Basic Information

Insect: Calopteryx splendens
Gene Symbol: -
Assembly: GCA_002093875.1
Location: LYUA01000139.1:1174058-1175758[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.01 7.1 9.9 0.2 2 23 29 51 28 51 0.96

2 15 2.1 1.5e+03 2.6 4.7 2 23 56 77 55 78 0.91

3 15 4.4e-05 0.031 17.4 0.9 1 23 82 104 82 104 0.98

4 15 5.1e-07 0.00036 23.4 0.7 1 23 110 132 110 132 0.98

5 15 4.7e-07 0.00033 23.5 2.3 1 23 138 160 138 160 0.96

6 15 0.031 22 8.4 5.8 1 23 170 192 170 192 0.96

7 15 5.3e-06 0.0037 20.2 2.7 1 23 198 220 198 220 0.95

8 15 1.2e-06 0.00084 22.3 1.0 1 23 226 248 226 248 0.99

9 15 0.00012 0.084 16.0 0.2 1 23 254 276 254 276 0.99

10 15 8.3e-06 0.0058 19.6 2.5 2 23 301 322 300 322 0.97

11 15 1.1e-07 7.9e-05 25.5 0.6 1 23 328 350 328 350 0.98

12 15 2.3e-07 0.00016 24.5 0.6 1 23 356 378 356 378 0.98

13 15 0.24 1.7e+02 5.6 5.2 1 23 384 406 384 406 0.97

14 15 2.3e-08 1.6e-05 27.6 0.8 1 23 412 434 412 434 0.99

15 15 1.8e-06 0.0013 21.7 0.9 1 23 440 462 440 462 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.01	7.1	9.9	0.2	2	23	29	51	28	51	0.96
2	15	2.1	1.5e+03	2.6	4.7	2	23	56	77	55	78	0.91
3	15	4.4e-05	0.031	17.4	0.9	1	23	82	104	82	104	0.98
4	15	5.1e-07	0.00036	23.4	0.7	1	23	110	132	110	132	0.98
5	15	4.7e-07	0.00033	23.5	2.3	1	23	138	160	138	160	0.96
6	15	0.031	22	8.4	5.8	1	23	170	192	170	192	0.96
7	15	5.3e-06	0.0037	20.2	2.7	1	23	198	220	198	220	0.95
8	15	1.2e-06	0.00084	22.3	1.0	1	23	226	248	226	248	0.99
9	15	0.00012	0.084	16.0	0.2	1	23	254	276	254	276	0.99
10	15	8.3e-06	0.0058	19.6	2.5	2	23	301	322	300	322	0.97
11	15	1.1e-07	7.9e-05	25.5	0.6	1	23	328	350	328	350	0.98
12	15	2.3e-07	0.00016	24.5	0.6	1	23	356	378	356	378	0.98
13	15	0.24	1.7e+02	5.6	5.2	1	23	384	406	384	406	0.97
14	15	2.3e-08	1.6e-05	27.6	0.8	1	23	412	434	412	434	0.99
15	15	1.8e-06	0.0013	21.7	0.9	1	23	440	462	440	462	0.99

Sequence Information

Coding Sequence: ATGGATCCCAATTTGAAGAGCAAGATTGTGGGCACAATAAAAAAGCTTGTGCGCAGGAGTCGATACCCAGTGCTACGAAACATCACATGCccaatttgcaaaattaaatttctctcggTCACGGCTCTCGAGACTCATCGAAGGATCAAGCATGATGAGCGCTTACCCTGTCGATTCTGCTCCCGGCTATGTCGTTCTGAAGCCGCCTTGAAGAAGCATGAGGCCCACCACCATGCCCAGGAGTTCAGATGTGAGATTTGCTCTGAGGAGTTCAAGTCCCGAATCCTCCTGCGAAAGCACGAGCTGAAACACTTTGGGGACCGCCCCTACCGGTGTGACACTTGCGGCAAGTCTTACACTTCACGCGGGAGCCTTCAGATTCACGTGACGACACACTCAAATGAGAAACCATACCTCTGCGATAAATGCGGCAAGGGTTTCAAACATGTGAGCAACCTGAACGCCCACAAGCGCACCCACTCGGACGATCCCTCGGTGATCAAGGCCCACCACTGTCCCATCTGCAGCAAGCCATTCCGGTGCCAGTTCCTGGTGCGTGAGCACATGAGACTCCACACGGGGGACAAACCATTCGTGTGCGAGCACTGTGGCAAGTCATTCTACAAGAAGCAGCAGCTGAGGCAGCACTCAGCTGTCCACTCGCCCACGCCGCTTTTCAAGTGTGGCATCTGCGGTGCTCGGTTCAACCGCAAGGGGAACATGATGCAGCACCAGAAGCGCCATGGTAAGGAGGGCGTATTCACATGCCGTGTGTGCGGGGAGAACTTCGCCAGCATCGGTCTAGTCCTCCGTCACCGCCGGACACACGGCGAAGAGGAGCTGGATGCAGCAACGGCGGCCGAGGGCGAGGAGCAGGACCCGGAACTCGCCATGGCATGCAAGTGTGACCTGTGCGGCAAGTTCCTCTCATCCAAAGTGTCACTCATGCTGCACATGAGGACACACACGGGGGAGCGGCCTTATATGTGCAGCGTGTGCGGCAAGGGCTTCTCGCAGAGCACGTCACTCAAGGTGCACGAGAGGACGCACACGGGCGAGCGACCATTCTCGTGCCCACAGTGCTCACGGTCATTCTCCTCCCGTGCGGCCCTCACGGTGCACCAGCGCAGCCACACAGGGGAGCGGCCGTACCACTGCAAGGACTGCATCAAATCATTCCGTTGCGCTGCATCCCTGAGGCAGCATTCCTCCACCCACTCAGAGGACCGACCCTATCCGTGTGAATTCTGCGGGAAGAAGTTCCGGCGGAAGGAGGCGCTTGAGATTCACCAGAGGACGCACACTGGGGAGCGTCCGTACAGCTGCAAGGTGTGTGGGAGGAGATTTGTGCAGAAGGGGGATGCTCGCAAGCATGAGCGAACGCACGAGAAGGGCAAGAGGCCCGCTCCCATACCCAAAATTAGTTTCCTAGAAGACTGCTCCGACAGCTATGAACATCAACCCTTGTCGCTGGTGGAGATCACCACAGAAGAAGAAGTTTGCAGTGTAAATGAATGCCCTACAATGCATACCTCCCTTCAAATTGAACATGGGGATCCTTTCTCCAATTTGCCTCCTGGGACAATCATAATCAATGCACAGGATTTGATGACATGTTCATCTGAAATTACAATTGTGGCTGAAGAGAATCTCAACGATCACATATTGGGCAATGGAATTTCGATACACTATGAGGATTAG
Protein Sequence: MDPNLKSKIVGTIKKLVRRSRYPVLRNITCPICKIKFLSVTALETHRRIKHDERLPCRFCSRLCRSEAALKKHEAHHHAQEFRCEICSEEFKSRILLRKHELKHFGDRPYRCDTCGKSYTSRGSLQIHVTTHSNEKPYLCDKCGKGFKHVSNLNAHKRTHSDDPSVIKAHHCPICSKPFRCQFLVREHMRLHTGDKPFVCEHCGKSFYKKQQLRQHSAVHSPTPLFKCGICGARFNRKGNMMQHQKRHGKEGVFTCRVCGENFASIGLVLRHRRTHGEEELDAATAAEGEEQDPELAMACKCDLCGKFLSSKVSLMLHMRTHTGERPYMCSVCGKGFSQSTSLKVHERTHTGERPFSCPQCSRSFSSRAALTVHQRSHTGERPYHCKDCIKSFRCAASLRQHSSTHSEDRPYPCEFCGKKFRRKEALEIHQRTHTGERPYSCKVCGRRFVQKGDARKHERTHEKGKRPAPIPKISFLEDCSDSYEHQPLSLVEITTEEEVCSVNECPTMHTSLQIEHGDPFSNLPPGTIIINAQDLMTCSSEITIVAEENLNDHILGNGISIHYED*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00797272;
90% Identity: -
80% Identity: -