Basic Information

Insect: Callosobruchus maculatus
Gene Symbol: zfh1
Assembly: GCA_900659725.1
Location: CAACVG010015744.1:154159-217919[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.65 46 4.9 0.4 2 23 46 68 45 68 0.88

2 9 0.0024 0.17 12.5 0.4 3 23 105 125 103 125 0.95

3 9 7.4e-06 0.00052 20.4 0.6 2 23 132 153 131 153 0.97

4 9 3.8e-06 0.00027 21.3 6.6 1 23 162 184 162 184 0.99

5 9 5.8e-05 0.0041 17.6 1.0 1 21 190 210 190 211 0.95

6 9 0.00031 0.022 15.3 2.3 1 23 448 471 448 471 0.93

7 9 8e-06 0.00056 20.3 1.3 1 23 790 812 790 812 0.94

8 9 0.00067 0.047 14.3 10.7 1 23 818 840 818 840 0.98

9 9 0.0022 0.15 12.6 4.3 1 21 846 866 846 867 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.65	46	4.9	0.4	2	23	46	68	45	68	0.88
2	9	0.0024	0.17	12.5	0.4	3	23	105	125	103	125	0.95
3	9	7.4e-06	0.00052	20.4	0.6	2	23	132	153	131	153	0.97
4	9	3.8e-06	0.00027	21.3	6.6	1	23	162	184	162	184	0.99
5	9	5.8e-05	0.0041	17.6	1.0	1	21	190	210	190	211	0.95
6	9	0.00031	0.022	15.3	2.3	1	23	448	471	448	471	0.93
7	9	8e-06	0.00056	20.3	1.3	1	23	790	812	790	812	0.94
8	9	0.00067	0.047	14.3	10.7	1	23	818	840	818	840	0.98
9	9	0.0022	0.15	12.6	4.3	1	21	846	866	846	867	0.96

Sequence Information

Coding Sequence: ATGACGTCAGTTACATTAGCGGTTAGCCCACAAAcagccCCGTCTCTCACGAACGGCGTCATCAAAGAAGAGGAAATGTCCCCCATGGCAGCAGTGGCGGCGGCAGCCGCAGCAGCCGCCGCCGAGTACTTCATCAAGTGCCCGCAGTGCCAACAGGGCTGCCAGTCCTTCCAAGCACTCAAGGAACATGCGGAGGCGGTGCACGGCGGAGAAGGGGCGGTCGCTCCCGCATCGGGGGCGGGGCTAAACGCTGCCGAGATGGGCGGAGCCCGAACGCCACCCTCCCTGGCTGGTCCAGGAGGCCCGTTCGGCTGCGCGCATTGCCCAACCTCTTTCGCCGCCAAAGACCAGCTcgaaaagcacgagctgttacACTCTCCCAATGCTCAAGTGTCATGCAAGATTTGCAACAAGACTTTCGCAAACGTGTATAGGCTGCAACGACACATGATCAGCCATGACGAAAGCGCCGTACTTAGGAAATTCAAATGCACACAGTGCGATAAGGCCTTCAAGTTCAAGCATCACTTAAAGGAACACATCCGAATCCACAGTGGAGAAAAGCCATTCGAGTGCGGAAACTGCGGGAAGCGTTTCTCACACTCAGGATCTTATTCTAGTCATATGACATCAAAAAAGTGTCTtgtaatgaatctcaaattagGTAGAACTAGAGCTCCAACGAACAATACTCTCTTAGATAAAACCTCACAGCAAAACGTAAGGATACCAAAGAGAACCAATGTTAGtccgataaataataatattccaaCTAGTCCTAATCACAACGCATACTTGCCTATACTTCCAAAGTATTCAGAAGCTGCAGCTGCTTTCTTCCAATCTTCATTAGCTGGCAATACTTCGCTGTCTCCTTTCTATTTGACACCTCCGTCTCTGCTCAACACTGGTCACTCCATAGACCCTTACCGTACTATACCTTCGCTGGGTCACATATTGGAGCAGTTACAGCAGCAGAACGCCAACCACTTAAGACCTCCAATCATGGATACGGATACTCCGTCTAGGTATGTTACGCCGCATGGCTATGATACAGCCAGCATCAAGTCTGAAAACAACGATAACGCTCCTTCCAATGCTGCGTCGGAGTGTGGAGACCTGATTATGGACGAAGATGCCGATCCGGAGCCCGAGATAGTAAAGACGGAAACAGAGAATAAAGAAAATACAAACAACGGAGACTTAGAAGCTGTGAAACGAATACTAGAAACCGTGAACGCAACAGTTACGAAAGAGCTACTGCAAGCAAACATGCAAAAAGTTACCTCAGACTGTTCTAGTGATAGCCATAGTGTGACGTCATCTCATTCTCCTCGAGCGTTTAGTTGTAGTAACTGTAAAAAATCCTTCGTCTCTTCCAACCAGTTGGAGGAGCATGAATGCGAGGACCATCGAAGCGAAGGCTTGGCCGCAAAGTTAGAGGATGCTTTAACCTCAAAATCCGACGATGCTCATAATGGTAGTATTAGCAGTAACGATGATCAAGACTATGATAGGTTACATTACAACGCGAACGACGAAGTCGACTCCGAATCTTTCGCCACCACTGATCATGTCTCAGAAGATGGCAGGAAAGTGAGGGTTCGGTCATTGATCTCCGACGAACAGCTGAAAGTGCTAAAGGACCATTACAAATTGAACGCCAGGCCGAAGAGGGAAGACCTGGAGAAGATCGCAGCGACGATAGGGTTTCCTGTGAGGGTGGTGCAAGTTTGGTTCCAAAATACCAGAGCAAGAGATAGACGAGAAGGTCGTCTGTTTCAAGTTCCTTATAATCCAGCGTCGTACCCTCCGACGACGAGCGTAGTTCCAATGAAGTTGTGTCCGCAAGACAGTTCACCACCACCGGAGCCCGAGTACATCTCAGAACAACCGCTGGATCTGTCGATAAGAAAGGGTTCGATGTCCAACGAATCATCGCCTGTCAGTTCACCGCGGAGATCTCCTTCAGTCAACCACCAAGAATCGAACGACGAGGTGGTGAACCTTAGCAGAAAGTCGTCCAGTCCAGGTCCTTACGTGCCGCACCATTACCAAGGCTCCAACTCGTCAGAGCCGCGACAATCACCTTCGCCATCCGGTATGGACTTCAACAGCAGCCGATTGGCGCAGATCTTAGCCCAACCGAGCCACGTGTCCATTCCGGGCATGGGGTTGGTCTCGCTGCTCGACCAGCCGAGCCTCTCCCATCTGATCAAGGTGAAGCTGTCCAGCATGAGCCCCCAGGGGGAGAAGCGGAAGTGCGACGCGATGGACGAGGACCCTAACGGGGCCAAAAGGCGGTTCATGCTCAAGAATCTCGGCGTCCCGGTGTACGACGGCCAAGAGCCGGAGGTCGAGGGCCAATTCAGCTGTGATCAATGTGATAAGGCGTTCTCGAAGCAGAGCTCGTTGGCCAGGCACAAGTACGAGCATTCAGGTCAACGACCTCACAAGTGTGACGAATGCACCAAAGCATTCAAGCACAAACACCATCTGACCGAACACAAAAGACTGCATAGTGGCGAGAAGCCCTTTCAATGCAGCAAATGCTTGAAGCGCTTCTCTCACTCTGGATCCTACAGCCAACACATGAACCATCGATACTCCTACTGCAAACCTTACAGAGAATAA
Protein Sequence: MTSVTLAVSPQTAPSLTNGVIKEEEMSPMAAVAAAAAAAAAEYFIKCPQCQQGCQSFQALKEHAEAVHGGEGAVAPASGAGLNAAEMGGARTPPSLAGPGGPFGCAHCPTSFAAKDQLEKHELLHSPNAQVSCKICNKTFANVYRLQRHMISHDESAVLRKFKCTQCDKAFKFKHHLKEHIRIHSGEKPFECGNCGKRFSHSGSYSSHMTSKKCLVMNLKLGRTRAPTNNTLLDKTSQQNVRIPKRTNVSPINNNIPTSPNHNAYLPILPKYSEAAAAFFQSSLAGNTSLSPFYLTPPSLLNTGHSIDPYRTIPSLGHILEQLQQQNANHLRPPIMDTDTPSRYVTPHGYDTASIKSENNDNAPSNAASECGDLIMDEDADPEPEIVKTETENKENTNNGDLEAVKRILETVNATVTKELLQANMQKVTSDCSSDSHSVTSSHSPRAFSCSNCKKSFVSSNQLEEHECEDHRSEGLAAKLEDALTSKSDDAHNGSISSNDDQDYDRLHYNANDEVDSESFATTDHVSEDGRKVRVRSLISDEQLKVLKDHYKLNARPKREDLEKIAATIGFPVRVVQVWFQNTRARDRREGRLFQVPYNPASYPPTTSVVPMKLCPQDSSPPPEPEYISEQPLDLSIRKGSMSNESSPVSSPRRSPSVNHQESNDEVVNLSRKSSSPGPYVPHHYQGSNSSEPRQSPSPSGMDFNSSRLAQILAQPSHVSIPGMGLVSLLDQPSLSHLIKVKLSSMSPQGEKRKCDAMDEDPNGAKRRFMLKNLGVPVYDGQEPEVEGQFSCDQCDKAFSKQSSLARHKYEHSGQRPHKCDECTKAFKHKHHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRYSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00260503;
90% Identity: iTF_00248825;
80% Identity: iTF_00260503;