Cmac001678.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Callosobruchus maculatus
Gene Symbol
-
Assembly
GCA_900659725.1
Location
CAACVG010001960.1:58694-75318[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 43 0.012 0.82 10.4 4.4 2 23 33 54 32 54 0.96
2 43 0.014 1 10.1 5.4 1 23 135 157 135 157 0.98
3 43 0.003 0.21 12.2 0.7 2 23 165 187 164 187 0.94
4 43 0.018 1.3 9.8 2.2 1 23 199 221 199 221 0.98
5 43 0.0016 0.12 13.0 1.3 3 23 234 255 233 255 0.92
6 43 0.017 1.2 9.8 3.6 1 23 267 289 267 289 0.97
7 43 0.003 0.21 12.2 0.7 2 23 301 323 300 323 0.94
8 43 0.13 9.2 7.1 3.9 1 23 335 357 335 357 0.97
9 43 0.0025 0.18 12.5 0.6 3 23 370 391 369 391 0.92
10 43 0.0023 0.16 12.6 3.1 1 23 437 459 437 459 0.98
11 43 0.014 1 10.1 5.4 1 23 540 562 540 562 0.98
12 43 0.00015 0.011 16.3 1.3 2 23 570 592 569 592 0.95
13 43 2.2 1.5e+02 3.2 5.2 1 23 604 627 604 627 0.97
14 43 0.11 7.8 7.3 0.5 3 23 639 660 637 660 0.90
15 43 1 74 4.2 2.9 1 23 672 695 672 695 0.96
16 43 0.027 1.9 9.2 1.8 3 23 707 728 705 728 0.90
17 43 4.6 3.2e+02 2.2 5.1 1 23 740 763 740 763 0.96
18 43 0.00082 0.058 14.0 3.0 1 23 822 844 822 844 0.98
19 43 6.2 4.4e+02 1.8 5.3 1 23 851 873 851 873 0.98
20 43 0.1 7.3 7.4 5.0 1 23 932 954 932 954 0.98
21 43 4.4 3.1e+02 2.3 2.8 3 23 963 984 962 984 0.91
22 43 0.83 59 4.5 4.3 1 23 996 1019 996 1019 0.97
23 43 0.039 2.7 8.7 1.2 3 23 1030 1051 1028 1051 0.92
24 43 0.21 15 6.4 4.2 1 23 1063 1086 1063 1086 0.97
25 43 0.028 2 9.2 0.7 3 23 1097 1118 1095 1118 0.92
26 43 7.6 5.4e+02 1.5 2.8 1 23 1130 1153 1130 1153 0.95
27 43 0.033 2.3 8.9 1.6 5 23 1168 1187 1164 1187 0.94
28 43 0.24 17 6.2 3.6 1 23 1199 1222 1199 1222 0.97
29 43 2.8 2e+02 2.9 4.7 2 23 1233 1255 1232 1255 0.93
30 43 2.3 1.6e+02 3.1 6.6 1 23 1267 1290 1267 1291 0.95
31 43 0.00081 0.057 14.0 0.3 3 23 1302 1323 1300 1323 0.92
32 43 2 1.4e+02 3.3 4.7 1 23 1335 1358 1335 1359 0.96
33 43 0.018 1.3 9.7 0.2 1 23 1367 1390 1367 1390 0.92
34 43 0.072 5.1 7.9 2.0 1 23 1402 1425 1402 1425 0.93
35 43 0.051 3.6 8.3 0.9 3 23 1437 1458 1436 1458 0.92
36 43 1.8 1.3e+02 3.5 4.7 1 23 1470 1493 1470 1493 0.96
37 43 0.012 0.83 10.4 0.7 3 23 1505 1526 1503 1526 0.90
38 43 0.84 59 4.5 5.2 1 23 1538 1561 1538 1561 0.96
39 43 0.23 16 6.3 3.0 3 23 1573 1594 1571 1594 0.92
40 43 0.84 59 4.5 5.2 1 23 1606 1629 1606 1629 0.96
41 43 0.012 0.85 10.3 1.1 3 23 1641 1662 1639 1662 0.92
42 43 0.027 1.9 9.2 3.9 1 23 1674 1696 1674 1696 0.97
43 43 4.6 3.2e+02 2.2 0.4 7 23 1708 1725 1708 1725 0.92

Sequence Information

Coding Sequence
ATGATACGAATTTCTGTTTTCAGTCTCACGGAAAATGAAATACCGAGGAAAGATCAAGAGGTAGTAGCTGATAAGGAGACTGATGGGGACACATTGGTTTGCTATCACTGCGAATACGCCGCTAGAAGTAAACGACATTTGATTCATCACATGAAAGTGCACAGGAACaggaaatatatttacagctgtTGTTTTTGCGATTTCCGAACAAATTCAGGAATATTGTTTACCACCCACAATAAGACACATTCTTTAGAGAGTAAGCAGTTCGAAGCGTTACATGTAAAAGAGGAAAATATGGATGACAATTTTAGTCAAGGGAATGccatgttgattgactcagaaacTAGTGTAGTAAATAAAAGGTCCAGTAGAGCCAGAGAATCAGTTAGTAGCAAAGTTCACCAGTGTACAAAGTGCAATTATAAAACTACCAAAACCGAATATTTGAAGCGACATTTGGTAACACATTCTGATAATCGTATAATCAGTAGATGCTTATACTGTAATAAACCATTTACACGTAAACTAACACTAGATGACCATATAGTAAGAAgtcatcctgattttatagcatcggttaGCAGCAAAGTCTACGAGTGTACgaagtgcacttataaaactgtCATTTCTCATGATTTGAAACTACATATGGTAACGCATTCTCATATAGCCGATAATAATCGTATAGCCAGGAGATGCATCTACTGTGATAAGACATTTAAATCTAAACAAGGACTGAATTATCACATAATAAAaagacatcctgattttatagcatcggttaGCAGGACTGTCCACGAGTGTACgaagtgcacttataaaactgtTTACACCAGTGATTTGAAGCAACATATGGTAAAACATTCTGATATAGCCGATAAGAATCGTATAATCAGTAGATGCTTATACTGTAATAAACCATTTACACGTAAACTAACACTAGATGACCATATAGTAAGAAgtcatcctgattttatagcatccGTCAGTGGGAAAGTCCACGAGTGTACgaagtgcacttataaaactgtCATTTCTCATGATTTGAAACTACATATGGTAACGCATTCTCATATAGCCGATAATAATCGTATAGCCAGGAGATGCATCTACTGTGATAAGACATTTACACGTAAACAAGGACTGGATGATCACATAATAAAAATGCATCCAGATTTCACAGCATCGGTTAGCAGCAAGGTCCACGAGTGTACGAAGTGCGCTTATAAAACTACTGGCACGAAAACTGAATTGCCGAGGAAAGATCAAGAAGTAGTAGCTGATAAGGAGACTGATGGGGACACATTTGTTTGCTATCACTGCGAGTACGCCATTAGAAGTAAACGTCATTTGATTGATCACATGAAAGTGCATAGGAACaggaaatatatttacagctgtTGTTATTGCGATTTTCGAACAAATTTAGGAAGATTGTTTACTACTCACAATAAGACACATTCATCAGAGAGTAAGCAATTCGAAGCGTTACATATAGAAGAGGAAAATATGGATGACAATTTTAATCAAGGGAATGccatgttgattgactcagaaacTAGTGTAGTGAATAAAAGGTCCAGTAGAGCCAGAGAATCAGTTAGTAGCAAAGTTCACCAGTGTACAAAGTGCAATTATAAAACTACCAAAACCGAATATTTGAAGCGACATTTGGTAACACATTCTGATAATCGTATAGCTATTAGATGCACCTACTGTACTAAGACATTTAAACGTAAACAAGGACTGGATGATCACATAATAAAAACgcatcctgattttatagcatcgatTAGCAGCAAGATTCACCAATGTACtcagtgcacttataaaactacaATATCTACACATATCAGGCAACATTTAATTACGAATCATCCCGAAGTAGCTGGTAATCGCATTCTTAGtagatgtatctactgtaaTAAGACATTTAAAGGTAAAGTAGGACTGGATGATCACATAGTGAAaaaacatcctgattttatagcatcggttagcagcaagattcacgaatgtactcagtgcacttataaaactacaATGTCTACACTTATCAGGCAACATTTAATTACGTATCATCCCGAGGTAGCTGGTAATCGCATTCTTAGTAGATGCATCTACTGTGATAAGACATTTGTACATAAACAGACATTAGATGATCATATAGTAAGAAAACATCccgattttatagcatcggttaGCAGGAAGATTCACCAATGTACTCAttgcacttataaaactacgaTATCTTTGTATATCAGACGACATTTAATTACGAATCATCCCGAGGTAGCTGGTAATCGCATTCTTAGtagatgtatctactgtaaTAAGACATTTAAAGGTAGTAGAGCAGCTGTTAGGATGATACTGATTTCTTTTTTCAGTGGCACGAAAAATGAATTGTCGAGGAAAGATCAAGAAGTAGTAGCTGATAAGGAGACTGATGGGGACACATTTGTTTGCTATCACTGCGAGTACGCCGTTAGAAGTAAGCGTCATTTGATTGATCACATGAAAGTGCATAGGAACaggaaatatatttacagctgtTGTTATTGCGATTTTCGAACAAATTCAGGAAGATTGTTTACTACTCACAATCAGACACATTCATCAGAGAGTAAGCAATTCAAAGCGTTACATCTAAAAGAGGAAAATATGGATGACAATTTTAGTCAAGGGAAtatcatgttgattgactcagaaacTAGTGTCGTGAATAAAAGGTCCAGTAGAGCCAGAAAGAGACAACCTCATTTCAGAGAATCAGTTAGTAGCAAAGTTCACCAGTGTACAAAGTGCAATTATAAAACTATCAGTACCAAGCGTTTGAAGCGACATTTGGTAACACATTCTGATAATCGTATAGCCAGGAGATGCATCTACTGTACTAAGACATTTAAATGTAAACAAGAACTGGATGATCACATAATAAAAACgcatcctgattttatagcatcgatTAGCAGCAAGATTCACCAATGTACtcagtgcacttataaaactacgaAATCTTTGTATATCAGACGACATTTAATTACGAATCATCCCGAGGTAGCTGGTAATCTTCTTAGtagatgtatctactgtaataagacgtttaaatttaaaataacacTAGATGACCACATAATAAAAACgcatcctgattttatagcatcgatTAGCAGCAAGATTCACCAATGTACtcagtgcacttataaaactacgaGATCTTTGTATATCAGACGACATTTAATTACGAATCATCCCGAGGTAGCTGGTAACCTTCTTAGtagatgtatctactgtaataagacgtttaaatttaaaataacacTAGACGACCACATAATAAAAGCgcatcctgattttatagcatcgatTAGCAGCAAGATTCACCAATGTACtcagtgcacttataaaactacgaTATCTTTGTATATCAGACAACATTTAATTACGAATCATCCCGAAATAGCTGGTAATTGCATTCTtagatgtatctactgtaaTTGTAATAAGACATTTAAACGTAAACAAGGACTGGATGATCACATAATAAAgacacatcctgattttattgcatcggttagcagcaagattcacgaatgtactcagtgcacttataaaactacgaGATCTTTGTATATCAGACGACATTTAATTACGAATCATCCCGAAATAACTGGTAATCGTATTCTTAGTAGCTGCCTTCACTGTAATAAGGCGTTTAAATGTAAACGAGGACTGGATTATCACATAATAAAaagacatcctgattttatagcatcggttaGCAGCAAGATTCACGAATGTACTCAGTGCACATATAAAACTACGGATGTTAAGTGTCTCAGGGAACATTTAATGATAAAACATCACGAGATAGCTGGTGATCGCATTCTTAGTAGATGTATCTACTGTGATAAGACATTTAAAAGTAAACCAGGACTGAATGAacacataatcaaaatacatcctgattttatagcatcggttagcagcaaaattcacgaatgtactcagtgcacttataaaactaccAGTGCCAATTTTATCAAGGACCATTTAAGGATAAAACATCACGAGATAGCTGGTAACCGTATGTTTAGCTGTATCTACTGTGATAAAATATTTACTCGTAAACTGGCACTGGATGATCACATAGTAAAGgcacatcctgattttatagcatcggttaCCAGAAAGATCCACGAATGTACtcagtgcacttataaaactacaGTTTCTGCAAATTTCAGGCAACATTTAATTGCGAAACATCCCGATGTAGCTGTAGTTAATGTAGTTCGTAGCTGTATTCATTGTAACAAACCATTTATACGTAAACAAGGACTGGATGATCACATAATAAAgacacatcctgattttatagcatcggttaGCAGCACGATTCATGAATGTACtcagtgcacttataaaactacgattgccaaatgTCTCAAGAACCATTTATTGATCAAACATCCCGAGATAGCTGGTGATCGCATTTTTAGtagatgtatctactgtaaTAAGACGTTTAAAAGTAAACCAACACTAGATGATCACATAATAAACACgcatcctgattttatagcatcgatTAGCAGCAAGATTCATGAATGTACtcagtgcacttataaaactacgaTGGCCAAATGTCTCAAGAACCATTTATTGATCAAACATCCCGAGATAGCTGGTGATCGCATTCTTAGtagatgtatctactgtaaTAAGACGTTTAAATGTAAAACAACACTGAATGAgcacataataaaaatacatcctGATTCTATAGCATCGGTTAGCAGCAAGATTCATGAATGTACtcagtgcacttataaaactacgaTGGCCAAATGTCTCAAGAACCATTTATTGATCAAACATCCCGAGATAGCTGGTGATCGCATTTTTAGTAGATGTATCTACTGTACTAAGACATTTACACGTAAAATAACACTAGATGACCACATAATCAAgacacatcctgattttatagcatcggttaGCAGAAAGGTTCACGAGTGTACGAAGTGCACTTATAAGACTGTTTTCACCACTGATTTGAAGCGACATATGGTAACACATTCTCATATACCTGATAATAATAGTATAGCCAGTGATAAGACATTTGCACATAAACAATCACTAGATGATCACATAGTTAGAAGACATACTGATGATGATCACATGCTAAGAGAACATCCAAATTCTATAATATCTGGTAGCAAAATAAGAGAAGGGACAAAGTGCACCGATAGTTCAAACAATCATATGTTGAAACATTCTGAGTCGGTTTATGATTCTTACATATGA
Protein Sequence
MIRISVFSLTENEIPRKDQEVVADKETDGDTLVCYHCEYAARSKRHLIHHMKVHRNRKYIYSCCFCDFRTNSGILFTTHNKTHSLESKQFEALHVKEENMDDNFSQGNAMLIDSETSVVNKRSSRARESVSSKVHQCTKCNYKTTKTEYLKRHLVTHSDNRIISRCLYCNKPFTRKLTLDDHIVRSHPDFIASVSSKVYECTKCTYKTVISHDLKLHMVTHSHIADNNRIARRCIYCDKTFKSKQGLNYHIIKRHPDFIASVSRTVHECTKCTYKTVYTSDLKQHMVKHSDIADKNRIISRCLYCNKPFTRKLTLDDHIVRSHPDFIASVSGKVHECTKCTYKTVISHDLKLHMVTHSHIADNNRIARRCIYCDKTFTRKQGLDDHIIKMHPDFTASVSSKVHECTKCAYKTTGTKTELPRKDQEVVADKETDGDTFVCYHCEYAIRSKRHLIDHMKVHRNRKYIYSCCYCDFRTNLGRLFTTHNKTHSSESKQFEALHIEEENMDDNFNQGNAMLIDSETSVVNKRSSRARESVSSKVHQCTKCNYKTTKTEYLKRHLVTHSDNRIAIRCTYCTKTFKRKQGLDDHIIKTHPDFIASISSKIHQCTQCTYKTTISTHIRQHLITNHPEVAGNRILSRCIYCNKTFKGKVGLDDHIVKKHPDFIASVSSKIHECTQCTYKTTMSTLIRQHLITYHPEVAGNRILSRCIYCDKTFVHKQTLDDHIVRKHPDFIASVSRKIHQCTHCTYKTTISLYIRRHLITNHPEVAGNRILSRCIYCNKTFKGSRAAVRMILISFFSGTKNELSRKDQEVVADKETDGDTFVCYHCEYAVRSKRHLIDHMKVHRNRKYIYSCCYCDFRTNSGRLFTTHNQTHSSESKQFKALHLKEENMDDNFSQGNIMLIDSETSVVNKRSSRARKRQPHFRESVSSKVHQCTKCNYKTISTKRLKRHLVTHSDNRIARRCIYCTKTFKCKQELDDHIIKTHPDFIASISSKIHQCTQCTYKTTKSLYIRRHLITNHPEVAGNLLSRCIYCNKTFKFKITLDDHIIKTHPDFIASISSKIHQCTQCTYKTTRSLYIRRHLITNHPEVAGNLLSRCIYCNKTFKFKITLDDHIIKAHPDFIASISSKIHQCTQCTYKTTISLYIRQHLITNHPEIAGNCILRCIYCNCNKTFKRKQGLDDHIIKTHPDFIASVSSKIHECTQCTYKTTRSLYIRRHLITNHPEITGNRILSSCLHCNKAFKCKRGLDYHIIKRHPDFIASVSSKIHECTQCTYKTTDVKCLREHLMIKHHEIAGDRILSRCIYCDKTFKSKPGLNEHIIKIHPDFIASVSSKIHECTQCTYKTTSANFIKDHLRIKHHEIAGNRMFSCIYCDKIFTRKLALDDHIVKAHPDFIASVTRKIHECTQCTYKTTVSANFRQHLIAKHPDVAVVNVVRSCIHCNKPFIRKQGLDDHIIKTHPDFIASVSSTIHECTQCTYKTTIAKCLKNHLLIKHPEIAGDRIFSRCIYCNKTFKSKPTLDDHIINTHPDFIASISSKIHECTQCTYKTTMAKCLKNHLLIKHPEIAGDRILSRCIYCNKTFKCKTTLNEHIIKIHPDSIASVSSKIHECTQCTYKTTMAKCLKNHLLIKHPEIAGDRIFSRCIYCTKTFTRKITLDDHIIKTHPDFIASVSRKVHECTKCTYKTVFTTDLKRHMVTHSHIPDNNSIASDKTFAHKQSLDDHIVRRHTDDDHMLREHPNSIISGSKIREGTKCTDSSNNHMLKHSESVYDSYI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-