Basic Information

Gene Symbol
ct
Assembly
GCA_002093875.1
Location
LYUA01003111.1:43807-51691[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.4e-32 1.6e-27 97.9 0.0 3 77 460 535 458 537 0.96
2 2 2.9e-31 8.7e-27 95.6 0.1 3 76 786 860 784 863 0.96

Sequence Information

Coding Sequence
ATGGGTGTCCTTATGAGTCGCTTTACCGACTTTGTCCGCACCAGCCTCTTACTGTGGGAGGAAAACGAGGCAATTGATAGATTTGCTGTTCGTAAAGACACTGCTGGTATTCCCGGCTTTGGAGCACCCCGCGGAGGTGTAGGCGGACTAGGAGAAGATAGCATGACAGAAGAGAGAATAGTTCACATCTTGAATGAAGCTAGCCATGCAATGAAAACGGCCTCTGCATCACTACACGGTGTCGTGTTGGGGGGCGTTGGTGGCGGAAACGGCGGCGGAGGAGGGCAGGAAGATAGCCGGAGCAACGAGGATAGCAAGTCACCGCACCATGGACAGaGCTCTTCGCCTCTTTTGTCCGGAAACGGCTCCGGAAAGGACGGCTCGAGCTCCCAAAACAGGCGTCTCAAAAAGTACGAAAACGATGACATTCCCCAGGAGAAGGTCGTCCGCATATATCAAGAGGAATTGGCGAAATTGATGGGCCGCAGGTTGGAAGACTCCATGCGCAGTCCCAGAGACCACCATTTTCCTAGTCTGCTCTTCCCACACTTTTTCAGCGGCGCTGGTGGACCAGGAGGCAACGGCGGAGGTGGTGGCAGTACGGGCCACCCGCTGATGGACCGCACCCAGGAGGAGATCCGAATGGCCTTAGATGCTTACCACCGCGAGCTCGTCAAGTTGAACGTGGCCCCACCTCCCCCATCCTCGCCGTCCTCCGTTGGCGGAGGCCCAGgcctcccccacccaccgcccccaTCATCCGCCCCCTCGCCCGCGTCATCGTCCGCCGCCATGGCGACCACGACCAATTCGATCGTGTCGCAGGCGGGCCTGCTTGCCCTGCATCAACAGCATCAGCAGAATATGCAGGGCCACAACGGGATGGCACAGGACCTCTCCCTTCCCAAGATACCCAACGGCGGTCTCGAAGGCCCGGGTATGGGGCTGGTGAAGAAGGAGCAACACATGCAACAACAAGCAGCAAATGAAGCTTTGAGACATGCAGGAAGTGCTTTCTCACTTGTCAGACCAAAAACTGAGCCAGGCTTACCTGGTTCAGGATCTCAATCagctggtggtggtggaggtggtcaAGGGGCATGTGGCTCTACACCAGGAGCTAGTCCTCTTGGAGGtggtgtccctccctcccctgcccctccAACACCCTCTTCACTTTTGGTGGGTGTAGGCGCTGAAGACTTTGGACCATCTTCCTTGGCATCAACTGGTGCTAGTCCCTTACAACGGATGGCCTCTATCACTAATGCTCTCATATCAGCTCCAGTAGTCCCAAGCCATGTGCATGGCAGTCCGTCCCAAAGACCACTCAAGGCAGTACTTCCCCCAATAACCCAGCAACAGTTTGACCAGTTCAATAACCTCAACACGGAGGATATTGTCAAGAAGgTTAAGGAACAGCTAAGCCAGTACTCAATAAGCCAGAGGCTATTTGGAGAATCAGTTTTGGGTCTGTCTCAAGGTTCAGTGTCTGATCTCTTAGCAAGACCAAAGCCTTGGCATATGCTAACTCAAAAGGGCCGTGAACCATTCATCCGAATGAAGATGTTCTTGGAGGATGACAATGCAGTGCACAAACTAGTTGCTAGCCAGTACAAGATTGCCCCAGAGAAGTTGATGAGGACTGGCGGATATGGTGGAAGTCCCCGCCCGACCAAGCCGCTGTCAAAGCTGTCGGCTGCAATGCCTCCTTCTGGTATGGATCCAGTTTCTAAGGCCATGGATGCTGTTGTGTCatcttcaccctcctcctcagCTGTTCTCTCGGCTGTGGTTGCAGCTGGCCAgatggcagcagcagcagctgctGCTGCAGCCATGCACCATGGTGGAGGAGCTTCATCAACACCCTCCCATCCGGACACCACAACTTCTCCATCAGCCCTGCTCAAGAGAGGGGGACATCATCATCACCCACATCTACCACCGCACCATCCTCATCACCATCCATTGCAGGGTCCTCCACCACATTCCCCCCTACATCATCCACACCTAGGCCCTCATGGCCCTGGGATGCCTCCAGGAGTGCCCACCTCAGCTGCTGGGCTTCTTGTATCGCCTCCCCCTGGTATGGGTATGAGGTCAGCCTTGCACCATGTTCCACATCCAATACCACCACCCACCCCACAGCAGATGCAACAGCCTCTGCATCcatcatcatcagcatcatcCAGTCCTTCAACGACAGCACCACCCACTGCAAGTTCCCTGGTGTCTCCTCCAGTACCTCCAACATCATCTTCAACCACTCCTTCATCAGCACATCATCCCCATCCTCAccatcctcatcatcatcatgttcAGCCCAGTGTGTATGAAATGGCTGCCCTTACTCAAGACTTGGACACTCAACAAATCACTACAAAGATCAAGGAGGCCCTGCTAGCCAACAATATTGGACAGAAGATATTTGGTGAGGCTGTTCTGGGTCTCTCTCAAGGATCAGTTAGTGAGCTCCTTTCTAAGCCAAAGCCATGGCATATGCTCAGCATCAAGGGCCGTGAGCCATTCATTCGCATGCAGCTTTGGCTCAATGACACGCACAATGTGGAGAAGCTCCAGCacctgaaaaatgaaagaagggaagCAAACAAGAGGAGGCGGGGAAGTCATCATGGTAGTGGAGGCTCCGGGGGGCCTGGTGGGTCAATGGGGTCTGGTAGTGTTGCTGACAATGGTAGTGATACATCTTCCAATGACACAACAGACTTCTACCATGCTGGACCAGGAAGTCCAGTTGGGAATACATCCGGAGTACCAGGAAGCAGTCCTGGATTGCCAGGAGGACCTGGGGGTGTCAGCACTCCCCCTGGCACTTTGAGTCATCACCACAACTTCCTTCACCACCAGCAGGCGCAGTCACAAATGCTGGGAAGTGGAGGCTGTGGTCCACCATCAGCAAAGAAGCAAAGGGTCTTATTCTCAGAAGAGCAGAAGGAAGCTTTGAGGCTTGCCTTTGCCCTGGACCCTTACCCAAATATGACAACAATAGACTTCCTGGCAcaggaactctctctctcttgccgcACCATTACAAATTGGTTCCACAACCACAGGATGAGGCTGAAGCAGCAGCCTACTGCACCCAGCCAGTCCTCACCAGCCCAGGAAGGAAGTTTAAACAGCCGTGGACCTCAGTCAGGCTCTCCTGtacctcctccaccaccaccctctttGCCACCTCCTCCGCCATCACCATTTGATCCTGTCCAGTTCCGACTCCTCCTCAGCAGGAGACTGCTAGATTTGCAGAAGGATAGGGGGAGCAGCAGCAATACAGGAGTTAGTGGTAGCTTAGTCCCAccctcatctctctccttcccatatTTTAACGCAGCTGCGGCTGCAGCGGCGGCCGCAGCAGCAGCGGCTGCAGCAGCTGCTGCTCACCATGCTTCTGGTTCAGGCTCATCAGTGGAGAAAGAAGAGCAAGTGAGTGGATTAGATTTGAGCATGTCTTCTCTCAAACGTGAGCCAATGGAAtttgatgatgacgatgatgacgacatgattgatgatgatgaggatgaagATGTGGCAATGGATGCAACAATGACACTCCCCTCAATATCTGCGAGTGACGTGTCTGATCTTTCCATGAAAGTTGAACCAGACTCTGGAGCTGTAGAATCAGAACTGAGACCTCCAGTTCGATCAGCTCCACCACAAACAGTTCAATCAGGTGGCAGGTCTTCTCGCAGAAAGCCTGCAGCACCTCAGTGGGTTAACCCAGAGTGGCAAGAGGTGGCAGATGTGGGAGGAGTAGGAATGAGGGGGGTTGGCACTGGGAGCagagaagagaaaagggaagtTATAATTAATGGTGTCTGTGTCATGCAAACAGATGCCCCATTCAGTAGTGCAAGTGCTGGTGTTAGTTCAGGAGTGTCACCCGGGAATGtgatagaagatgaggaggaggaagatgaggaagatgatgaagatggtCCAGTGGATCACACTGTGGTTGGTAGCGATGAAGGACAGGAGTTGGGATCAGGGCGAGATGAAGATGAGCCCATGGATGAGTCAGGTGGTGGCGAGGGTCAGGGGGGTGAAAACCTTGAGGCACAGTCAGCTGAAAGAACGGGTGAAGTGGATGAGGAATCTGTGGCAGCCGAGAGCCCAAGGCACCCATGTAGGTCAGATGACGGTGTGGGCGGTGGTGATGAGGAGGAGGGTAAGGGCGGTGAGAGTGATGGGGATGCAGTGCTGGGTGGCAACAACCCATCTTCGACTAGGGAGGACAGGATTGGTGGCCCCCTTATGAGTGACAGTGGATGTGCTGACGAAAGGGGAGTGACGTGTGTTGAGGGTGGTGCAAAAAGGTCGACCGAATTACGggacgatgatgatgaagctGCAATGGAGGAGTCTTTGGAGAAACTCCAGAAGAGGATGAaacgggaagaggaggaagaagaggaagactgGGAGTTTTGA
Protein Sequence
MGVLMSRFTDFVRTSLLLWEENEAIDRFAVRKDTAGIPGFGAPRGGVGGLGEDSMTEERIVHILNEASHAMKTASASLHGVVLGGVGGGNGGGGGQEDSRSNEDSKSPHHGQSSSPLLSGNGSGKDGSSSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRLEDSMRSPRDHHFPSLLFPHFFSGAGGPGGNGGGGGSTGHPLMDRTQEEIRMALDAYHRELVKLNVAPPPPSSPSSVGGGPGLPHPPPPSSAPSPASSSAAMATTTNSIVSQAGLLALHQQHQQNMQGHNGMAQDLSLPKIPNGGLEGPGMGLVKKEQHMQQQAANEALRHAGSAFSLVRPKTEPGLPGSGSQSAGGGGGGQGACGSTPGASPLGGGVPPSPAPPTPSSLLVGVGAEDFGPSSLASTGASPLQRMASITNALISAPVVPSHVHGSPSQRPLKAVLPPITQQQFDQFNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGSPRPTKPLSKLSAAMPPSGMDPVSKAMDAVVSSSPSSSAVLSAVVAAGQMAAAAAAAAAMHHGGGASSTPSHPDTTTSPSALLKRGGHHHHPHLPPHHPHHHPLQGPPPHSPLHHPHLGPHGPGMPPGVPTSAAGLLVSPPPGMGMRSALHHVPHPIPPPTPQQMQQPLHPSSSASSSPSTTAPPTASSLVSPPVPPTSSSTTPSSAHHPHPHHPHHHHVQPSVYEMAALTQDLDTQQITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDTHNVEKLQHLKNERREANKRRRGSHHGSGGSGGPGGSMGSGSVADNGSDTSSNDTTDFYHAGPGSPVGNTSGVPGSSPGLPGGPGGVSTPPGTLSHHHNFLHHQQAQSQMLGSGGCGPPSAKKQRVLFSEEQKEALRLAFALDPYPNMTTIDFLAQELSLSCRTITNWFHNHRMRLKQQPTAPSQSSPAQEGSLNSRGPQSGSPVPPPPPPSLPPPPPSPFDPVQFRLLLSRRLLDLQKDRGSSSNTGVSGSLVPPSSLSFPYFNAAAAAAAAAAAAAAAAAAHHASGSGSSVEKEEQVSGLDLSMSSLKREPMEFDDDDDDDMIDDDEDEDVAMDATMTLPSISASDVSDLSMKVEPDSGAVESELRPPVRSAPPQTVQSGGRSSRRKPAAPQWVNPEWQEVADVGGVGMRGVGTGSREEKREVIINGVCVMQTDAPFSSASAGVSSGVSPGNVIEDEEEEDEEDDEDGPVDHTVVGSDEGQELGSGRDEDEPMDESGGGEGQGGENLEAQSAERTGEVDEESVAAESPRHPCRSDDGVGGGDEEEGKGGESDGDAVLGGNNPSSTREDRIGGPLMSDSGCADERGVTCVEGGAKRSTELRDDDDEAAMEESLEKLQKRMKREEEEEEEDWEF*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00797072;
90% Identity
iTF_00797135;
80% Identity
iTF_00261216;