Basic Information

Insect: Callosobruchus maculatus
Gene Symbol: -
Assembly: GCA_900659725.1
Location: CAACVG010006811.1:223296-469634[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 37 6.8e-06 0.00048 20.5 0.6 2 23 261 283 260 283 0.95

2 37 0.00091 0.064 13.8 0.5 2 23 289 311 288 311 0.95

3 37 0.0031 0.22 12.2 2.6 1 23 317 340 317 340 0.95

4 37 0.0089 0.63 10.7 3.8 1 23 346 369 346 369 0.92

5 37 2.8e-05 0.002 18.6 1.1 1 23 374 396 374 396 0.99

6 37 0.87 61 4.5 7.6 1 23 405 427 405 427 0.96

7 37 0.19 14 6.5 0.8 1 23 435 457 435 457 0.93

8 37 2.5e-05 0.0017 18.8 0.3 1 23 463 485 463 485 0.98

9 37 6.6e-07 4.7e-05 23.7 0.3 1 23 491 513 491 513 0.98

10 37 0.039 2.7 8.7 0.2 1 19 519 537 519 538 0.96

11 37 5 3.5e+02 2.1 0.2 2 23 553 575 552 575 0.89

12 37 0.012 0.83 10.3 0.0 1 23 580 603 580 603 0.94

13 37 0.25 18 6.2 0.8 1 23 613 636 613 636 0.93

14 37 2.3e-05 0.0016 18.9 3.4 1 23 640 663 640 663 0.96

15 37 0.00022 0.016 15.8 0.7 1 23 715 737 715 737 0.97

16 37 0.021 1.5 9.6 0.1 1 23 739 761 739 761 0.97

17 37 6.4 4.5e+02 1.7 0.2 1 12 767 778 767 779 0.89

18 37 0.0044 0.31 11.7 1.6 1 23 819 842 819 842 0.94

19 37 0.00041 0.029 14.9 0.2 1 22 846 867 846 867 0.97

20 37 0.0041 0.29 11.8 0.5 1 23 890 913 890 913 0.97

21 37 0.0013 0.088 13.4 1.5 2 23 917 939 916 939 0.95

22 37 1.3e-06 9.1e-05 22.8 1.1 1 23 945 967 945 967 0.97

23 37 0.0011 0.078 13.6 3.3 1 21 973 993 973 994 0.94

24 37 0.037 2.6 8.8 0.3 1 23 1014 1037 1014 1037 0.92

25 37 0.042 3 8.6 4.9 1 23 1052 1074 1052 1074 0.94

26 37 0.097 6.9 7.5 3.3 1 21 1080 1100 1080 1101 0.94

27 37 0.14 9.7 7.0 0.0 2 23 1141 1163 1140 1163 0.94

28 37 0.51 36 5.2 4.8 1 23 1168 1191 1168 1191 0.93

29 37 1.8e-05 0.0012 19.2 0.6 1 23 1197 1220 1197 1220 0.98

30 37 0.00034 0.024 15.2 0.1 1 23 1222 1245 1222 1245 0.96

31 37 0.00014 0.01 16.4 0.9 1 23 1251 1274 1251 1274 0.96

32 37 0.15 11 6.8 1.0 1 20 1302 1321 1302 1324 0.92

33 37 0.038 2.7 8.7 0.1 2 23 1425 1447 1424 1447 0.94

34 37 3.7 2.6e+02 2.5 5.7 1 21 1452 1472 1452 1475 0.87

35 37 0.00017 0.012 16.2 0.3 1 23 1481 1504 1481 1504 0.98

36 37 2e-05 0.0014 19.0 0.2 1 23 1506 1529 1506 1529 0.97

37 37 0.0015 0.1 13.2 0.6 1 23 1535 1558 1535 1558 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	37	6.8e-06	0.00048	20.5	0.6	2	23	261	283	260	283	0.95
2	37	0.00091	0.064	13.8	0.5	2	23	289	311	288	311	0.95
3	37	0.0031	0.22	12.2	2.6	1	23	317	340	317	340	0.95
4	37	0.0089	0.63	10.7	3.8	1	23	346	369	346	369	0.92
5	37	2.8e-05	0.002	18.6	1.1	1	23	374	396	374	396	0.99
6	37	0.87	61	4.5	7.6	1	23	405	427	405	427	0.96
7	37	0.19	14	6.5	0.8	1	23	435	457	435	457	0.93
8	37	2.5e-05	0.0017	18.8	0.3	1	23	463	485	463	485	0.98
9	37	6.6e-07	4.7e-05	23.7	0.3	1	23	491	513	491	513	0.98
10	37	0.039	2.7	8.7	0.2	1	19	519	537	519	538	0.96
11	37	5	3.5e+02	2.1	0.2	2	23	553	575	552	575	0.89
12	37	0.012	0.83	10.3	0.0	1	23	580	603	580	603	0.94
13	37	0.25	18	6.2	0.8	1	23	613	636	613	636	0.93
14	37	2.3e-05	0.0016	18.9	3.4	1	23	640	663	640	663	0.96
15	37	0.00022	0.016	15.8	0.7	1	23	715	737	715	737	0.97
16	37	0.021	1.5	9.6	0.1	1	23	739	761	739	761	0.97
17	37	6.4	4.5e+02	1.7	0.2	1	12	767	778	767	779	0.89
18	37	0.0044	0.31	11.7	1.6	1	23	819	842	819	842	0.94
19	37	0.00041	0.029	14.9	0.2	1	22	846	867	846	867	0.97
20	37	0.0041	0.29	11.8	0.5	1	23	890	913	890	913	0.97
21	37	0.0013	0.088	13.4	1.5	2	23	917	939	916	939	0.95
22	37	1.3e-06	9.1e-05	22.8	1.1	1	23	945	967	945	967	0.97
23	37	0.0011	0.078	13.6	3.3	1	21	973	993	973	994	0.94
24	37	0.037	2.6	8.8	0.3	1	23	1014	1037	1014	1037	0.92
25	37	0.042	3	8.6	4.9	1	23	1052	1074	1052	1074	0.94
26	37	0.097	6.9	7.5	3.3	1	21	1080	1100	1080	1101	0.94
27	37	0.14	9.7	7.0	0.0	2	23	1141	1163	1140	1163	0.94
28	37	0.51	36	5.2	4.8	1	23	1168	1191	1168	1191	0.93
29	37	1.8e-05	0.0012	19.2	0.6	1	23	1197	1220	1197	1220	0.98
30	37	0.00034	0.024	15.2	0.1	1	23	1222	1245	1222	1245	0.96
31	37	0.00014	0.01	16.4	0.9	1	23	1251	1274	1251	1274	0.96
32	37	0.15	11	6.8	1.0	1	20	1302	1321	1302	1324	0.92
33	37	0.038	2.7	8.7	0.1	2	23	1425	1447	1424	1447	0.94
34	37	3.7	2.6e+02	2.5	5.7	1	21	1452	1472	1452	1475	0.87
35	37	0.00017	0.012	16.2	0.3	1	23	1481	1504	1481	1504	0.98
36	37	2e-05	0.0014	19.0	0.2	1	23	1506	1529	1506	1529	0.97
37	37	0.0015	0.1	13.2	0.6	1	23	1535	1558	1535	1558	0.96

Sequence Information

Coding Sequence: ATGTCCAAAATTTATACTGTAGGAACATTATACATTGAATTTTATTGTATATTTGAATTTCCCGCCGAACAACCGGAAGCTCCCCACTACTGTCTGTCGACGATTTTGCTGAAACGCAACCTTCACATCCGTCCTCTTCCCATTTCGTCATCAGGCGTTCGACTAGTAGTAAAGATGGATAGTACCGCGaatattttgcaattctgtAGACTGTGTTTAGTAAAAGACGGTGTTAATATTCCAATTTTCGATGAGCAAGGTGATATTAGGCAAATATATCTTAAAATCAGTTCGTGTCTACCGGTGAAGGTAGCACGAGAGGATCACCTTCCTAAAAAAATCTGCGATGGCTGTTCAAATAAACTTGACATTTGCTACGATTTCTGGCGAACAAGCGCCGAGTCAGAGAAACAGTTGCTGGCATGGCTCGGTGCTACAGGAAAAGATGCCGCACAGGTGAACGTCAAAGAAGAAGACAACTTTGACGAACCTCTAGCTAGTGATATTTCTAAGAATGATGACGATGAGAATAAGTGCTACATGTTCGAACAGAAGGTTGAAGAGGGACCTCCTGTTGAAATCAATGATGAGCCTCCTCCGTCAAAACGACCAAGGAGGACAGCGGCAATGGAGGATGATAGCGATGAGACTGATGGAGATGACAGGGAACCTGCATTTGTGGATGTACCATCCACAAGTGCGGATGATCAACCAGGTCCCTCTGGCGTGAGCAAAGATGGATCCGACGCACCTAACTCCCGACTATTTTCAACTCCAATTCAATGTCCACAGTGCGAAAAGACATTCGAAACCAAAAGCAAACTGGCAAGACATAAACGTGGAGTCCATCGCAGTAAAGTTGTGCCGTGTGATTTTTGTGACAGAAGATTTTCTGTGAAAAGCAAAATGGAGGCTCACAGGAAAAACGTACATTTGGCAGAGTACGATCACAAATGCGACTTGTGTGAGTCTaggttcaaaaacaaatatgcTTTGGCCAGACACAAAACTATGGAACATACGAAAAACTTCGATTTCCATTGCACGCAATGCAACAAGGGATTTGTGTCAAAATGTGACCTGCGATTACACGAAGACATACAACACAATAACAAAATGTTCACTTGCGAGATCTGTTCCAAAACGTATCGCTCCAAACCAGCTTTCAAAGACCATCTGATGACCCATGATCCTAGTTACAAGAAGAAGGAGTACCACTGCAAAGAATGCTCGCTGACATTCACCCAAAAACACAGGTACTACCTGCACAAAAACGAACACATAACGGGCTGCAAGCAGCAGTACATTTGTGACGCCTGTGGTAAATCGCTGGCTTCTAGAGAGAGTTTGAGATGTCACAAAGATATGCACGATGGGGTCAAGTCTTTCAGATGCGAGGTTTGTGGGGAAGGATTCGCTAACCATGGCACTTTGGCGACTCATAGAAGGATCCATACTGGGGAGAAGCCTTACGTTTGCAGGATTTGTGGTAAACGATTCAGACAACAGCCGCCTCTTAAAATTCACATGAGGATTCATACGGGAGAAAGACCCTATCAATGCCAAATCTGCAGCATTGGCTTTATCAGCAAAACGGTGCTGAAAAGTCATAAATGGAAAATGGAAATTGAAGGCTACGATGACACGAATGACTTACAGTGTGAAGAGTGCTTTGCAGTTTTCATATGTGAAAAAGAGCTGTCTATCCATTGGAGCATAGAGCATGGTCCTAAATTGTATCCATGCAATATATGTGGATTGAAATTCATACTACCTTCAATTCTCAAAACGCACACTGAAGTTGTACACATCAAGAGCAAAAGCTTAAAGAAACTACATCAATGCTATGTATGTCTGCTCGAATTTAACACTGAAGAATTGTTGGAAGAACACCATGAATTGGTACATCCAAAAGGCTACCACTGTGGGCACTGCGGAATAGTCTTCAAATCGAAGGAAAAATTACGTCAGCATATACGAGGCAAACATATAAGCTTTGGTAATACTGAAGAAGATGAGTTGTCAAAAGTTCGACTAACAACACAACTAGATGGACTTTTGGATAACCATGAGAATAATAGATTTTCCACAAAAGCCTCAAAGTCCAAAAATAATCTGGAAATAGACAATAAAAGACCCAAATTCGTATGCAGTTTTTGTGGCAAGAATTTGTCTTCGCTATTGAACCTGAAAAAGCATATGGATTTACACAGTTTTCACTGCGATGTTTGTCCTGCTGTATACGATTCGATAGAACAATTAGCAGTTCACAAAAGGGAACATGGCGATGTGAAGCCATATATTTGCACTGTTTGCAGCATGCGTTTCAATCAGGATATAAGCGACTATAACACCGCGATGACCAGTGTCTGTAGAGTGTGCTCTATGTGTGATTTGAGAGAACACGCTCCCACCTGCTTTGGTACGTGTAAACTGACAGTCCCTCAGGGCCGGTACATATGTCAGTTCTGCGCGGAAGTCTTCAACACCAGACATTTGCTCAATAAACACGTTTCAAACAGTCACAGATCCAGATACGTTTGCAACACTTGTGGCAAACCATCGTTTTCAACAGATGCCCTTAGAAAGCATATGCAGACATGTGTGAAAAGTGATGTTGTGAATGCTGATGCCCAAAAAGATGACACACTGATTAAAGAGGAATACTTCAAATGTACAAATTGCGCCGCAGTTTACAGGTCTGAAGACGCGTTCAAAAGACACTTGGCGCGCTATCACACCCCTTGCGTGTGCGAAAAATGTGGAAAAGTATTATGTTCGTTAGACTCCCTGGAGGATCACACCGAAACTGTCCACAATGAAGCCAAACCATTCGCATGTACGATTTGTGACAAGCGTTGCAAGCGAGCGGGAGACCTCAGAATTCATATGAGGATCCATACTGGTGAAAGACCTTACAACTGTAAATTGTGCTCTAAGAGCTTTATCAACATATCGAATTTTAAAAACCACTTATGCCGTGGACCTCGTGAAGAGTCTACCGAAGGAAGCAGTGTCGAACGCGCTAAAGACAAGCAGTACAACTGTCCATTCTGCGCACAATCATTCAACTCCAAAGAGTCCGCCACATCACACGTTGCAAACAATCACAATTCCTACGAGCATATCCCTACACACAACGGAGTAAAGCGATTCCTTTGTACGGTATGTGGTAAGGGTTTTCTACGCCACCATCACCTTGTTAGACATTCAATGGTCCATACTGTCGAAAAACCGTTTCGATGTGAAACATGCCTGAAGGGTTTCGCAAGAAGAACAAGGTTGAGGCAACACAAATGCAGGGGACCGCCGGAACAGGCTAGCGCCGCCATTACTCCAAAAGGCCGTAAACGGGTTGCAATGTCTCCTTTGCCATGCCTGCAACTAAGAATTAAGCCCGAAGATGTCCAGTTACACTGGAGCTGTCCTGAATGTCTAGGAGCTTTTATCACATTAGAACAGCTGTTCAGCCATAGCCGAGAAGTTCACAGTTCCGATATGTATCATTGTGATGTGTGTAGCAAAATGTACAGAGAAATGAGGCAGCTGCACCAACATAAACAATTCGTGCACCAAACCGCACCCACCTATGAATGTTCAGAGTGTCctgaaatattcaaaacgcAAAAGCAGTTTGCTAGCCATAGGAGAATGGTTCACATATACAAGTGTAATTTATGCGGGAAGAAATTTGGACTAGCCGAAATGTTAGAGATACATAGAAAGGCGGTTCACACTAAAGAATGGTATTATGAGTGCCCACTGTGCAAAGAGATATTTAAAACAGAAGAGCAGTTGTGTGACCATCTCAAGGAGATGCACAGTCCAGTGTATCCATGTGATGTATTTGAAACCAAAACACAATTGTCTAGACATAAAGCAGCTATTCATTATACCCTAATACACCCTTGTACTGTATGCGGAATAATATTCCAGGAACCAGATAAGCTTGAACTGCATAAAAACTGTCACACAAATGAAGTACAGCATAAAAAGTTTCACACAAACGAAGAACAGCATATGATGTTTCAGACAAATGAAGAACAGCATGAAAAGTCTCACACAAACGAAGACCAGCGTATGGAGTTTCACACAAATAAAGAACAGCATAAAGAGTCTCacacaaataaacaaaagaCATCGAATGAATCAAATGAAGCTGATGCAACAAATAACGATGATCTCAAATGCCCAGATCAACGCGTTGTTGCAAACTCTTATTTGCCATGCCTGCAACTAAGAGTCAAGCCTGAAGATGTCCAGTTACATTGGAGCTGCCCTGAATGTCTCGGAACGTTCAACACATTAGAACAGCTGTTCAGCCATAGCCGAGAAGTTCACAGTTCCGATATGTATCATTGTCATCTGTGTGGGAAAATGTACCAGGAAGTGGAGAAGCTtcatcaacataaatatttcaTGCACCCAACATCACCCACCTATGAGTGTTCAGAGTGTCCCGAAGGATTCGAAACGCAGAGGCAGTTCGCTACTCATAGGAAAATGGTTCACACATACAATTGTAACATATGCGGGAAGAGATTTAGACTGGCTGAATTGTTAGAGATACATAGAAAGGTGGTTCACCCTCAAGAATGGTATTATGAATGTTCAATCTGCAATGCGATATTTAAAACAGAAGAGCAGATGTGTGAACATCTCAAAGAAATTCATAGTCCTGATGTGTATCCATGTGATGTATGCAAGGAAACGCTTCAGTTGCTCAAGGTGCAGCGACATTAA
Protein Sequence: MSKIYTVGTLYIEFYCIFEFPAEQPEAPHYCLSTILLKRNLHIRPLPISSSGVRLVVKMDSTANILQFCRLCLVKDGVNIPIFDEQGDIRQIYLKISSCLPVKVAREDHLPKKICDGCSNKLDICYDFWRTSAESEKQLLAWLGATGKDAAQVNVKEEDNFDEPLASDISKNDDDENKCYMFEQKVEEGPPVEINDEPPPSKRPRRTAAMEDDSDETDGDDREPAFVDVPSTSADDQPGPSGVSKDGSDAPNSRLFSTPIQCPQCEKTFETKSKLARHKRGVHRSKVVPCDFCDRRFSVKSKMEAHRKNVHLAEYDHKCDLCESRFKNKYALARHKTMEHTKNFDFHCTQCNKGFVSKCDLRLHEDIQHNNKMFTCEICSKTYRSKPAFKDHLMTHDPSYKKKEYHCKECSLTFTQKHRYYLHKNEHITGCKQQYICDACGKSLASRESLRCHKDMHDGVKSFRCEVCGEGFANHGTLATHRRIHTGEKPYVCRICGKRFRQQPPLKIHMRIHTGERPYQCQICSIGFISKTVLKSHKWKMEIEGYDDTNDLQCEECFAVFICEKELSIHWSIEHGPKLYPCNICGLKFILPSILKTHTEVVHIKSKSLKKLHQCYVCLLEFNTEELLEEHHELVHPKGYHCGHCGIVFKSKEKLRQHIRGKHISFGNTEEDELSKVRLTTQLDGLLDNHENNRFSTKASKSKNNLEIDNKRPKFVCSFCGKNLSSLLNLKKHMDLHSFHCDVCPAVYDSIEQLAVHKREHGDVKPYICTVCSMRFNQDISDYNTAMTSVCRVCSMCDLREHAPTCFGTCKLTVPQGRYICQFCAEVFNTRHLLNKHVSNSHRSRYVCNTCGKPSFSTDALRKHMQTCVKSDVVNADAQKDDTLIKEEYFKCTNCAAVYRSEDAFKRHLARYHTPCVCEKCGKVLCSLDSLEDHTETVHNEAKPFACTICDKRCKRAGDLRIHMRIHTGERPYNCKLCSKSFINISNFKNHLCRGPREESTEGSSVERAKDKQYNCPFCAQSFNSKESATSHVANNHNSYEHIPTHNGVKRFLCTVCGKGFLRHHHLVRHSMVHTVEKPFRCETCLKGFARRTRLRQHKCRGPPEQASAAITPKGRKRVAMSPLPCLQLRIKPEDVQLHWSCPECLGAFITLEQLFSHSREVHSSDMYHCDVCSKMYREMRQLHQHKQFVHQTAPTYECSECPEIFKTQKQFASHRRMVHIYKCNLCGKKFGLAEMLEIHRKAVHTKEWYYECPLCKEIFKTEEQLCDHLKEMHSPVYPCDVFETKTQLSRHKAAIHYTLIHPCTVCGIIFQEPDKLELHKNCHTNEVQHKKFHTNEEQHMMFQTNEEQHEKSHTNEDQRMEFHTNKEQHKESHTNKQKTSNESNEADATNNDDLKCPDQRVVANSYLPCLQLRVKPEDVQLHWSCPECLGTFNTLEQLFSHSREVHSSDMYHCHLCGKMYQEVEKLHQHKYFMHPTSPTYECSECPEGFETQRQFATHRKMVHTYNCNICGKRFRLAELLEIHRKVVHPQEWYYECSICNAIFKTEEQMCEHLKEIHSPDVYPCDVCKETLQLLKVQRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -