Cmac006231.1
Basic Information
- Insect
- Callosobruchus maculatus
- Gene Symbol
- Zfy1
- Assembly
- GCA_900659725.1
- Location
- CAACVG010006977.1:89512-118335[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.011 0.75 10.5 0.9 1 23 118 140 118 140 0.97 2 18 0.0014 0.096 13.3 0.0 1 23 146 169 146 169 0.94 3 18 0.011 0.8 10.4 0.1 2 23 175 198 175 198 0.97 4 18 0.019 1.4 9.7 0.2 2 23 205 226 204 226 0.96 5 18 0.065 4.6 8.0 0.2 2 23 242 263 242 263 0.95 6 18 2.3e-05 0.0016 18.9 1.0 1 23 292 314 292 314 0.96 7 18 6.4e-05 0.0045 17.5 1.4 1 23 320 342 320 342 0.99 8 18 0.00022 0.015 15.8 0.5 1 23 348 371 348 371 0.96 9 18 0.0028 0.2 12.3 1.5 2 23 382 404 381 404 0.94 10 18 4.5e-06 0.00032 21.1 0.6 1 23 497 522 497 522 0.92 11 18 0.00035 0.025 15.2 1.3 1 23 528 550 528 550 0.98 12 18 5e-05 0.0035 17.8 0.5 3 23 573 594 571 594 0.96 13 18 1.2e-06 8.3e-05 22.9 2.3 2 23 806 827 806 827 0.97 14 18 3.8e-05 0.0027 18.2 1.4 1 23 833 855 833 855 0.98 15 18 0.0029 0.2 12.3 0.0 2 23 863 884 862 884 0.97 16 18 0.00012 0.0084 16.6 2.1 1 23 890 913 890 913 0.91 17 18 9.2e-06 0.00065 20.1 1.3 2 23 1055 1077 1055 1077 0.96 18 18 0.069 4.9 7.9 0.2 3 23 1095 1116 1093 1116 0.97
Sequence Information
- Coding Sequence
- ATGCTGTCATCTAAGCCATCCAACATTCTAGAGGAGCACTATCATAGTCCGCCAAATGATGCAGATCAGACTGTTTTCACCAACTGTATAATTGCAGATGGTTGCAATCTGCAGTCGGATCAGAATTTCAGTATAGACCAGTTGCCTGACAGTTACATATATATTATTGATCCAGGAGTATTGCAAACAAACATTCTAGGAAATCCTTATGCGGAGAGTCAGGAACCTGCCCCTGCTTTGGACAATCCTAATATTATTGTGACTGTCCCTCCAGTACAGTTAGAAGAAACACAAGACCTACAGCTTAAATCAAACTATGAAATAATTAAGCCAAAACAAGGTTTGATAGAGtataagtgtatacagtgtcctGAGACCTTCAACTCACAAGCAAAGTATGATAAGCACCTGCTGAGGCATAAATTCAAAAAGAAATATAGCTGTACTGAATGTTCTGCAGCATTCAGTGTGGAGAACAATTTGAAGATTCATTTGGTGGTTGTGCATGAGAAGGGCGATGGAAGGTGTCCAATTTGTGGCATTAACTTGGCCTTCCAGAGGTCAGCAAGTCTAAGGTCGCATTTGATAATGCACCAGTCTGAAGAAACTCTAGTTTGTAAACAGTGCAATGCTGAATATGATAAAGAGGAAGAATACATCAAACATATGACCAGCCATTCGTCTGCAAAGAAGACGACTGCTAAGGGTACAGAGTATCCAGCAACATGCTCCTACTGTGGGCTAGAATTTGATAAAATTATCGAGTATAGGGAGCATCTTTCATATCATGCCAAACTAAACAGGCTGCTTCTGAACAGGTCAAGAAAAAAATCCCAAAAACTCACTGCGAGTACTAAGCAAACTGCCAAGGGACATATATGCTCAACATGTGGCAAAGGCTTTATTAAAAGGTCTTTGCTCGTCAGGCACGAGCGCATTCATAGCGGAGAAAGACCATTCAAGTGTGCTATGTGTGATAGTAGCTTCACGCAAAAAGGATCACTTATGATTCACTTTAGAAAGCATACCAAGGCGAAACCATTCTCGTGTGCTCTTTGTTCAgcaaaattttctcaaaaagGCAACCTAAGAGCGCATGTGTCAAAAACCCACACGAAACTCAGCAATGTTGACGAAGCCCTAAGATGCCCGCATTGCCCGTGCGTCTTCAAGCGGGTTGCCACGTTGAACGGTCACGTGACGAGGGTCCATTCGCAATCGACGCCAGAGGGCGCCATAGGAGATCGCCTCTCGCTAAAAGAGTGGGGCGTCATGGTGGAGGATGaggaggaagaagaagatgagACTGAGGAGTCGAGAGTAGTGGGAGAAGTGTTGAAAAGGCTGAAACAGTTGAACGATGGGGATACCGAGCCTGAAAACGAACGTAAAGTAGGatatgtaACTTTATCGGAATCCTTTCCGACAGACCACATTCAACAACGTATTTACCTGGTGAAGTATGAGAAAATCGATGATGTTCGGTGGTACTTTTGTGGGCTTTCAGCAAAATGTAATAAGAAATTTAAAAAGCCCTCTGATCTCATTAGGCACATTCGAGTACATACTAGAGATAAACCGTTCAAGTGTTCACTGTGCAGTGCTACGTTTACGCTGAAATCCTCTCTTGAATACCATACGATTACACATTCGTACAGTGTTTTGAAGCGAAcactcaaaacaaaaacaaaaaaatcgaaatTTGAATCGATTTTTTGTACAATGTGTGACAAAAAATTCACTGAACTTGCCATGTTGAATCGCCATATATCTACGGAGCACTATAAAAAGAAGAAGGAAGCTCTTACCAGGGGGAACAATCCAAAAGAAGTTGCCACTCAAGCAGAAATTGTATATAGTGACGTACCTCAGGAAACTACGACATATCCTGCAGGAGATCCATTTATTATTCTTAGCATGAACAACGATAACGTGACTTTGAACAACGAAGATGTTTTTCTTGATATAGGGGACTTAAAAATGCTTCAAAATTATAGCGAAACAAGTGAATGCAACAAAGGAACATTAACGGGTCTCCAAAAAAGCAACGTTGTCAATGTTCCCGTATTGGAAAACGTGCAGCAGGTTACTGATTCGGCAAACAAGGGTAACGCAGATACGGCAACCTTGGACAATACTAAAGTAATATGTATCGGTAGTGAAGGAAATATCTACTGCTTAGATGCACTTCAgaCACCTgattgtagtagtagtatagataaACCTGAACAAACTATCACTATAGATATTCCCTTGGTGAAAGGAACAGAAGTAGAattgaaagaatttaaaaaatcaaaagcaaAGTTAGTGCCACGTGAGACTCCATCACAAGTTATACAGAATGGAAGAAAAAGCATCGAACATGAAAGCGCAGAGCCGCAGCAATCAGGAAAAACGAAAAGGTCAAGAAACAGCTGTACATTCTGCacgaaatctttcaaaaaacctTCTGATTTGGAACGTCATCTGCGAACCCATACTGGCGAGCGACCATATCCCTGTACGTTGTGTGACAGTTCGTTCAAATTAAAGTCCACATTACAAAGTCATATCAAAAGACATGAGTTAAGCGAGATCAAGGTCACTTGTGGTGTATGTGGATCTTTTTTCGCTTCAGATGCGAGTCTCAAAGTGCATATGAGTATACACACTGGTCAAAAACCATATAAATGTTCATTCTGCGACAAAGTATTTCGAACAGCGAGCAATAGAAAATCTCACGAGACCCTTACACACCTTAGCACTAAGAGAAAGTCGGCTGAAGATGGAAAAGTTAAGAGAAAAGCAAAACCTACCAGCATTTTGGAAACAGTTACCATGGAGCTATTAAATGAGGTAGCGACTGAAGACAGGCAGGAAGAAGTACAGTATTTAGGCGAACAGGAAAAACATACGGAGGAGTTGCCAATTGATCCAGCTCAATCTAGAGTAGGTCCGTTAGCCACATCGACTTTGGATCTGCCCAATGAACAAAGCATTCTAATGGACCCCACAGACAATGGATTATTGCCTCAGTACCACTTAATACCATTTAATGATGTTACTCTGCTAGATTTAGATGTCAATGGAGATTATCAGGTGGTAACCCTACCCAAACAGGACGGTCTAATCCAATCAGGACTCTCCGTCATTCAAGAAACCCCTGTTAATGTCAAACCGGAATGCACGACTTGCGGTAAATGCTACGCTAGCCGAGCTGCTTTGAGACGCCACCAGAGGGAGGTACATGAGAAGAAGAAGGCGGTACCTAAAAGTGAGGGCGGGAATAGGCCGTTTGGGTGTCCCAAATGTGCTAATAGTTTTGCGATGGAACAGGGACTAAAGACGCATTTGAAGAGGATTCATGGTGATACGGTGATCTCGGATGAAACGTTTCAAGCATTGTTAGATATGGGACTTACCTTTCAAAAAGGATGCTGA
- Protein Sequence
- MLSSKPSNILEEHYHSPPNDADQTVFTNCIIADGCNLQSDQNFSIDQLPDSYIYIIDPGVLQTNILGNPYAESQEPAPALDNPNIIVTVPPVQLEETQDLQLKSNYEIIKPKQGLIEYKCIQCPETFNSQAKYDKHLLRHKFKKKYSCTECSAAFSVENNLKIHLVVVHEKGDGRCPICGINLAFQRSASLRSHLIMHQSEETLVCKQCNAEYDKEEEYIKHMTSHSSAKKTTAKGTEYPATCSYCGLEFDKIIEYREHLSYHAKLNRLLLNRSRKKSQKLTASTKQTAKGHICSTCGKGFIKRSLLVRHERIHSGERPFKCAMCDSSFTQKGSLMIHFRKHTKAKPFSCALCSAKFSQKGNLRAHVSKTHTKLSNVDEALRCPHCPCVFKRVATLNGHVTRVHSQSTPEGAIGDRLSLKEWGVMVEDEEEEEDETEESRVVGEVLKRLKQLNDGDTEPENERKVGYVTLSESFPTDHIQQRIYLVKYEKIDDVRWYFCGLSAKCNKKFKKPSDLIRHIRVHTRDKPFKCSLCSATFTLKSSLEYHTITHSYSVLKRTLKTKTKKSKFESIFCTMCDKKFTELAMLNRHISTEHYKKKKEALTRGNNPKEVATQAEIVYSDVPQETTTYPAGDPFIILSMNNDNVTLNNEDVFLDIGDLKMLQNYSETSECNKGTLTGLQKSNVVNVPVLENVQQVTDSANKGNADTATLDNTKVICIGSEGNIYCLDALQTPDCSSSIDKPEQTITIDIPLVKGTEVELKEFKKSKAKLVPRETPSQVIQNGRKSIEHESAEPQQSGKTKRSRNSCTFCTKSFKKPSDLERHLRTHTGERPYPCTLCDSSFKLKSTLQSHIKRHELSEIKVTCGVCGSFFASDASLKVHMSIHTGQKPYKCSFCDKVFRTASNRKSHETLTHLSTKRKSAEDGKVKRKAKPTSILETVTMELLNEVATEDRQEEVQYLGEQEKHTEELPIDPAQSRVGPLATSTLDLPNEQSILMDPTDNGLLPQYHLIPFNDVTLLDLDVNGDYQVVTLPKQDGLIQSGLSVIQETPVNVKPECTTCGKCYASRAALRRHQREVHEKKKAVPKSEGGNRPFGCPKCANSFAMEQGLKTHLKRIHGDTVISDETFQALLDMGLTFQKGC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -