Cspl115070.1
Basic Information
- Insect
- Calopteryx splendens
- Gene Symbol
- -
- Assembly
- GCA_002093875.1
- Location
- LYUA01006502.1:12622-15750[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1e-07 0.0015 20.8 0.0 3 38 24 58 22 63 0.93 2 3 3.7e-08 0.00055 22.2 0.0 2 40 158 195 157 198 0.94 3 3 0.021 3.2e+02 3.8 0.0 16 29 224 237 216 243 0.84
Sequence Information
- Coding Sequence
- ATGTCCCGGCACGACTGTGGTACGGACGACTACAGTACGGTGGTACCCCAACTCGGCAGGTACGCGAAGGAGGATCTCCGGAAGGCTCTGGAGGAGGTCCGAAATGGGAATCTGATCCGTGTGGTCGGCAGAGCTTACGGCATACCGGAGTCGACGATACGACGTCACCTACAGAAGCCGGCTCAGAACGGAACGGTGGCGCTCAGCTACGCACAGGAGAGGAAGCTGACCTGCTACGTCATTAAACTGAGGGATTCTGGGAAGGTCCTGGACCCTAGGAAGCTCCGAAGCCTCGCTCACCGGTACCTCCGGAGTCAGGGAATTCCATGTGTGTTCGGTTCGTCGCAGACAAAGGAAGGCAGGGATTGGTTCGACCTGTTCCTGGAACGATTGTCTACTGGATGTTCTGAGAAGGTCAGGGCTCACGTGAAGGGTTCGAGGAGGTTCCCCGTGTGGAGGAACGGATACGCGGAAGGAGAGATGCTGAAGGCTGTCGATGCTGTCAAGGCGGGCGCTTCAATCAGGAAGGTCGGGAGGGAAATGGGGATCCCTGAATCATCTCTTCGGCAGAGGTTAAAGGGTTCAAGGTCCATTGGTctagggagagggaaggggaagcgATTGCGGTACACTGAACGGTTCAAGCAGATGGTGGTCCAGTACGCCAACCAGACTAGCGCCCACCTGGCATCAGAGCATTTCGGCATCCCTGGACGAAACGTCCGTCGCTGGAGGCTCCAGTCGAGGAAGAAGGGGGGCAGGAGATACATTCCCACCCTGGTGCCGTCCAGCATATGCCCCTGA
- Protein Sequence
- MSRHDCGTDDYSTVVPQLGRYAKEDLRKALEEVRNGNLIRVVGRAYGIPESTIRRHLQKPAQNGTVALSYAQERKLTCYVIKLRDSGKVLDPRKLRSLAHRYLRSQGIPCVFGSSQTKEGRDWFDLFLERLSTGCSEKVRAHVKGSRRFPVWRNGYAEGEMLKAVDAVKAGASIRKVGREMGIPESSLRQRLKGSRSIGLGRGKGKRLRYTERFKQMVVQYANQTSAHLASEHFGIPGRNVRRWRLQSRKKGGRRYIPTLVPSSICP*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -