Cmac020079.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Callosobruchus maculatus
Gene Symbol
-
Assembly
GCA_900659725.1
Location
CAACVG010014457.1:136383-163133[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.0014 0.096 13.3 2.8 1 23 2390 2412 2390 2412 0.98
2 7 0.00011 0.008 16.7 0.0 1 23 2419 2441 2419 2441 0.99
3 7 0.025 1.8 9.3 0.2 1 23 2447 2469 2447 2469 0.97
4 7 0.00014 0.0097 16.4 0.4 1 23 2481 2503 2481 2503 0.98
5 7 0.00011 0.008 16.7 2.7 1 23 2509 2531 2509 2531 0.98
6 7 0.00011 0.0074 16.8 0.4 1 23 2537 2559 2537 2559 0.98
7 7 6.5e-05 0.0046 17.5 5.2 2 23 2566 2588 2565 2588 0.97

Sequence Information

Coding Sequence
ATGAAGAAAAAGCCACAGCTGCCAAGGAAATTAGGTAAACCGAATGCCTTGCGTAAAAGTGTGCTGAGTAATCGTCGTGATATCGAGAACAATAATGAAAACAAACAGTTATCACAGTGTGTATTTCTTGGTGTTTTGAGACTGAAACCTGTGCCTACGACCTTCTCAAGGACCACCGTACCTTCAGGTAGTACATCTTTTATTTCTCATAGGCTTAGGAGACATAGGAATAATAGTATTGCCAAAGAAAGCAGTAAGAAGCCCACTAAAGGAATTGATTTAAATAAGGTCATCAGTggaaaaataacaaagaaaaatccTGATAAAGTTAGGGCTTGTGTCAAGAAAAATCCATTAGGTACTTCTAAGGTACTTAGAATATGCTTAACAATGAACCGAGCAATGATGAATCTACAAAGTAACAATTCTGAAGTTGTTAATGTAACTGATATACCTTTTCCATCAACAAGTTTTGTAGTAACTCAGCCCTCTTTTAACCCTGTAGATAATTTGTTCAATAAGCTTAAGCAAcaattgaagcatgcagaatcccCAGGCTCTCTAGATGTATCACTGTTGTCATCAACAGTAGCTAAAATGAATGCTTCGAAACAGCTAACAACTCATGCTGTTAAAGCTAAAAGGAAGCAGTCTGATAATTTAACAGTTTCAAATGACAGTAATTCTGATGATATTATTTGGATTAGTGATTCAGGTGCTATAGAACATAACACTCAAACTTCAAATgatgatatcatttttatagATGATTCTAGGGCAGTTGATGCTTCCTCCAGTCATGTTAAAAGTCTATCTTTGAAAGGCACTTCTACAAGTACAACAGTACTTACAGATGCTGAGAAACCTCAAAATTCCCATATAAGGCAAAATAGTATTGACAATCAAGTTGTAATAAGTACAGAATCCACAAAATCAAAGCAAGCCACCTCCTCTGACCAAACACAGAAAATATATGATGTAGACGATCACGATTCTTCAAGTGAAGGTGTATCACATAATAAATCTATTGACAAACAGAAAGAGAAAGCCAAGTCTAGAAGAAACCGTTTGATTCCAGCAGAAATACcattaaaatatgttaatgCACCAAGGCTTTTAAGATCAGAACTTTATCAGAAAGCTGATCAGAAGAGATCTACTAGCTTAGAGGGTAAGGATCGAAcaaaagaaaaatcaaaatcattAAAATCTGAGAAAGTGACATTTACTATAATCAAGTCTAGCAGTGATCACAATTTAAGTCAGAAATCAAGACCAGAACTTACTGTGAGGAAGCAAAAGTCACAAGATACATCACCTGCTGAAACCAGTACATCAGTGAAGGAAAGAAAGAAGTCTTCATCCCCAAAGAACAAAACTAGTGATCGATGGGAGATTACGAGCTCAACACAATTGAGTGATCAGGCTGTCAATATTTCTGGTAGCAGCCAGAAAATTGCAGGGCAAGTAGAACAACCAGTTAGTTTCAAATTAAAACTAACAAAAACCACAAGAAGTGCTGTTGCAGCTGCCAAAGCTACACAGTCTAAAGGAATGGTTACTGATGAGGTTATTTATGTTGACAATACAAAAAAAGATACATCCTTGGATACATCATTGGAAAGACCACCTGTTGATAATGGTGAGAGTTTACACAATGCCATCAACAGTGAATCTAATACTGTGACAAATCGTCTTTTCACTCCCAGACTCCTAAGATCAGATCTTACCATCCAAAAGCCTACAACTAAAATCAGCAAGAATACTAACTTTACTATAAATCCAACTAAAGCAATAACAAGGAATGTGACAATAAAAGACTTGAATACCTCTGTTCCAACACAAACTGCTGCTAATATCTCTGATAATGAGGATGTACTAATTATAATAGATGATGCAGATGATACAAATATAAACTTGCAAGCTCCAGCAAgaagtttagaaaaaaattctcaagagAAAGTAGCAGTTATACACCCCATTCCAGTTGCTGAACATGCTGGCAATGAAGGAGTTCCTAGAGTTCTAAGATCTGATATAAGTCAGCTAATACAATGTCCAGTACCAAATAAGCCTGAAAATGCAACTTTAcactcaacaaaaataattgagGAATTGTCAAATACAGAAAAAACTAGAAATCTAAGGTCAGAAGCTTCAGTAAGATCATCAAACAAAGAACTGAAGGATAATCAAAAAGAATCAGCAGCTCAAAATCAAGTTATTTCTGCTGAAGAAGAGCCTTCTTCAAAAGGGACCATTTTTCCAAGGGTGCTAAGATCTGATGTATCTCAGAATACATTGAGCATTACAACAGTAGAAGAACAAAACCATCTTGTTGCCTCAAAATCAGTCACAGGTGTTGataaatttactgaaaaagaaAGTATTTCACCGACAAATGTGCATAGGTCAAGTACTACTGAAACTGAACACCAACCAGAACAGAGTGAAGAAAAACATAATACTGTGGTACCTGGTAGAGTACTCAGATCAGAGGCATATAAGACCATAACAAATGAAGGATTACAAGAAAAACATGATCAAGTAAGGGAACAGCCTAAAGCAATTGCACACCCAACTAATGCAAATGAGGAAAAGAGGGTTGTTAGATCAGATGTGGCTAAAGTAACAGAAATTTGTCAAGTTCAACTCAATCTGCAATCtgcagaaaatcaaaatttatctGGAAAAAGTCTGCGAACATTGAGGTCAGTGTCACCCCAAAAATCTGCATCACCACCAAAGTCAAATGAAATGCAAAAAGTAGATGAGAAGGATCGATCTGTTGATGTGAAGAGATTTTATTCAGCACAGTCATCAAAAATTTCTTCACTGAGTAACAAGTCAAGTGAGCCTGCTGCAGTTCCATCTAAGAGTTTACAATCAAGTAGTGCACAGATACAACAGGATGTTGCTCCAAAGAGCAAGGAAAATTTGCTAATAACTACTGGAAAAGAGCAACTGACATATCCAGCAACATCAAGCATCACACAAGAAGGCTCTGCTCCAAAACTGCCTGTAGAAAACCCACCTTCTAGAATGCTCAGATCAGATCCAAAGAACATACCAGATAATGTATCATCCCAGAAAAAATCAAAGAAACATGAACAACAAAAGAAACTTGAATTGGCTCAAGAAGCAAGTCATCAATCATCTGCATTAACAATCTGTAAGGATAAAATGGATCATGCATCAAGAAGAGCTGCAGCTGATGAGAACAGTAATAATAATCCAGATATATTACTTACGACAAGTAAGGAATCTACAGGAAGTGGAACCAAGGTAGCTCGTTCAAGGTCAAGTTCTCCTAATAAAGCTAAAAATGTGAACTTTGATGAAATTATTGTGTTGAGTGATAAAAAATCGCGGAAGACCAAGGATGCTTCTATGAAAATAATTACTAAGACTGACCAAAGGCTTCCTGTAAAACAAACAAACCGAGAAACAAACATTGTGGAACCTGCGGAGGAAGTAGTGGTAATTATACATGAGGAACCAAAGTCTAAAAGTGCCCCCTTGCTAGAGGTGAACCGAGAGGTGAACAATGCTAATCAAGAAGATGGAAATACTGAACTTTTGCGGCATAATTTGAGATCACAGAAGTATGTACCTGCAGATGTGCCCAAACAACCTGATGTAGACAGCATCATGAACACAGTTTCTGTAACTGAAAATTCTACAAAATTAAATGATGCAAATTCACGTCTTCTACGAAGTCAACAGGCTTCATCAAGTCAAAGCAACCCAGAAAAAGAAATTTCTACCAAAGGTATCTGTGCAGGAGGAAAAATTGAAACTGTAAAAACTACTGAAGTTGAAGTTATAACACAAGTGACCCCTAGTCACTCAAATTATGATACTAGTGAACTACAAAGAGTTGCAACTGCTAGAGTTCTTCGTTCCGAAGCAAAAAATAGTGATAGTGATAATGTTTCACAAGACAGTAAAGCAGAGAGTCCTGCTTCAAGCGATGCCAAAAAAGTTTCTTTCAAAAATACTCCAGAAGTTTTTGTTAGTACTGATACTACAAAGAAGGCTACAAAGGGcaacttaaaaaagaaaataaatgatATAATTAAAGAAACATCCATGGGAAGAAGTATACTTAAGAAAGGAAAACTAGGAGCTAAAGGCAAGATAATTAAAACAATGTCTAAAGCCTTTGGAAAAAAACAGACATTGAAAGTGAAAGTCAGAGCTCCTAATGCCtcaaaaaatactgaaaatatcaTAAAACCAGTAGAGAATATAGTAAAAGAAACAGTATGTTATAATTTGGAGACTACAAATACTTCTGAAAATTCAGAATCGGTGATAAAAGACAAGATCAAGAAGATAAAAGCTGGAAAGAAAATCGTTTTTGCAACTAAAACAAAGGAACATACAAAAAGGGATAAAAAGCAACAAAAAACCCAgaaaattgatttaaaaaaaggaaaagcacTTGTAAAAGGGAAAAATAGCTTACCTCTTGCATTGAGACGACTGCTCACAGATGGCAGAATTTCAAGAAAAACCATTGCAACTCTTGGAACAAAGGTATCAAATACTGATGATAGTGAATCAAATAAAGAAAATGTAATTTCAAAGGTAGAAAATGTTGTTGAGAAAAACATTGGGCCCAaagtaaaaaaagaacaaacaaagCAAAAGTTGCTTGCAAGGATGAAGCAGACTATTTCCAAGAGTACAAATAAGGAGTTAAAGATGgggaaaaaagacaaaaaagggGATGGAAAACCTAGGGTGAGGAACTCGAATGGAACACCACCAAAAAGGAatgttcagaaaaaaatgataacAACGCCACCCAGAAAAAAGAACCTGGAAAAAGTAGCATTTTTCAAGAAAAGTAAACCTGGTAAGGGTGGGAAATCTAAGgttgacaaaaaagaaaaaaagggtaAGACAAATGTAACCAAAGCAGTTAAATCAGTTGTTAAACTAGATAAGGCAAATAAAATCCCTGTTTCTAATGTGGAAAATAATTCAACTGGTGTTCTAGATaatagaagaacatcaagaatGTCTACTGCTACTACTGAATCACAAACTAATGTTCCTCAAAAGACAAAATCTAAAAAAGACAAACCAAAACAATCTAAGAAATCGCTTGCACAAGATCAGATGAATGGCAAAGATTATACTTCAAAGCCAGGTGATAGCAGTAACATTAAAACAGATTCTCTTgataaaaagaataaaagtaagaaaaacaaaaagggtAGTCCTGAAGCAATAGATCAAGATAAAGTCAGTAAGAAATCAATGAAGATCTCTCAAAAGAGGAAAAGAAAAGAGGAAGTTTCCTCAGTGAAGAAGATAAAATTATCGAATGAATCCTGTGAACATAATTCGGCTTACGCAAATGCAGCAAATGAGAATAAATCAACTTCCCACAAGAATATTTCAAGTGTTAAAGCGTCAGccagtacttcaaataaaaaaggaaaGATCAAAAAGAACAAGGTGGATGTTCAAGTTCAAACAGTTCCTGCTGTTGACAATTTAAAATTAGCTATTAACTCTCACTCaaaggaaaaaaagaaaaagagtaTGCCAAACAAAAGTGGAGACAAAATCAGTGATGGATCTTCAAATGTAGTTTCTCCTAGACCAAGGGTATCTCTACGGAAGAATAGAATAGTTCAACAGACTGAGGATGCAAATCAAGAAATTCAGAACTCCACTTCTGGAACAGAAACAACCAAAAAGGAGAAGGAGATTCCAATTGAAATCAAAGATGCAGATACAAACATTGGCCAAAAAAGAGAACGAAAATCTATACCAGAGGCTGAAAAAGCGGTGGGTCCAACGAAGAGTAGAGGCGGAAAAAGTCTGGTAATTAACAAGAGGCTATCGAAAAGAGCATGTGTGATACAGCAAGGGGAGCAGGAAGCAAGCAAAAAGGAATGTGATGTTAAGAAGCCTCTCATTGTAGCAAGTTGTGACAGTGCAGTGAATACAACAATCACTCTACCTCCGGGAACATCAATAGAGCCCATTGTAATCGAAGACGTCAAGGAAGAGGATCCAAACAAATCAAATacattaattaataataatataccagcAAAATCAAGCCTGTCAGTGTTTGACTTCAATGAATCTGACATGGAACTAAACACCCCACCTTTATTAACATTGCAAAATATTCGTgaggaaataaaagaaaaatatacatatcaaaaaGAACATGGTCAAGATGTTACTTATGTTGTACATGATGATCGCTCTGGCCGGAACACAGAAATAAACAATGTCACCTATACATTGTCATCTAGTAACCCAACTCAAGACCATAATAAAACATACACTACTCTGAATCCTGTACCAAATGCATCTAGCAAGGATGCTTTGAGTGCTCTTAACACAAGCATTTCAGTTAAGGAGCCTGAAAGTAATACATTCTCCCCTCCCCAGAAGTCAACCCCAAAAATGACAAAATCTACGAGCCAAGTTAAAGGTCCAAAGTTGTATTCTGTTATACCTGCAGAAGAGATAGTAAGAAAGCGCATTGAACAGGCGGCTCATCTTAAAGTTCAACAATCCCAGAGTATTGACTTGACATCTGTGTCAGAGCAGCAGGTAATAGTACAAGAGAGGCAGATTCAAGTGAGACGACCCTCACAAATATGTGACCTGTCAAAAAATAAGCATAACTTGCTGACTAGTGCTGGTGGCGTTGAAATCTCAGGTAACCCTATCCAAGTGAAAGCTGATAAAGTGAGCCCTGCAACATCCAACTCTTCAACTTTTGAAGACTTGTTCAAGTCCCCTATAAAATCTCCAAAGAAATCACCTTTGAAACAGACTACAATCCTGGACATGTTTGCAAAGATGCAACAGAAGAACATTATAAAGTCTATCTTCTCCCAACCAGAGACTTCTCAACAGGGATCAAAGATGGAGCCTCAAATGCAGCAGCAGCAACAACCTACATTCACCACACTGAGTCGACTCCCCAAAGATACCAGTATAACGCCAGAGGTAGCTGCCCCAATGAAAGAAAGTGACAGTTCAGATATGCCGCCTCCAAAGTTGTCGGCTTATGGTGAGGATGAAGATAGTGATGGAGAAAGTAGAATGGAATGGGTACCTGAAGAGTATGCCGAGTACAAGTTTAAGTATACAGCAAAGAAGGTGATGAGCTACAAACCAATCTACAAGTGCAAGGTCTGTCTGCAAATGTTCCCCACTTACTACAAATTGAACAAGCATAAGCGAGAACACTCTGAAACTGATAATCCCTACAAATGTCCACAGTGTGAGTCGTCCTTCAATAGCGTCGCAGATTTAGCGGCTCACATTCGTGTGCATAAGGGAAAACACCCATATACGTGTAAAAAGTGTGATACTGGATTTTGGACCAAAGAAGAACTTGATGAGCATGTATCTATACATCTCCTCAAGAAAATTAAACCACCAGAGAAAAAATTCCGCTGTGATGTATGTCTTAAGGAGTTTAGCAGACTGTTTGAAGTCGAGAGGCACATTCGAGTTCATACAGGCGAGAAACCGTTCACGTGCAACATTTGCAACAAGGGGTACCAGCAGCGACACAACCTGAGCAAGCATCTGTTGATCCACCTGGACGTGCGGCCGTTCCACTGCGAGATCTGCGGCAAGGCGTTCGGCAGGAGCGATGTGCTGGACAGACACGTGCTGACCCACTCTGTAGCGAAGCCGGTCAAATGCCCGCACTGTGACAAGGATTTCATCAGGCATATGCAGCTGAAGAACCACATGAAGAAACGTCACAAAGAGTTCTACGATGAAAACTCTGTTTATGGAGTTGCAGCACCAAAAGACGAGTCGTCTGGTGATCCTGCTAGTACTCCACCCAAAGAAGAGACTGTGCAGCCTCAGGGTACTGAAACAAAGTCTGTAGAGCCTAAACCTACTGAACCTCTTGCTACAGCGTGA
Protein Sequence
MKKKPQLPRKLGKPNALRKSVLSNRRDIENNNENKQLSQCVFLGVLRLKPVPTTFSRTTVPSGSTSFISHRLRRHRNNSIAKESSKKPTKGIDLNKVISGKITKKNPDKVRACVKKNPLGTSKVLRICLTMNRAMMNLQSNNSEVVNVTDIPFPSTSFVVTQPSFNPVDNLFNKLKQQLKHAESPGSLDVSLLSSTVAKMNASKQLTTHAVKAKRKQSDNLTVSNDSNSDDIIWISDSGAIEHNTQTSNDDIIFIDDSRAVDASSSHVKSLSLKGTSTSTTVLTDAEKPQNSHIRQNSIDNQVVISTESTKSKQATSSDQTQKIYDVDDHDSSSEGVSHNKSIDKQKEKAKSRRNRLIPAEIPLKYVNAPRLLRSELYQKADQKRSTSLEGKDRTKEKSKSLKSEKVTFTIIKSSSDHNLSQKSRPELTVRKQKSQDTSPAETSTSVKERKKSSSPKNKTSDRWEITSSTQLSDQAVNISGSSQKIAGQVEQPVSFKLKLTKTTRSAVAAAKATQSKGMVTDEVIYVDNTKKDTSLDTSLERPPVDNGESLHNAINSESNTVTNRLFTPRLLRSDLTIQKPTTKISKNTNFTINPTKAITRNVTIKDLNTSVPTQTAANISDNEDVLIIIDDADDTNINLQAPARSLEKNSQEKVAVIHPIPVAEHAGNEGVPRVLRSDISQLIQCPVPNKPENATLHSTKIIEELSNTEKTRNLRSEASVRSSNKELKDNQKESAAQNQVISAEEEPSSKGTIFPRVLRSDVSQNTLSITTVEEQNHLVASKSVTGVDKFTEKESISPTNVHRSSTTETEHQPEQSEEKHNTVVPGRVLRSEAYKTITNEGLQEKHDQVREQPKAIAHPTNANEEKRVVRSDVAKVTEICQVQLNLQSAENQNLSGKSLRTLRSVSPQKSASPPKSNEMQKVDEKDRSVDVKRFYSAQSSKISSLSNKSSEPAAVPSKSLQSSSAQIQQDVAPKSKENLLITTGKEQLTYPATSSITQEGSAPKLPVENPPSRMLRSDPKNIPDNVSSQKKSKKHEQQKKLELAQEASHQSSALTICKDKMDHASRRAAADENSNNNPDILLTTSKESTGSGTKVARSRSSSPNKAKNVNFDEIIVLSDKKSRKTKDASMKIITKTDQRLPVKQTNRETNIVEPAEEVVVIIHEEPKSKSAPLLEVNREVNNANQEDGNTELLRHNLRSQKYVPADVPKQPDVDSIMNTVSVTENSTKLNDANSRLLRSQQASSSQSNPEKEISTKGICAGGKIETVKTTEVEVITQVTPSHSNYDTSELQRVATARVLRSEAKNSDSDNVSQDSKAESPASSDAKKVSFKNTPEVFVSTDTTKKATKGNLKKKINDIIKETSMGRSILKKGKLGAKGKIIKTMSKAFGKKQTLKVKVRAPNASKNTENIIKPVENIVKETVCYNLETTNTSENSESVIKDKIKKIKAGKKIVFATKTKEHTKRDKKQQKTQKIDLKKGKALVKGKNSLPLALRRLLTDGRISRKTIATLGTKVSNTDDSESNKENVISKVENVVEKNIGPKVKKEQTKQKLLARMKQTISKSTNKELKMGKKDKKGDGKPRVRNSNGTPPKRNVQKKMITTPPRKKNLEKVAFFKKSKPGKGGKSKVDKKEKKGKTNVTKAVKSVVKLDKANKIPVSNVENNSTGVLDNRRTSRMSTATTESQTNVPQKTKSKKDKPKQSKKSLAQDQMNGKDYTSKPGDSSNIKTDSLDKKNKSKKNKKGSPEAIDQDKVSKKSMKISQKRKRKEEVSSVKKIKLSNESCEHNSAYANAANENKSTSHKNISSVKASASTSNKKGKIKKNKVDVQVQTVPAVDNLKLAINSHSKEKKKKSMPNKSGDKISDGSSNVVSPRPRVSLRKNRIVQQTEDANQEIQNSTSGTETTKKEKEIPIEIKDADTNIGQKRERKSIPEAEKAVGPTKSRGGKSLVINKRLSKRACVIQQGEQEASKKECDVKKPLIVASCDSAVNTTITLPPGTSIEPIVIEDVKEEDPNKSNTLINNNIPAKSSLSVFDFNESDMELNTPPLLTLQNIREEIKEKYTYQKEHGQDVTYVVHDDRSGRNTEINNVTYTLSSSNPTQDHNKTYTTLNPVPNASSKDALSALNTSISVKEPESNTFSPPQKSTPKMTKSTSQVKGPKLYSVIPAEEIVRKRIEQAAHLKVQQSQSIDLTSVSEQQVIVQERQIQVRRPSQICDLSKNKHNLLTSAGGVEISGNPIQVKADKVSPATSNSSTFEDLFKSPIKSPKKSPLKQTTILDMFAKMQQKNIIKSIFSQPETSQQGSKMEPQMQQQQQPTFTTLSRLPKDTSITPEVAAPMKESDSSDMPPPKLSAYGEDEDSDGESRMEWVPEEYAEYKFKYTAKKVMSYKPIYKCKVCLQMFPTYYKLNKHKREHSETDNPYKCPQCESSFNSVADLAAHIRVHKGKHPYTCKKCDTGFWTKEELDEHVSIHLLKKIKPPEKKFRCDVCLKEFSRLFEVERHIRVHTGEKPFTCNICNKGYQQRHNLSKHLLIHLDVRPFHCEICGKAFGRSDVLDRHVLTHSVAKPVKCPHCDKDFIRHMQLKNHMKKRHKEFYDENSVYGVAAPKDESSGDPASTPPKEETVQPQGTETKSVEPKPTEPLATA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-