Basic Information

Insect: Callosobruchus maculatus
Gene Symbol: Zfpm1
Assembly: GCA_900659725.1
Location: CAACVG010009114.1:20197-37216[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 1.4e+02 3.3 0.1 2 23 7 28 6 28 0.94

2 15 0.013 0.94 10.2 0.3 1 23 529 552 529 552 0.89

3 15 0.006 0.42 11.3 0.6 2 23 629 651 629 651 0.92

4 15 0.02 1.4 9.6 4.8 1 23 659 681 659 681 0.95

5 15 0.00071 0.05 14.2 1.4 2 23 684 705 683 705 0.97

6 15 0.14 9.7 7.0 5.1 1 23 711 733 711 733 0.81

7 15 5.5e-05 0.0039 17.7 6.0 2 23 740 761 739 762 0.95

8 15 0.34 24 5.8 1.1 5 23 775 793 774 793 0.95

9 15 0.012 0.83 10.3 3.7 3 23 800 821 799 821 0.97

10 15 0.077 5.4 7.8 0.1 2 23 837 857 836 857 0.96

11 15 0.00016 0.011 16.2 1.4 1 20 863 882 863 885 0.92

12 15 0.0003 0.021 15.4 0.2 1 23 893 915 893 915 0.99

13 15 0.002 0.14 12.8 3.2 1 23 921 943 921 943 0.97

14 15 9e-07 6.4e-05 23.3 3.5 1 23 949 971 949 971 0.98

15 15 0.0012 0.083 13.5 5.9 1 23 977 999 977 1000 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	1.4e+02	3.3	0.1	2	23	7	28	6	28	0.94
2	15	0.013	0.94	10.2	0.3	1	23	529	552	529	552	0.89
3	15	0.006	0.42	11.3	0.6	2	23	629	651	629	651	0.92
4	15	0.02	1.4	9.6	4.8	1	23	659	681	659	681	0.95
5	15	0.00071	0.05	14.2	1.4	2	23	684	705	683	705	0.97
6	15	0.14	9.7	7.0	5.1	1	23	711	733	711	733	0.81
7	15	5.5e-05	0.0039	17.7	6.0	2	23	740	761	739	762	0.95
8	15	0.34	24	5.8	1.1	5	23	775	793	774	793	0.95
9	15	0.012	0.83	10.3	3.7	3	23	800	821	799	821	0.97
10	15	0.077	5.4	7.8	0.1	2	23	837	857	836	857	0.96
11	15	0.00016	0.011	16.2	1.4	1	20	863	882	863	885	0.92
12	15	0.0003	0.021	15.4	0.2	1	23	893	915	893	915	0.99
13	15	0.002	0.14	12.8	3.2	1	23	921	943	921	943	0.97
14	15	9e-07	6.4e-05	23.3	3.5	1	23	949	971	949	971	0.98
15	15	0.0012	0.083	13.5	5.9	1	23	977	999	977	1000	0.95

Sequence Information

Coding Sequence: ATGGATCCAAACAACATTGTGTGTCCTGTATGTACCTTATTCCTTAGGCCAGGCATAACACTAAAACAGCATTTAACCTCTCATCCAAAGCAGAAGGTTATTGAAGCACTTGTAAAGTTAGCTGAAGATACTAACAAAGAACCAGAACCATCTGCCACATTAGACCCCACCAAACCCACAAATTCTGCTCAGGTGAATACTGCTATATCAAATGGAACATGGCAACCTCCACCACCACCTGCTGTACCGTCAACTTCCCAAGTACATCCAGTACATGGGAACCACCTATTTATTTATCAACAAAGCATGAGTACTACATCGCCTCAAGCAAATATGATGAATGTAAATCCAATATCTCAGCATTATGTTTATCCTACAGTTTTCAATCCTCAGATAATGCCTTATGTATATCAGCAGCAGCAAGTCATATTGTCGAGCAATTCTCTGCCTCCGCCAATGAGAGCATTGCCATTTGAACTGCCTAATTCCGCAACAAATAATTCAACTGATGTAAAGAAAGTTAGTGGGAGTGATGAAGGGAGAATTGTTGAGGTACAAGATGATAGCGGTGTCGATACAACAATGGAAACAGAATCATCTAAAGAGGAGGGAGAAGACTGTGAAAGTGCTACCAAAAAAGATTTGGCTCATGAGGAGGACGAGGATGAAGATGatgaagaggaggaagaaacaCTTCACTCAGAATATAATGAAGAAGTTACAATAAAGGAGAATCATGTAGATCAATTTTATAAGCCTGTTGATCATGAAGAATGTGTAGGGTCTCCTAAATCCCACTCAAACATAGAATGGGGACTAAATACAGAACTGAATAAAGCTTGCCAAACGCAAAACATCTGTAGTTCACCATCTAGAAGCCAGATCAGAGAGGAACAAGCACAAATTGAACCACAGAAGGATCGTCCAGATTATTTTTATATGGACCAACAAAATCAGTATTCAGTAAGGTCAGATTGCTATCAGGATCCTGTTACTAGTGTACCCTTTACTACAATAAAGCTAAACAATACATATGAACAGTCTGAACCAATATACACATCTGCAAATATCTTGCATGGAAATGATCATCTTGAGTTTGTAACTATGGATGACATTGTCATCATCAATGACTTCCCTTCAAATCACCAAGTAGTGTCACAAGTAGAAAATTTTGAGATCACATCACCTGATAGATCGGGAGTATTGATGACCATTGGAGAGGTAGTAGAACCGCCAAAGATGGATTTCAATGACCAGCGTGATTTGGAGGAAAGCATGTCTAGAGGCAGCTCACATGTAAATATTCGTTCTGATGAGAGAATGCCAGCTACAGGCGAGCTTTCAGGTCAAGAAAGTATAGGAGATGCCAGCGATATCACCTGGAATAGATTGCAGTATCATCAAGAAGGACATTCTAGAATATTTCAGTCTTATGATTTGATTGGTAAGAACTCTTGGGAAATGTCTGATAGCGAAAGTGTGGACAACCCAGAGATACCAAAGAAAATCCCTGTTGGTATTAGCGAAGAAGctaatgatgatgatgctccCACAATTGTAGGCTTTTCTGGTCCTCCACTGAATTTCAAATGCCCAATTTGTGGCGATGGATTCACAAATTCAAAGGAGAGACGAATGCATGAGATAGAAAAGCATCCAGAGAAGAAGAGAAGTACTGTGATTGGTTGTGACATTGATAAAAAGAAAGTTAAGAAACTGGTGGTAAAATGCAAGACAGATAAGGACAAAGAAAAAGAGCAGAACTTTGATAATATTTTtacaaacaaattaaaattggaaaatgcaGATGGACCAGCTCAAGATACAACAGTAATCAAAGCAGATGATTCAACCATGCCAGTTGATCCACAAAGCTTAAAAGCAGTCTGTCCAATATGTGATTGTGTATTAGACAGCAGTAAAGCCTTAAGGAAGCATAAAAATGATGTACATAAAGAGGTAACTGCTAGTAAACATAAATGTATAACATGTGGAGAATGtttcaaaaatgaatacaaatataATGAACATCTAAAAATTCATCCTTTAGAGTGCAGGTTATGTGGTAGGTTATTTtatagaaaacaaaatattcaGCTACATATGAAAAGGCATTTAGGATTAAAGCCATATAAATGTGAGATATGTCAGAAGTGCTTTGTAACTCGCCAGAAGCATGATGAACATAAGAATGTACATACTGGTGACACTCCACTCAAGTGCAATATGTGTGATGAAAAATTTAGGAGGCATTCAAATTTGGTGCAGCATAGAAACCGTCACCAtcttcaaatgaagaaaaagGTACGGGATTACATCTGCCAATGCGGTGAAATATTCCATTCCAAAAAGAAGCTGGCATGGCACAAGGAGATCCACGAGGCGAAGCCAAAAGCATGTGCCCATTGCAGTGAAAAATTTCTACACATGTCGAGTTTGACGCGTCATATGCGACGGGCCCATAACGGGAAGTTCCTACCAGAAGAAACACGCCAGAACGAAAACGTTGAATGCCCTATTTGTAAGGGCACCTTCCTCAGGTCGTCCCTTGATGTTCACATAAAGAACCACAGTGGTCAGAGGCCCTTCACTTGTTTGATATGCAATAAGGACTTTACGACGAAGTGGAACCTGAAGCTTCACAAGTGGACGCACGCCAGCCGTACCTCGAAACCGTACAAATGCGATCAGTGTAAGGGCGCGTTCATACGCGAGACAGATTACATCGCGCATATGAACTCGCACAAGAGCGTGCGACCGTACACTTGCAACTACTGCGGCGCACAGTTCATAAGGAAGTACAACTGCTTGAGGCATGTGAAGGAGCACGAGAGCAAGAAAAATTTCAACTGTCAGGTGTGCGGAAAATCGTTCCATCGGTCGTACTACTTGAAGGACCACATGAGGGTGCACAGCGGCATAAGGCCTTACGCGTGTCACATATGCGGCAAGACGTCCTCCACCAAGTCGAACCACAACAAACATGTGCAGATCCATCACGCTAGGGAGCCGGTCAGTACCGAGAATTGA
Protein Sequence: MDPNNIVCPVCTLFLRPGITLKQHLTSHPKQKVIEALVKLAEDTNKEPEPSATLDPTKPTNSAQVNTAISNGTWQPPPPPAVPSTSQVHPVHGNHLFIYQQSMSTTSPQANMMNVNPISQHYVYPTVFNPQIMPYVYQQQQVILSSNSLPPPMRALPFELPNSATNNSTDVKKVSGSDEGRIVEVQDDSGVDTTMETESSKEEGEDCESATKKDLAHEEDEDEDDEEEEETLHSEYNEEVTIKENHVDQFYKPVDHEECVGSPKSHSNIEWGLNTELNKACQTQNICSSPSRSQIREEQAQIEPQKDRPDYFYMDQQNQYSVRSDCYQDPVTSVPFTTIKLNNTYEQSEPIYTSANILHGNDHLEFVTMDDIVIINDFPSNHQVVSQVENFEITSPDRSGVLMTIGEVVEPPKMDFNDQRDLEESMSRGSSHVNIRSDERMPATGELSGQESIGDASDITWNRLQYHQEGHSRIFQSYDLIGKNSWEMSDSESVDNPEIPKKIPVGISEEANDDDAPTIVGFSGPPLNFKCPICGDGFTNSKERRMHEIEKHPEKKRSTVIGCDIDKKKVKKLVVKCKTDKDKEKEQNFDNIFTNKLKLENADGPAQDTTVIKADDSTMPVDPQSLKAVCPICDCVLDSSKALRKHKNDVHKEVTASKHKCITCGECFKNEYKYNEHLKIHPLECRLCGRLFYRKQNIQLHMKRHLGLKPYKCEICQKCFVTRQKHDEHKNVHTGDTPLKCNMCDEKFRRHSNLVQHRNRHHLQMKKKVRDYICQCGEIFHSKKKLAWHKEIHEAKPKACAHCSEKFLHMSSLTRHMRRAHNGKFLPEETRQNENVECPICKGTFLRSSLDVHIKNHSGQRPFTCLICNKDFTTKWNLKLHKWTHASRTSKPYKCDQCKGAFIRETDYIAHMNSHKSVRPYTCNYCGAQFIRKYNCLRHVKEHESKKNFNCQVCGKSFHRSYYLKDHMRVHSGIRPYACHICGKTSSTKSNHNKHVQIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00249191;
90% Identity: -
80% Identity: -