGGACGCGGCTCATGTCGAGGTCCGAACTGAGGCTACACGGTCTTAAGCACGAGGCGGAGGAGTTGAACCAGTGCTCGAAGTGCCCGCGGAGCTTCAAGTACAAGACCAACCTCATGAGGCACAATCGGCACAGCCACGGTAGGCCGGGGAACAAGCACCCCTGCGACCAGTGCGGCAAGGTCTTCCACTGCACACAGGATTTGAAGCAGCATGCCGCCGTGCACACGGAGGCCTTGAGCTTCCGGTGCGAGGACTGCGGTGCGACCTTCCGGTACCGGAGCAACCTGGGACGGCACAAGCGGGAGATTCATGAAGgGAAATCGGTGAGCAAGAACAGGGATGTGCACTATTGGCCCTGCAAGGTGTGCAAGAAGGTCTTTCGCAGGTCCAGTGAACTGAAGCAACACATGGGTTTGCACATGAAGGTCTGGCCCTTCAAGTGTTACGTGTGCATGGAACCGTACAAGTTCCGGAGTTCGTGTTACGACCACTTCCAGCGGTATCACCGAGGAGTGCCGTGGGATGCCAAACTGGCCAGGACGAAACAGGATTAA
- Protein Sequence
- RLEPQRPHLVSVRTGSTAAAACSSTNQKKRPAEPHSLDGSASKKVKSKRGAISAASEGHAVAQVRGAAPKQCRSRPSSDIKRKPQPKDPKGRTVPTASPETLSPSQPASPVLSLVSSSPDFSVRDNKKLAARKPAGPANRGKRASSIDEEGKVGTSTADGPDVPKQPKDSTKRPNPNKFGTKTAVGLVKNPPVAQSSKESVQKRKKIQGRGNVPNVETKGGSRTKGDIGGTANATPEIIVVDSPDDSDGEGCVAEMWGGLDSTDSEEEVERQVVDHSNRGKYSCPIDGCDKTFSQLKGLLIHSAKVKHSTDELVSLLVEDPDLREELRKSSLMKGSILQEMLKSEILGAGKAMKKPAETVPLVPDGGDSVTRKETSIEPNQSTQQVWKCEVDGCGVVYGTKRSMSIHQANKHNPEGGNSVSSKGNTANPNQSTGQLWKCDVDGCGVVYNSKRCLAIHRAYRHNPEGGNSVSTKETSVDPNQSTEQLWKCDVDGCGVVYNSKRNLSIHRANKHNPEGGNSVSSKENTADPNQSTGQLWKCAEKSCEAVFSTKRSLGIHWSYRHNPDFVGRKWSVTNVPTLPVHPLSEDQVPETYKCIHCGEQLKTRSRLYHHVRNIHRFNSVRLKTDRKCKKGGLDRGEDLVPSPVETRTVPEDSLTAVQVPSSSGEGPAAPQRTWPKMRPCWVVLHDIMKGDGPLNHLQRDGEVDLEDEPPGMGDEVKARREGIMKYFPIVSGISPMVGTPRPKCFSNTPSCTDKVRKTMVSFGSKPPGLKKPTPVDLLFAKTLKNVPGDCPGEVTSSSSTSPEKPVQGCSWKQAEPLGFRELSVSLEKLRPRPGKSGSGSEKSPEEGDSADEVDGEQSTQSYNCDMCSLVFTNKMNIRSHIKLMHGRKEAYTCGVCMRSFVSSHSFTKHIEASDHGKEAESLANGSSFKAHSRVMNPPKRRKRNVLILDRTSHPYREQLGTSLQHSEMMDSDTEADSDFQSNRDSESNCTKTSRFGGRGCPKIDSPVDPDASSHTGDVVEDSKLSEVIPEAGILMKVSEERSQDGYPVKDLHREPVIELQSSTDEPKSANSPSLPVSGKSPKTIPVIGEEPSSPAGEAAIGSTSEHQDAKPDGLRSISSKGGSTATESFSLARAEVPESVREETGEELLSKECFTEDPSGSGTSQQRADSGTSEARDSTIGRASPQPVSDNGTVLVETAPDLLVLITDPGDNDVSGEESQSATDPLHLESESEDERPEGTEESAGAKYDEDESGTTGFSIFCTSSEEVEAGIVVRDRLVGPGIEAVSVTENELADLGEGVTKTGAGVADLGKRGVTVAGDGVTDIGKGGVTVTMTGETDLGKGDTVTEDGVTDKGKGGITVTGDGVMDLEKGGVTVTMTGEADVGKGDTVTEDGVTDKGTGGITVTGDGGWSDGSRKRRNHCVRGWSDRARKRSSQCYRGWGDGVTDVGKGVTVTGAGVTDLAKGITVTGTGLPDPGKGVRVTENGLADPGTGVVSVTMTPVEAAIVPAESSEGRDGVEEVSSSTGESTVSRGKEDGLEVANQSTVEADMGEEQEEDPPESRSSARASGCASEETLRGDDETARETAGEVVSTSSNGGNDPERTTSGDVATTSKTPGELQEPEGEPDSHGLETSASCPDISELGKVGSSTGTDVVYEFLCAKCTKPFANKIALRNHFYKVHRRIWPYICHKCGLSYKIRGWYMNHLDWHRKNDCLNAGRGSSAGTPEGSEGGGECSSRMDGEGSTASAPESRELHCDKCMGTFEDKASLSYHFFNIHVKRRLFWCKRCRVGVHRKQWAKHLSGHAGPEKTFRCRKCNMVMETEEGVLDHFRQNHRSGNPVICPVCHCGYRDSASLKIHKCATKDYKCPRCDKEFSSVQWYQTHFYKCQLGLSYHECDRCGTRLMSRSELRLHGLKHEAEELNQCSKCPRSFKYKTNLMRHNRHSHGRPGNKHPCDQCGKVFHCTQDLKQHAAVHTEALSFRCEDCGATFRYRSNLGRHKREIHEGKSVSKNRDVHYWPCKVCKKVFRRSSELKQHMGLHMKVWPFKCYVCMEPYKFRSSCYDHFQRYHRGVPWDAKLARTKQD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -