Cspl021321.1
Basic Information
- Insect
- Calopteryx splendens
- Gene Symbol
- lola_2
- Assembly
- GCA_002093875.1
- Location
- LYUA01000195.1:476293-498568[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00014 0.096 15.8 0.3 1 21 193 213 193 214 0.96 2 12 0.00012 0.086 15.9 0.7 1 23 222 246 222 247 0.92 3 12 1e-05 0.0072 19.3 0.8 1 21 475 495 475 496 0.95 4 12 0.0013 0.89 12.7 0.1 1 23 505 527 505 527 0.97 5 12 0.017 12 9.2 0.0 1 21 632 652 632 653 0.96 6 12 3.5e-06 0.0025 20.8 6.2 1 23 661 684 661 684 0.98 7 12 0.00071 0.5 13.5 0.5 3 21 782 800 781 801 0.96 8 12 3e-05 0.021 17.9 0.0 1 23 809 832 809 832 0.97 9 12 0.0093 6.5 10.0 0.4 1 22 1236 1257 1236 1257 0.96 10 12 0.0011 0.8 12.9 0.2 1 23 1265 1288 1265 1288 0.91 11 12 1.3e-06 0.00094 22.1 0.7 1 21 1422 1442 1422 1443 0.96 12 12 0.68 4.7e+02 4.2 0.6 1 15 1451 1465 1451 1468 0.91
Sequence Information
- Coding Sequence
- ATGAAATGGAGCTGTTTTTGCTTGCGTGCCAGTGTAGCGGAGAGGGAAACTGATTGCCGAAAACATGATCAAAAATATagtaAGGAGCAGTGGAGTCCGTTTCCGTTCCCGCGGACCGCCCTcgcaccctccccgcccccctcctccacgTCCTCGCTAGTTCCCTACTCCTCATCCACCGTCGTGGCGACAcattccccactccctccctcctcccccactgcCTCTTCCCTGCACCACGGCACgcacccttcctctcccacctGGGCGGTGTCCCCTCGGCACCCCTCTCATCATCCCCTGGCATCCCAGCGTCCAACACCCGGCGGGAAGCAAGTTAGGAGGAGGGTGGTCGTGGCCCTTCTCCCGCCcgatgaggaggaagaggcaCCCGCCGCGCCCCTCCCGCACCACCTGTTCTCcccgcaccaccaccatcaccaccacccccaccgACACTTGACCGGCCATCCCGGACTCTTCCCGCCTCTCTCCGCCTCCTACGTCACCTCCCATTCGTCCTCAAACGCCTCTTCGGCCACCACCAACACCTCCACCTCGCCCACCTCCAAGTCTTATGCGTGTCCACGGTGCGACCGAAGGTACTCAGTCAGCTACACTCTGGAGCGTCACCTTCGCTACGAGTGCGGCGTCGCGAAGCAGTTCGCGTGCCCAGTCTGTCTGCGCCGCTTCTCCCGTCGAGACGTGTTGCGCGCGCACCAGCGCAAGGCCGGTCACCATCACCACCAACACCATCGCCACCACCTCGTTCCCTCCCCGACCTCTGCGGCCTCGCGGGCAGTGGAGGAGGCCGCGTCGGCGGTCGTCGAGCTCCCCGCAGAAGTAGTCGGATCCTTGTTCTCCGGGAAGGAGGGCACTACTGTTCGGCCTACTGGCGAGTGTGGCCGGCGATATTACACTCGTAACTCCGCCGTCATCAATTGGGGTACAGTGTATTGCCTCAATTCTCGTGCCGTGCTGAGTGGTTCAATCCAGAGTGTCATAATGAAAGTGCCTCCTAAGAGAGCCTTTCTTGCAGTCATTTTTATTCAGAGTTGCCCCCTCTCTGGCCTCTTTGCAGGCGGAGCGGCGGAGACGACCACAGTGTACCTGGATTGGACCACTCAAGTGGGGAGGTCCTCCCCTTCGCCACCTTCCCCATTAGCAGCCGTTCCGACTTTATCCTCGTACAGCCGCGGTGCCTACCGACCCTCAAGAACCTGCCTCTCTCCGCAGCCACACCCTCAGTCCATCCCCCCGTACCCTTTGCCCCCCCTAACCACGGCCCCGCACCTTCCCATCCGTCCTGCTGTCCCCGCCTTGCCCCCGTCCATGACTCTATCCCCGGTATTCCCCGGGCCGTCCTCTGGCGTCGCCGAGAGGGACGCCGGGGGAGATCCTTCGTCGCCGTCCTCACGCCTGCACCCGTGCCCCCGTTGCGGCCGTCCATACAAGACCCGTTCCACCCTCAACCGACACCTGAGGTACGAGTGCGGGGGCGCTGGACGTCGATTCGAATGCCCCATCTGTTTGAAGCGAATCTCCAGGCCGGACACCTTCCGTCAGCACGCCCTCATTCACCGTTCTGAGGCTGCCGCGGCGGGAGCTGCTATGTCGGCTTTGTTAGATGTGGAGAAGCAGGAGGTAGAATTGGGTTCTCCCCCTTCTTCGTCGACCTCCATTCCTCACAGTTGCCGGACCCACGTCGGTCTGTCCCGAAGTGGTTGCCGCGATGTAAGGTGTGGAGAGTCGGTGCAATATGAGGGGGAGACCTTGGGGGGAGTAGGGGATTGGCTGGCTAGTGGTGGTGGCAGCGATGGTGGGTGGTACGCGGCTGATGGGTTGGGAACTGAGGGCCAGAGCACTGGACACACCCAGAGGGTCAAGGGGCGTTACGTTTGTGACGCCTGCGGGAAAGCGTACGCCTGGGTCTCAAACCTTACGAGGCATGTGAGACTCGAGTGTGGGAAGGAACCGCAGTTTCAGTGCCCCCAGTGCCACAAGCGCACAAAACACCTGTCTAACCTCAGAGTTCACATGCGAACCCGACACCCTGACGTGGATCCCTTCGTGGCTCTGGGCCTGAGTCCGCCGCCGATTAGGCTTGGTGAAGAGAGCTTCTCCTCCGAGTTGGAAGGATTTATATCTGAAACTCGATTGAAAGACGAAGTTGGTTCCCTTGACGATGTTCAGCAACTTTCACCCAATAACTTAGGGTTAGTTCCTCCGCGAGAGAGATTTGGAGGTATGGATTATAGTGCTTCAGATTTTAAAGAATCTAGTCATAGTTTTTCGATGGCGTGCAGGGGATCTCTAAAACCACCGTCCGACGGTTATTGGCTTTGCGATTTGTGTGGGCGTTCTTACACATTAAAGTCGACTCTTATGCGTCACAAGAGGTTAGAATGCGGTAAGGAGGCGTCGTTCGCATGCCCTTTCTGCCCTGCTCGTAGTGCTCGTGCGTCGAACCTAGCCAGGCATATAAGGACTATCCATCCAATGATTGGAAGTTTGGGGAAGATAGAAGAGCAGCAGAAGAACACGAAGAGGAGGACTGTAGTAACCAGGGGATCCGTTGTCGTTTCAGACCCGTACGTCATTACCTCGGCGCAGACGTCAGCTGAAGACCTGAAGAGTGTCCCCGTGGCCCATGATACCCGCCCAGCTTTCGGGGTCGCGAGGGAGTATATCAGACCGCCAGAAGGTCTTGAGTTGGGCTGGTACAGTGGTGGCGAATCATGTGTAGATAGTGAAGAGACAATTGTAGCCAATATGCCACTGGTGGCACAAAACAGTGCTCGTGTTAGTTTCTCAGAGGACCTTGACGCTGCCATGTTCTGTGTCCAAGTGAGTCCATCCATGGTTGTCGACTTGGCTGGCGCCTCCCCTACCGCATCTCCTGAGACTGCTCCCCAGTCCCAGCCCCCCCAAGGGGTTCTTCCACTCGTCTGTCCTTCGCTCGACGACCGAAGGGATACACGCGGTGGTTCGGACCGAACCCATGGACAACAGCAACAAGCCCCAACTCAACAACTACCCGTTTCGTATTTGCCGTACAACCTAACTTCCGCTCCCGATGATGCATCATTTCTTCGACTTCTCAGCATTGAGGATGATATAATACCTATCCCCTCCGTGAGCGGAAGGATTCCTGACGCAGGGACCTCGTTTAACATTTCCACATTACCCGACGGACCCGAAGAGGCGGAAGCTCAAGTTGCTTCGCTGAACGTTCCCTTAATGGGACCTCCTCTCCCGCCTCTACCTGTCGGTCTTCAAGGGGCCAAATCAGAAACTCAAGTCAGGATTGGAGGGAGCGGCTCGCCCCGAGGTAGCCCTAGATCTTCCAAAATGCAAAACGAAAGTTTTCCCTCATACGGCATTTGCGAAGGTCTCACTGAGATAGTTGCCCTCTCGCCATTGGGTCGCTGCCCGGCGGGAGGGCTGCCATGGAAGGAGACTCGGAAGCGAGGAATGAAGAGGTTGTGGTGCAAATTGTTTCGTCAGGTTACGGCTGTCAAGTCGGACGGCGAAAGGTCTGAGGAGCTCTCGCAACAGTACCCACACTTCGGTCCCTCTCTAACTCTTCCGCTCCCGGAGCCACCGCCAGCGCCTTGGCATCCCAATGAGCTGTCACCATCGTCATCAACGTGGCCCACCGTCAGCGTGGCGGACGACTTCGGGGTCAAGACGGACGGTCGAATTTTCCAGTGTGCCGCTTGCGGGAAGCGGTACAAGTGGAAGACCTCATTAACTAATCATTTGAGGATGGAGTGTGGGATAGAACCCCAGTTCCAGTGTCCTGTTTGCAGATATCGCGCTGCACAGAAAGGAAATCTCAAGAGACACTTCGTTGTGGCACACCCGTCATTAGACTTATCCTTATTAGACGCTGCGGCGATGATGTTGAAGGGTCCATGGCGACGTCAGGACTGGTCGTCAGCCCTGCGTGACGCCAACGTGATGTCCCTGCTGGgcgcggaggggggagagggtgatggcatgggggaggaggtgaaggCAGAGGAGGAAGCCGActgggaggatgaggaggaggtcgGTGTTGTTGGCAGTGTCATAGGTGGCGTTCTGGGTGAAGGGACCTCAGTAGTCAAGCCCGGAAATCAAGTATTCGTGCGGAAGAGGAAAACTGCCGTGCCTCCGGCGAGGAGTAGGAAGAGGAAGAGTAGGTCCAAGGGAGAGGCGAGCACTTCAGTAGCCTCCGGCCTCGGCTGGATCCCGCCAGTATGCATCGATGGTCTCTATACGTGCGAACAATGCGGGAGGACCTACAAAAGGAAAGATTCTTTGCGTAGGCATTTGCAGTGGGAGTGCGGAAAAGAGCCACAGTTCCAGTGTCCCTTTTGCCCGCAGCGTTCCAAGAGGAAGGCTCACCAAATACACGAGGATGGAGAGGCAGGGAGAGGAGTTGGAAGATCGGCGCATTGGGGAGAAGGTAATGCTAAACCGCAGTCCCACAGGAGCGAACGTTCCGGATTGGACGGCAGTGCTGGTGGTGTAAAGGTCAAGGCTGAGAGGTCGTCGTCACCCTCGTCTCTGGTGCACTCTTCTCCTCAACCAACAATCTCAGATGGGGACTCAGCATACTACTATACTGCCTCCGGACGCAAGCGACCCAAATCcaagataaagaaaaagaaaggcatAGCTGGAGAGCTGATGGACCGCGTGCACCTGCAACTCCTGCACCCCAGACAGGGGATGGTGGTTGCGGAGACTGACCTGGCCGAGCTAGTAGAGGAAGTGACTGAGGATGATGAGGACGATGTCAAGATAGGCGGGTTCCCAGAAGACATTCATGTGGAGTTTGCGGGAAAGCTTACCAGAGGAAGGACTCCCTACAGCGCCATGTTCGCTGGGAATGCGGAAAAGAACCGCAGTTTCAGTGTCCATATTGCCCTCAGAGGTCTAAGCACAGAATCCATGTGGTGCGACACATACGGAGAGTCCATGAGAATAAAGCATCGTAGCATATGCCTGTGTGTCTCTTCTCCTTGTCTTCCTTTTGGCGCTATGGTGATGGTGCTGCAAAGATTCCTGGAAGGCCAAATTCCTGTCTGCTCCTCGATTCCAAATAGACTAATAGGGCATAGCTTCCAAATGCCCTCGACTCTTGTCCTTGAACATTTAGCTGTGACAGCCGCTGAATGA
- Protein Sequence
- MKWSCFCLRASVAERETDCRKHDQKYSKEQWSPFPFPRTALAPSPPPSSTSSLVPYSSSTVVATHSPLPPSSPTASSLHHGTHPSSPTWAVSPRHPSHHPLASQRPTPGGKQVRRRVVVALLPPDEEEEAPAAPLPHHLFSPHHHHHHHPHRHLTGHPGLFPPLSASYVTSHSSSNASSATTNTSTSPTSKSYACPRCDRRYSVSYTLERHLRYECGVAKQFACPVCLRRFSRRDVLRAHQRKAGHHHHQHHRHHLVPSPTSAASRAVEEAASAVVELPAEVVGSLFSGKEGTTVRPTGECGRRYYTRNSAVINWGTVYCLNSRAVLSGSIQSVIMKVPPKRAFLAVIFIQSCPLSGLFAGGAAETTTVYLDWTTQVGRSSPSPPSPLAAVPTLSSYSRGAYRPSRTCLSPQPHPQSIPPYPLPPLTTAPHLPIRPAVPALPPSMTLSPVFPGPSSGVAERDAGGDPSSPSSRLHPCPRCGRPYKTRSTLNRHLRYECGGAGRRFECPICLKRISRPDTFRQHALIHRSEAAAAGAAMSALLDVEKQEVELGSPPSSSTSIPHSCRTHVGLSRSGCRDVRCGESVQYEGETLGGVGDWLASGGGSDGGWYAADGLGTEGQSTGHTQRVKGRYVCDACGKAYAWVSNLTRHVRLECGKEPQFQCPQCHKRTKHLSNLRVHMRTRHPDVDPFVALGLSPPPIRLGEESFSSELEGFISETRLKDEVGSLDDVQQLSPNNLGLVPPRERFGGMDYSASDFKESSHSFSMACRGSLKPPSDGYWLCDLCGRSYTLKSTLMRHKRLECGKEASFACPFCPARSARASNLARHIRTIHPMIGSLGKIEEQQKNTKRRTVVTRGSVVVSDPYVITSAQTSAEDLKSVPVAHDTRPAFGVAREYIRPPEGLELGWYSGGESCVDSEETIVANMPLVAQNSARVSFSEDLDAAMFCVQVSPSMVVDLAGASPTASPETAPQSQPPQGVLPLVCPSLDDRRDTRGGSDRTHGQQQQAPTQQLPVSYLPYNLTSAPDDASFLRLLSIEDDIIPIPSVSGRIPDAGTSFNISTLPDGPEEAEAQVASLNVPLMGPPLPPLPVGLQGAKSETQVRIGGSGSPRGSPRSSKMQNESFPSYGICEGLTEIVALSPLGRCPAGGLPWKETRKRGMKRLWCKLFRQVTAVKSDGERSEELSQQYPHFGPSLTLPLPEPPPAPWHPNELSPSSSTWPTVSVADDFGVKTDGRIFQCAACGKRYKWKTSLTNHLRMECGIEPQFQCPVCRYRAAQKGNLKRHFVVAHPSLDLSLLDAAAMMLKGPWRRQDWSSALRDANVMSLLGAEGGEGDGMGEEVKAEEEADWEDEEEVGVVGSVIGGVLGEGTSVVKPGNQVFVRKRKTAVPPARSRKRKSRSKGEASTSVASGLGWIPPVCIDGLYTCEQCGRTYKRKDSLRRHLQWECGKEPQFQCPFCPQRSKRKAHQIHEDGEAGRGVGRSAHWGEGNAKPQSHRSERSGLDGSAGGVKVKAERSSSPSSLVHSSPQPTISDGDSAYYYTASGRKRPKSKIKKKKGIAGELMDRVHLQLLHPRQGMVVAETDLAELVEEVTEDDEDDVKIGGFPEDIHVEFAGKLTRGRTPYSAMFAGNAEKNRSFSVHIALRGLSTESMWCDTYGESMRIKHRSICLCVSSPCLPFGAMVMVLQRFLEGQIPVCSSIPNRLIGHSFQMPSTLVLEHLAVTAAE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -