Basic Information

Insect: Callosobruchus maculatus
Gene Symbol: zfh1
Assembly: GCA_900659725.1
Location: CAACVG010006347.1:116321-118215[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.6e-06 0.00025 21.4 0.8 1 23 7 29 7 29 0.98

2 15 2.9e-06 0.00021 21.7 0.1 1 20 35 54 35 55 0.96

3 15 7.3e-06 0.00052 20.4 2.3 1 23 68 90 68 90 0.98

4 15 9.7e-07 6.9e-05 23.2 0.3 1 23 96 118 96 118 0.99

5 15 0.00028 0.019 15.5 2.4 1 23 124 146 124 146 0.98

6 15 9.6e-06 0.00068 20.1 2.8 1 21 152 172 152 175 0.95

7 15 0.56 39 5.1 4.5 1 23 181 201 181 201 0.95

8 15 1.5e-05 0.001 19.5 1.0 3 23 209 229 208 229 0.99

9 15 4.1e-06 0.00029 21.2 1.5 1 23 235 257 235 257 0.99

10 15 0.0009 0.063 13.9 3.1 1 21 263 283 263 286 0.95

11 15 5.1 3.6e+02 2.1 0.7 1 19 292 310 292 312 0.78

12 15 7.3e-06 0.00052 20.4 2.3 1 23 377 399 377 399 0.98

13 15 9.7e-07 6.9e-05 23.2 0.3 1 23 405 427 405 427 0.99

14 15 0.025 1.7 9.3 3.2 1 23 433 455 433 455 0.98

15 15 0.066 4.6 8.0 0.6 1 13 461 473 461 474 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.6e-06	0.00025	21.4	0.8	1	23	7	29	7	29	0.98
2	15	2.9e-06	0.00021	21.7	0.1	1	20	35	54	35	55	0.96
3	15	7.3e-06	0.00052	20.4	2.3	1	23	68	90	68	90	0.98
4	15	9.7e-07	6.9e-05	23.2	0.3	1	23	96	118	96	118	0.99
5	15	0.00028	0.019	15.5	2.4	1	23	124	146	124	146	0.98
6	15	9.6e-06	0.00068	20.1	2.8	1	21	152	172	152	175	0.95
7	15	0.56	39	5.1	4.5	1	23	181	201	181	201	0.95
8	15	1.5e-05	0.001	19.5	1.0	3	23	209	229	208	229	0.99
9	15	4.1e-06	0.00029	21.2	1.5	1	23	235	257	235	257	0.99
10	15	0.0009	0.063	13.9	3.1	1	21	263	283	263	286	0.95
11	15	5.1	3.6e+02	2.1	0.7	1	19	292	310	292	312	0.78
12	15	7.3e-06	0.00052	20.4	2.3	1	23	377	399	377	399	0.98
13	15	9.7e-07	6.9e-05	23.2	0.3	1	23	405	427	405	427	0.99
14	15	0.025	1.7	9.3	3.2	1	23	433	455	433	455	0.98
15	15	0.066	4.6	8.0	0.6	1	13	461	473	461	474	0.90

Sequence Information

Coding Sequence: ATGACGACTGTGCGTAAATTCGAGTGCGATATCTGCCAGAAGAGGTTCATCGGCAGCAACGATCTGCGCAAACACAAGCGGATCCACACAGGAGAACGTCCGTACATCTGCAACGATTGCGGCAGGGGTTTCAGACAGTCGGGATCTTTGAAGAATCACATCGCTTGCAAACACTCGCCGGGGTTGCAAGGCAGGGAGATATACATATGCAACCACTGTCAGAAGGCTTTCCCGTTGAAGGAGAGGCTGAAACTGCACATGCGCACTCATACAGGCGATCGACCGTACGAATGCGAGGTCTGTCAAAAAAGGTTCGCCAGAGGAGGACAACTGATCCAACACCAAAGAACGCACACAGGCAACAAGCCTTATATCTGTAAGGTATGCGATTCTTCCTTTACTTGCTCGGCCAATTTGAAACTCCACATGAACAGGCATTTGGATATAAGAAACTTCGTGTGCGACGTTTGTGGGAAGTCGTTTTTCAGACGGGACGCTTTAAGGAAACACTTGAATTGTTACCACAAAAACGTTAAGGCGTTCCATTGTAAGATATGCGACAAAATGTTGAAAGGGCATTTGCCTCAGCATATGCGGATGCACAAGCAAGACAAACCGCATGGCTGTGCCCACTGCGGGTCGAGGTTTGCTCAGAGATCGCAGTTGACTGTCCACCAACGTATCCACAGTGGGGAGAAGCCTTATAGATGCGAAGTGTGTTGGAAGGCTTTTGCGCATTCCACTGCTCTCAAGTTGCACACGCGCAAACATACAGGAGAAAAACCGTTCAAGTGCGTTTTGTGTTCAGCGACTTTTACTCAGCTACCGCATCTCAAAAAGCACATGCTATGCGtgcacaaaagtacaaaaccgTACGTTTGCAGTTACTGTAAATCGTTCCATCAGACGAAGATGGAACTAGAGGCCCATTACGCCGAATGCAAAGATTACAAGGAACCAAAGGTGCAGGACATCGAGGTTAAGGAGAAAGTTTTAGAGCCTCCCATGCCTGTTGAGAAGATGAGATTCTTGCTGgcgattttactgaaaaagatcTCTGCACCCGAAAGACTGCAAGAATTGGGATTTGATAAGAAATTGATCGATGACGTATTGGGCTGGGAGATATACATATGCAACCACTGTCAGAAGGCTTTTCCGTTGAAGGAGAGGCTGAAACTGCACATGCGCACTCACACAGGCGATCGTCCGTACGAATGCGAGGTCTGTCAAAAGCGGTTCGCGAGAGGTGGGCAACTAATCCAGCACCAAAGAACGCACACAGGCAACAAGCCTTATATCTGTAAGGTATGCGATTCTTCCTTCACTTGCTCGGCCAACTTGAAGTTCCACATGAACAGGCATTTGGATATAAGAAACTTCGTGTGCGACGTCTGTGGAGAATCGTTTTTTAGGCGGGACGTT
Protein Sequence: MTTVRKFECDICQKRFIGSNDLRKHKRIHTGERPYICNDCGRGFRQSGSLKNHIACKHSPGLQGREIYICNHCQKAFPLKERLKLHMRTHTGDRPYECEVCQKRFARGGQLIQHQRTHTGNKPYICKVCDSSFTCSANLKLHMNRHLDIRNFVCDVCGKSFFRRDALRKHLNCYHKNVKAFHCKICDKMLKGHLPQHMRMHKQDKPHGCAHCGSRFAQRSQLTVHQRIHSGEKPYRCEVCWKAFAHSTALKLHTRKHTGEKPFKCVLCSATFTQLPHLKKHMLCVHKSTKPYVCSYCKSFHQTKMELEAHYAECKDYKEPKVQDIEVKEKVLEPPMPVEKMRFLLAILLKKISAPERLQELGFDKKLIDDVLGWEIYICNHCQKAFPLKERLKLHMRTHTGDRPYECEVCQKRFARGGQLIQHQRTHTGNKPYICKVCDSSFTCSANLKFHMNRHLDIRNFVCDVCGESFFRRDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00249171;
90% Identity: -
80% Identity: -