Basic Information

Insect: Callosobruchus maculatus
Gene Symbol: -
Assembly: GCA_900659725.1
Location: CAACVG010006570.1:185435-207525[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.5 1.8e+02 3.0 0.2 2 23 305 327 304 327 0.91

2 14 5.5e-05 0.0039 17.7 0.1 1 23 385 408 385 408 0.96

3 14 0.035 2.5 8.9 1.1 1 20 414 433 414 435 0.93

4 14 0.00055 0.039 14.5 4.6 1 23 525 548 525 548 0.96

5 14 0.019 1.3 9.7 2.6 2 23 555 577 554 577 0.95

6 14 0.00047 0.033 14.8 2.7 1 21 673 693 673 694 0.96

7 14 0.0031 0.22 12.2 1.0 2 23 706 728 705 728 0.91

8 14 0.87 61 4.5 0.7 1 23 731 754 731 754 0.95

9 14 1.3 90 3.9 0.9 2 23 760 781 759 781 0.94

10 14 0.34 24 5.8 0.2 2 23 815 837 814 837 0.90

11 14 0.041 2.9 8.6 0.5 2 23 846 868 845 868 0.94

12 14 1.1 75 4.2 0.4 3 19 875 891 874 892 0.97

13 14 2.8 2e+02 2.9 3.2 2 23 1034 1056 1033 1056 0.95

14 14 0.45 32 5.4 0.9 1 23 1098 1120 1098 1120 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.5	1.8e+02	3.0	0.2	2	23	305	327	304	327	0.91
2	14	5.5e-05	0.0039	17.7	0.1	1	23	385	408	385	408	0.96
3	14	0.035	2.5	8.9	1.1	1	20	414	433	414	435	0.93
4	14	0.00055	0.039	14.5	4.6	1	23	525	548	525	548	0.96
5	14	0.019	1.3	9.7	2.6	2	23	555	577	554	577	0.95
6	14	0.00047	0.033	14.8	2.7	1	21	673	693	673	694	0.96
7	14	0.0031	0.22	12.2	1.0	2	23	706	728	705	728	0.91
8	14	0.87	61	4.5	0.7	1	23	731	754	731	754	0.95
9	14	1.3	90	3.9	0.9	2	23	760	781	759	781	0.94
10	14	0.34	24	5.8	0.2	2	23	815	837	814	837	0.90
11	14	0.041	2.9	8.6	0.5	2	23	846	868	845	868	0.94
12	14	1.1	75	4.2	0.4	3	19	875	891	874	892	0.97
13	14	2.8	2e+02	2.9	3.2	2	23	1034	1056	1033	1056	0.95
14	14	0.45	32	5.4	0.9	1	23	1098	1120	1098	1120	0.95

Sequence Information

Coding Sequence: ATGGAAACTAAATTGTGCAGACTATGTGGTAAAATAGGGCaagattttttacaaatattcaATACTGATGGACTCAAGAATAAAATCGAAACATGTTTGCCTATGGTTATATCACCACACTCTCTCCTACCTGATGCAATTTGTGAGAAATGCACAGAAAATATCAATAGTTTCCACCAGTTTATTAAAATTTGCTTACAGAACACAATAATTCTTGAATCACAGTATAATATACAGGAATCTTGTTTGAAATCTAAGCAAAAGAAAGATAAGGGTTGTATGGTTGATCTCACTTACATGACTAGTAATAAAATCAACCAAACTGATGACTTTTTAGATGTGATATCTGGTAAAAATGACAATTTGAAAGTATATAGTAATATTCTTCCAGGAACGCTTAAGTATTTGGATAATGCAATTCCTCTTTCAAGTGTCACAAGTACTCATTTAGTAGATTATGATATTGAATCTGATTCTCAGCCTGAAAGTGATAATGAGGGTATTGTCATTTTGGGTGAAAAGCTACAAACTCTAAATAAGATTAATAGATTAGTTGATTCTGTAATATTTAATCCAAAGAATTTATCTAAAACTAGATACTCAGACAATGTTGAAAGTAAATTGATTAGTGAGATTTCTCAAAGAaagtatttaaaaagaaaaaatgattttatcgaACAAAGTAAGCCTAAGATATGTAAATGGGATAGTacaaatagaaggaaaaataaaattccTAAGAAACTAGACATTACAGAGACTGTGATAGAAAAGTCAAACCTACAATCTAGTGGTGATTGTACTTTGGATAAAATTAATGATAGTGAACAGAAAAGTGATGTGCCATATAGTATTACTGAGAATGCCAGAACCTTGCAAGTTAACCAAGATTTAATGAATATGTTGGCTCAGAAATGTCTACTTTGTGATAGCCATTACAATGAACCTGCATCATTTGTAGCTCATATTTTTGAGGCTCATGGCTTTGACATGACTGGAGTATCCATGTTTGGCAATAATGAATGGATTGCTGAAaagaataaaaagaaaataccaaacctgttgaaaatttcagatttgAAGAAAAGTGATATTATTGAAAACAATCAACTCAATGAAGACCAGTCATCACAAGAGCAGGAAATATTAAGATTTAGATGCTCAGACTGCCCTGCAGCATTTACTGATAACCAGGATCTCTTGCAACATATCCAGTTAGCACACCTCAAACTTACTACCCACGTTTGTGGAATTTGCTCACATGAATGCAGCTCATTGTCATCCTTGCAAGAGCACCTTGTGACCTGCTGTGAACAACTTCAGAAGAAAGCGACAAAGTACATTTGTCGGATATGTTGCTTCGGAGATGACAGCTTCAGAGATTTAGAAAAGCATGTGTTGGTCCATGACTTTCTGATTGACATTTGTAAGAAGcaaatgaaaatatttgatcCTGCAGATTATGTAGACTGTCTTGGCAATGTGTCAAACTTTTCATGTACAGAATGTGGCTCAAGCGACTTTGGAAGCTTCAAGGAATTTAGCTGTCATAGGAGGGACAAACATCACATATTCCACTGCGATCTCTGCAACAAGTTTTATGGTCGCAACTCGCACTTGTGGAAACATGTGAATAGGCTGCATAAAGGTCATCCTAGCATAACGTGTCAGGTATGCTTCAAAACCTCTGCCTCAAAGTACCATCTTGTGCAACATTTTAATAAGATGCATGCGAAAAATACAAAACCAAAGAACATAGACGTCAACTTGAACGAAGGAGAACAAACGcagcattttttcaattttcaatgttCCAAACCAACATTCATCAAGCAGGAAGAAAAAAACACCAGCGAAAACGAAGATTCAACTGACTATTCAGATCAAGAAGAATTGATGCTGCAAGGTTGTGAGATTAAGCAAGAGATAAAGGAGGAACCCAAAGAAATTGACTCTTCCCATGACCTCTACACAAATATCATCACCAACTATACCCCACCTCAAAATGAAGGGGATTTCAAATGTCCCAAATGTTCAAAGGGATTCTATAAAAAAATGCTGCTGAAAAAACACAGGAAGAACTGTCGTCCCAAGTTGCAAAAGGATCTCTTGACAAGGTGTAAATCATGTGCAAGGGTATTCAAAGATAGAGTCAGTTTGACCAAGCATCTAGTCAACTACCATTCAGAGTATGTGTGTGAGATATGTAGCCAAAAGGCACAAAGTAAGTGTGAAATTGTGGCACACATACGTTTCCAGCATCCAAACAGCAACCTTGTTTGTAAAATATGTAACAACATTCTGAGGTGTGAGGAAGATCTACGGGAGCACCTGAGAAATCACGTAGATTCTTACATTTGCCAGTTCTGTGCTGATCCCCTGCCTAGCAAGATAAAACTGAAGATGCACATCCTGAGCCTCCATCGGAAGATCTTGAGTCTCTCTTGTGGCATTTGCTTGAAGCTTTTCGAAACGCAACATGTCCTGAAGGATCATGTAGGAATAGCTCACAAAGATGAATTGACACCGCTAACGTCATGTCCAGTATGCGGGAAAAACTACGGTTCCAAATGGAAGACGTATGACCATTTGAACAAGTCCCATGGAAGGATCTTCAGGGCATGCAAGACATGCTTGGAGGTGTTTGATAACGACGCTCAGCTGCAAGCACATTGCGACGTCACATCCCATAGTCAAGGTGGAAATGTGAATGGTGCCATGAATTTCCTGAAAAGCAGCATGCTGTCTTTGATGGGCGTTACTGTGAAAGAGGAGCAGAACGAAGATTGTAGCGACATCGAAGAAATGGAAGAGAGCAACGAAAGTAACGTCGAGTCAGAAAACGAAGAAGAAGCCGCTTCAAATGTTCAGTTCACGTTACCGCAAAACACGAAAATATGCCTTCTGGAAAAACGGCTTCTGGGCAAACCTTTGGCCAAACCAGATTTGAGCAACAAGCCGAACACTCCTAAAAGCGCAAATGTATTCGAAACCAAAAAGGAACCTGTACCTGCGAAACGAGAAGAAGAATCGGAGCACTCGAATCCATTAGTGAACTCTTCCAAAAGAACGGTGTACGTAAATAGCAACGACCCGTCTCGTTGTGAGATCTGCTTCAAGACGTGGCCTGCGAAGAAGCACCTGTGGCAACACTACATCCGATGCCATAAGGCAGAGGCCGCTACCGTCTGCGGTATATGTCTGAAGATGAACGAAAGTTATGCTGTTTTGCAAGAGCATTTGCAACAGAATCACCCCACGCTGTTACATGGACAAGGGTTCGGGTCAAAGTTCATCTGCAGAATTTGTGGAAGGTATCACAACGCTAGCTCCAAACTTCGCCTTCACATGGTCATCCATGAAAACTTCGATTGGAAACTGATAGAGAATGTCACCAGTCACAACAAATCAAACGAAAAAATCGACAAACCGCCAACGAACGGTCTGAAAGATTGCAAAAAAGAGCCGAAGATGTACGATGACAACGACATCAACTACGACAGTCTTATAGAGCAGGTCGAGTGTTCTTCGCAATCTGCCGAAGGAGATTCCGATGATGAACGTTCGAAGATGGATAAGAGAGACGGATCTTCTTCTAATGAAAATGAAGATACCAACGATTCGACGGAGTCTACGAACTGTTTGCCGAATGGGAAGGTGAATGGTGGTAGGTCTCAGACGTCATCAAGCGAAGACTCTAGCAGTAGCTTTTCTGACAACGAAGCAGGTAGCAGAACTGGAACCTCGGTTGAAGAATCCGCCTCTGAATCGCAATCATCCCAAATGAAGAAGAATTCAGATCCCATCACTGTTGACTCGAGATCTTCCAGTCTGTTTGAGCGTAAATCTGAAGAACTTGACTCTGCAGTCAAGTCTATCAGCTACGAAACTGTAGATCAGGTCGAGTTGGTCGGGGAGGATGATGTGAATATGTTACCAAACTGTCTCAATGATAATGAGATCGAATCAGCTGTAGATAGCATACTTTAA
Protein Sequence: METKLCRLCGKIGQDFLQIFNTDGLKNKIETCLPMVISPHSLLPDAICEKCTENINSFHQFIKICLQNTIILESQYNIQESCLKSKQKKDKGCMVDLTYMTSNKINQTDDFLDVISGKNDNLKVYSNILPGTLKYLDNAIPLSSVTSTHLVDYDIESDSQPESDNEGIVILGEKLQTLNKINRLVDSVIFNPKNLSKTRYSDNVESKLISEISQRKYLKRKNDFIEQSKPKICKWDSTNRRKNKIPKKLDITETVIEKSNLQSSGDCTLDKINDSEQKSDVPYSITENARTLQVNQDLMNMLAQKCLLCDSHYNEPASFVAHIFEAHGFDMTGVSMFGNNEWIAEKNKKKIPNLLKISDLKKSDIIENNQLNEDQSSQEQEILRFRCSDCPAAFTDNQDLLQHIQLAHLKLTTHVCGICSHECSSLSSLQEHLVTCCEQLQKKATKYICRICCFGDDSFRDLEKHVLVHDFLIDICKKQMKIFDPADYVDCLGNVSNFSCTECGSSDFGSFKEFSCHRRDKHHIFHCDLCNKFYGRNSHLWKHVNRLHKGHPSITCQVCFKTSASKYHLVQHFNKMHAKNTKPKNIDVNLNEGEQTQHFFNFQCSKPTFIKQEEKNTSENEDSTDYSDQEELMLQGCEIKQEIKEEPKEIDSSHDLYTNIITNYTPPQNEGDFKCPKCSKGFYKKMLLKKHRKNCRPKLQKDLLTRCKSCARVFKDRVSLTKHLVNYHSEYVCEICSQKAQSKCEIVAHIRFQHPNSNLVCKICNNILRCEEDLREHLRNHVDSYICQFCADPLPSKIKLKMHILSLHRKILSLSCGICLKLFETQHVLKDHVGIAHKDELTPLTSCPVCGKNYGSKWKTYDHLNKSHGRIFRACKTCLEVFDNDAQLQAHCDVTSHSQGGNVNGAMNFLKSSMLSLMGVTVKEEQNEDCSDIEEMEESNESNVESENEEEAASNVQFTLPQNTKICLLEKRLLGKPLAKPDLSNKPNTPKSANVFETKKEPVPAKREEESEHSNPLVNSSKRTVYVNSNDPSRCEICFKTWPAKKHLWQHYIRCHKAEAATVCGICLKMNESYAVLQEHLQQNHPTLLHGQGFGSKFICRICGRYHNASSKLRLHMVIHENFDWKLIENVTSHNKSNEKIDKPPTNGLKDCKKEPKMYDDNDINYDSLIEQVECSSQSAEGDSDDERSKMDKRDGSSSNENEDTNDSTESTNCLPNGKVNGGRSQTSSSEDSSSSFSDNEAGSRTGTSVEESASESQSSQMKKNSDPITVDSRSSSLFERKSEELDSAVKSISYETVDQVELVGEDDVNMLPNCLNDNEIESAVDSIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -