Basic Information

Gene Symbol
NCOR1
Assembly
GCA_002093875.1
Location
LYUA01000410.1:190873-191703[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.7e-09 0.00011 24.8 0.0 3 43 48 88 47 90 0.97

Sequence Information

Coding Sequence
ATGGAGGATAAGAAGATGCGATCGTATGCCGTCATACCTCCCATACTCTTGGATGCCAAACAGCGGAAGTTGACTTACCAGAATAACAATGGACTCATAGAGGACTTTGTGGCAGAATATAAGGAGCGACAGCTGCTCAATGTTTGGACCGATCAGGAGCGGGagatatttcgtgaaaaatatctCCAGCATCCGAAGAACTTTGGTCTTGTTGCTTCTTACCTAGAACGTAAAAGTGTGTGCGACTGTGTCCAGCATTACTACCTCTCAAAGAAAACGGAGGGTTACAGGCAGCTGCTCAGGAAGTCTAGACAAAGGACTAGAGCTTCCAGGAACCCTCAAAAGCCTACGGCTGCGGGTGGTGGGGGGGCCGGTGCAGGTCTAGCGGGGGGAGCCGGTGGTGCCGGTGACCCTGGCACGACCGGGGTCACGACCAGGCAGTCGGTGGCTGCGTTGCAACGTGAGCAGCAGCAACGCGAGTTGCGAGAACAGAGACAACAGCAGCAGGAGAGGGAGCGTGAACATGGCGTCTCGGATAGCATGTCAAATTCCATTGTCCCCCGTGAGCCCTCTCCAATCCCCTCGACCAGTGTGTCCCAAACGAACACGGTGGAAGGCGGCAACAGCGCCACCACGATGGCGCCATCTGCAGGGAGTTCGACGATGGTGTCCATTGGTGGTTCAATGGCTCCTTGTTCGGCCGGTGGCTCTGGGATACTCTCGCCTTCCAATTCGTCAGCGGGCGTGCAGCCTGCGACCAGTCTGTGTTCCATTCTTAAGGAGGGAGTTCCTGACAAGGAAATggataaggaaaacaaaagtggCAGGTGA
Protein Sequence
MEDKKMRSYAVIPPILLDAKQRKLTYQNNNGLIEDFVAEYKERQLLNVWTDQEREIFREKYLQHPKNFGLVASYLERKSVCDCVQHYYLSKKTEGYRQLLRKSRQRTRASRNPQKPTAAGGGGAGAGLAGGAGGAGDPGTTGVTTRQSVAALQREQQQRELREQRQQQQEREREHGVSDSMSNSIVPREPSPIPSTSVSQTNTVEGGNSATTMAPSAGSSTMVSIGGSMAPCSAGGSGILSPSNSSAGVQPATSLCSILKEGVPDKEMDKENKSGR*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-